RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W UBP10P53874 792 aaPredicted RBP10.57□□□□□ -0.72
SFP1YLR403W ORM2Q06144 216 aa10.57□□□□□ -0.72
SFP1YLR403W MGA2P40578 1113 aa10.56□□□□□ -0.72
SFP1YLR403W YOR389WQ08912 624 aa10.56□□□□□ -0.72
SFP1YLR403W NDL1Q06568 189 aa10.56□□□□□ -0.72
SFP1YLR403W NOP14Q99207 810 aaKnown RBP10.56□□□□□ -0.72
SFP1YLR403W CLN1P20437 546 aa10.55□□□□□ -0.72
SFP1YLR403W TPS3P38426 1054 aaKnown RBP10.55□□□□□ -0.72
SFP1YLR403W CIN4P39110 191 aa10.55□□□□□ -0.72
SFP1YLR403W VPS30Q02948 557 aa10.55□□□□□ -0.72
SFP1YLR403W IMH1Q06704 911 aaKnown RBP10.55□□□□□ -0.72
SFP1YLR403W PSR1Q07800 427 aa10.55□□□□□ -0.72
SFP1YLR403W IKI3Q06706 1349 aaKnown RBP10.55□□□□□ -0.72
SFP1YLR403W RAD2P07276 1031 aa10.54□□□□□ -0.72
SFP1YLR403W NAB3P38996 802 aaKnown RBP RIP-Chip data10.54□□□□□ -0.72not detected
SFP1YLR403W VPS60Q03390 229 aa10.54□□□□□ -0.72
SFP1YLR403W MDM38Q08179 573 aa10.54□□□□□ -0.72
SFP1YLR403W SPT5P27692 1063 aaKnown RBP10.53□□□□□ -0.72
SFP1YLR403W PCT1P13259 424 aa10.53□□□□□ -0.72
SFP1YLR403W YMR1P47147 688 aaKnown RBP RIP-Chip data10.53□□□□□ -0.72not detected
SFP1YLR403W MSP1P28737 362 aa10.52□□□□□ -0.73
SFP1YLR403W SEC20P28791 383 aa10.52□□□□□ -0.73
SFP1YLR403W SWH1P35845 1188 aa10.52□□□□□ -0.73
SFP1YLR403W TPM2P40414 161 aa10.52□□□□□ -0.73
SFP1YLR403W PXR1P53335 271 aaPredicted RBP10.52□□□□□ -0.73
SFP1YLR403W ZUO1P32527 433 aaKnown RBP10.51□□□□□ -0.73
SFP1YLR403W SLP1Q12232 587 aa10.51□□□□□ -0.73
SFP1YLR403W PSO2P30620 661 aa10.51□□□□□ -0.73
SFP1YLR403W RNT1Q02555 471 aa10.51□□□□□ -0.73
SFP1YLR403W KAR3P17119 729 aa10.5□□□□□ -0.73
SFP1YLR403W TFG1P41895 735 aaPredicted RBP10.5□□□□□ -0.73
SFP1YLR403W THO2P53552 1597 aaKnown RBP10.5□□□□□ -0.73
SFP1YLR403W PSE1P32337 1089 aaKnown RBP10.49□□□□□ -0.73
SFP1YLR403W APL6P46682 809 aa10.49□□□□□ -0.73
SFP1YLR403W TY1B-DR4Q07793 1604 aa10.49□□□□□ -0.73
SFP1YLR403W ABP1P15891 592 aaKnown RBP10.49□□□□□ -0.73
SFP1YLR403W ARL1P38116 183 aaKnown RBP10.49□□□□□ -0.73
SFP1YLR403W LAM1P38851 1228 aa10.48□□□□□ -0.73
SFP1YLR403W SIT1P39980 628 aa10.48□□□□□ -0.73
SFP1YLR403W LSP1Q12230 341 aaKnown RBP10.48□□□□□ -0.73
SFP1YLR403W CLF1Q12309 687 aaPredicted RBP10.48□□□□□ -0.73
SFP1YLR403W RAD3P06839 778 aa10.48□□□□□ -0.73
SFP1YLR403W ASF1P32447 279 aa10.48□□□□□ -0.73
SFP1YLR403W PSD2P53037 1138 aaKnown RBP10.48□□□□□ -0.73
SFP1YLR403W YOL087CQ99247 1116 aa10.48□□□□□ -0.73
SFP1YLR403W YDR341CQ05506 607 aaKnown RBP10.47□□□□□ -0.73
SFP1YLR403W UTP13Q05946 817 aaKnown RBP10.47□□□□□ -0.73
SFP1YLR403W PUS1Q12211 544 aaKnown RBP10.47□□□□□ -0.73
SFP1YLR403W SPB4P25808 606 aaPredicted RBP10.46□□□□□ -0.73
SFP1YLR403W CEF1Q03654 590 aaPredicted RBP10.46□□□□□ -0.73
SFP1YLR403W ARR1Q06596 294 aa10.46□□□□□ -0.73
SFP1YLR403W SPT6P23615 1451 aaKnown RBP10.46□□□□□ -0.73
SFP1YLR403W KEX2P13134 814 aa10.46□□□□□ -0.74
SFP1YLR403W YKR023WP36119 530 aaKnown RBP10.46□□□□□ -0.74
SFP1YLR403W RTT106P40161 455 aa10.46□□□□□ -0.74
SFP1YLR403W RPL5P26321 297 aaKnown RBP10.45□□□□□ -0.74
SFP1YLR403W KIP3P53086 805 aaKnown RBP10.45□□□□□ -0.74
SFP1YLR403W GLE1Q12315 538 aa10.45□□□□□ -0.74
SFP1YLR403W JSN1P47135 1091 aaKnown RBP RIP-Chip data10.45□□□□□ -0.74not detected
SFP1YLR403W SEC39Q12745 709 aa10.45□□□□□ -0.74
SFP1YLR403W GCD6P32501 712 aaKnown RBP10.44□□□□□ -0.74
SFP1YLR403W VPS24P36095 224 aaKnown RBP10.44□□□□□ -0.74
SFP1YLR403W NPR3P38742 1146 aa10.44□□□□□ -0.74
SFP1YLR403W TCD1P38756 429 aa10.44□□□□□ -0.74
SFP1YLR403W PKH1Q03407 766 aa10.44□□□□□ -0.74
SFP1YLR403W RRB1Q04225 511 aaKnown RBP10.43□□□□□ -0.74
SFP1YLR403W IAH1P41734 238 aa10.43□□□□□ -0.74
SFP1YLR403W YNL050CP53952 270 aa10.43□□□□□ -0.74
SFP1YLR403W PEX19Q07418 342 aa10.43□□□□□ -0.74
SFP1YLR403W SSM4P40318 1319 aa10.42□□□□□ -0.74
SFP1YLR403W RIX7Q07844 837 aaKnown RBP10.42□□□□□ -0.74
SFP1YLR403W JJJ1P53863 590 aa10.42□□□□□ -0.74
SFP1YLR403W LAM6Q08001 693 aa10.42□□□□□ -0.74
SFP1YLR403W YGL140CP53120 1219 aa10.41□□□□□ -0.74
SFP1YLR403W NOP7P53261 605 aaKnown RBP10.41□□□□□ -0.74
SFP1YLR403W YMR102CQ03177 834 aa10.41□□□□□ -0.74
SFP1YLR403W VPS27P40343 622 aaKnown RBP10.4□□□□□ -0.74
SFP1YLR403W NUF2P33895 451 aa10.4□□□□□ -0.75
SFP1YLR403W TRM3Q07527 1436 aa10.39□□□□□ -0.75
SFP1YLR403W BRF1P29056 596 aa10.39□□□□□ -0.75
SFP1YLR403W TAF1P46677 1066 aa10.39□□□□□ -0.75
SFP1YLR403W HUL5P53119 910 aa10.39□□□□□ -0.75
SFP1YLR403W HOS3Q02959 697 aaKnown RBP10.39□□□□□ -0.75
SFP1YLR403W IRC20Q06554 1556 aa10.39□□□□□ -0.75
SFP1YLR403W OLA1P38219 394 aaKnown RBP10.38□□□□□ -0.75
SFP1YLR403W OSW7P43611 510 aa10.38□□□□□ -0.75
SFP1YLR403W DNM1P54861 757 aa10.38□□□□□ -0.75
SFP1YLR403W RAD16P31244 790 aa10.38□□□□□ -0.75
SFP1YLR403W BEM4P39011 633 aa10.38□□□□□ -0.75
SFP1YLR403W NDC80P40460 691 aa10.38□□□□□ -0.75
SFP1YLR403W BUD21Q08492 214 aaPredicted RBP10.38□□□□□ -0.75
SFP1YLR403W SSA4P22202 642 aaKnown RBP10.37□□□□□ -0.75
SFP1YLR403W DPH5P32469 300 aaPredicted RBP10.37□□□□□ -0.75
SFP1YLR403W TAF2P23255 1407 aa10.37□□□□□ -0.75
SFP1YLR403W SMC4Q12267 1418 aa10.36□□□□□ -0.75
SFP1YLR403W SSP1P38871 571 aa10.36□□□□□ -0.75
SFP1YLR403W SEC27P41811 889 aaKnown RBP10.36□□□□□ -0.75
SFP1YLR403W PSK2Q08217 1101 aa10.36□□□□□ -0.75
SFP1YLR403W RAD9P14737 1309 aa10.36□□□□□ -0.75
SFP1YLR403W UBP1P25037 809 aa10.35□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms