RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	KIP3	P53086	805 aa	Known RBP	4.99	□□□□□ -1.61
YSH1	YLR277C	YMR196W	Q04336	1088 aa		4.99	□□□□□ -1.61
YSH1	YLR277C	CLC1	P17891	233 aa		4.98	□□□□□ -1.61
YSH1	YLR277C	RTS3	P53289	263 aa		4.98	□□□□□ -1.61
YSH1	YLR277C	ECM16	Q04217	1267 aa	Known RBP	4.98	□□□□□ -1.61
YSH1	YLR277C	FAR11	P53917	953 aa		4.97	□□□□□ -1.61
YSH1	YLR277C	SEC20	P28791	383 aa		4.97	□□□□□ -1.61
YSH1	YLR277C	RRP14	P36080	434 aa	Known RBP	4.97	□□□□□ -1.61
YSH1	YLR277C	SAP30	P38429	201 aa		4.97	□□□□□ -1.61
YSH1	YLR277C	LEM3	P42838	414 aa		4.97	□□□□□ -1.61
YSH1	YLR277C	YDL129W	Q07555	291 aa		4.96	□□□□□ -1.61
YSH1	YLR277C	NOP8	Q08287	484 aa	Predicted RBP	4.96	□□□□□ -1.62
YSH1	YLR277C	CDC11	P32458	415 aa		4.95	□□□□□ -1.62
YSH1	YLR277C	GEF1	P37020	779 aa		4.95	□□□□□ -1.62
YSH1	YLR277C	ZDS1	P50111	915 aa	Known RBP	4.95	□□□□□ -1.62
YSH1	YLR277C	RPN7	Q06103	429 aa	Known RBP	4.95	□□□□□ -1.62
YSH1	YLR277C	MSH3	P25336	1018 aa		4.95	□□□□□ -1.62
YSH1	YLR277C	HOS4	P40480	1083 aa		4.95	□□□□□ -1.62
YSH1	YLR277C	CEF1	Q03654	590 aa	Predicted RBP	4.95	□□□□□ -1.62
YSH1	YLR277C	BRE1	Q07457	700 aa	Known RBP	4.95	□□□□□ -1.62
YSH1	YLR277C	SUP35	P05453	685 aa	Known RBP	4.94	□□□□□ -1.62
YSH1	YLR277C	PDR1	P12383	1068 aa		4.94	□□□□□ -1.62
YSH1	YLR277C	SSF1	P38789	453 aa	Predicted RBP	4.94	□□□□□ -1.62
YSH1	YLR277C	YJR008W	P47085	338 aa		4.94	□□□□□ -1.62
YSH1	YLR277C	NST1	P53935	1240 aa		4.94	□□□□□ -1.62
YSH1	YLR277C	MSH4	P40965	878 aa	Predicted RBP	4.94	□□□□□ -1.62
YSH1	YLR277C	YML020W	Q03722	664 aa		4.94	□□□□□ -1.62
YSH1	YLR277C	APL5	Q08951	932 aa	Known RBP	4.94	□□□□□ -1.62
YSH1	YLR277C	CFT2	Q12102	859 aa	Predicted RBP	4.94	□□□□□ -1.62
YSH1	YLR277C	HSC82	P15108	705 aa	Known RBP	4.93	□□□□□ -1.62
YSH1	YLR277C	DJP1	P40564	432 aa		4.93	□□□□□ -1.62
YSH1	YLR277C	PKH1	Q03407	766 aa		4.93	□□□□□ -1.62
YSH1	YLR277C	RAD51	P25454	400 aa		4.92	□□□□□ -1.62
YSH1	YLR277C	MTR4	P47047	1073 aa	Known RBP	4.92	□□□□□ -1.62
YSH1	YLR277C	RCF1	Q03713	159 aa		4.92	□□□□□ -1.62
YSH1	YLR277C	RAD2	P07276	1031 aa		4.92	□□□□□ -1.62
YSH1	YLR277C	RPT2	P40327	437 aa	Known RBP	4.92	□□□□□ -1.62
YSH1	YLR277C	AIM21	P40563	679 aa		4.92	□□□□□ -1.62
YSH1	YLR277C	PSK2	Q08217	1101 aa		4.92	□□□□□ -1.62
YSH1	YLR277C	SAP190	P36123	1033 aa		4.91	□□□□□ -1.62
YSH1	YLR277C	SIC1	P38634	284 aa		4.91	□□□□□ -1.62
YSH1	YLR277C	RSC8	P43609	557 aa	Known RBP	4.91	□□□□□ -1.62
YSH1	YLR277C	TY4A-J	P47023	414 aa		4.91	□□□□□ -1.62
YSH1	YLR277C	PML39	Q03760	334 aa		4.91	□□□□□ -1.62
YSH1	YLR277C	YLL054C	Q12244	843 aa		4.91	□□□□□ -1.62
YSH1	YLR277C	SSA4	P22202	642 aa	Known RBP	4.91	□□□□□ -1.62
YSH1	YLR277C	PIM1	P36775	1133 aa		4.91	□□□□□ -1.62
YSH1	YLR277C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
YSH1	YLR277C	AIM20	P40451	204 aa		4.91	□□□□□ -1.62
YSH1	YLR277C	CKB1	P43639	278 aa		4.91	□□□□□ -1.62
YSH1	YLR277C	LTV1	P34078	463 aa		4.9	□□□□□ -1.62
YSH1	YLR277C	SPC42	P36094	363 aa		4.9	□□□□□ -1.62
YSH1	YLR277C	SOL3	P38858	249 aa		4.9	□□□□□ -1.62
YSH1	YLR277C	VPS70	P47161	811 aa		4.9	□□□□□ -1.62
YSH1	YLR277C	DEP1	P31385	405 aa		4.9	□□□□□ -1.63
YSH1	YLR277C	CLF1	Q12309	687 aa	Predicted RBP	4.9	□□□□□ -1.63
YSH1	YLR277C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
YSH1	YLR277C	TAF1	P46677	1066 aa		4.89	□□□□□ -1.63
YSH1	YLR277C	YDR341C	Q05506	607 aa	Known RBP	4.89	□□□□□ -1.63
YSH1	YLR277C	GDE1	Q02979	1223 aa		4.89	□□□□□ -1.63
YSH1	YLR277C	PRP3	Q03338	469 aa	Predicted RBP	4.89	□□□□□ -1.63
YSH1	YLR277C	VPS5	Q92331	675 aa		4.89	□□□□□ -1.63
YSH1	YLR277C	AI4	P03878	556 aa		4.88	□□□□□ -1.63
YSH1	YLR277C	PET111	P08468	800 aa		4.88	□□□□□ -1.63
YSH1	YLR277C	MPH3	P0CE00	602 aa		4.88	□□□□□ -1.63
YSH1	YLR277C	GAL11	P19659	1081 aa		4.88	□□□□□ -1.63
YSH1	YLR277C	IME2	P32581	645 aa		4.88	□□□□□ -1.63
YSH1	YLR277C	TAN1	P53072	289 aa	Predicted RBP	4.88	□□□□□ -1.63
YSH1	YLR277C	MEH1	Q02205	184 aa		4.88	□□□□□ -1.63
YSH1	YLR277C	YGR273C	P53329	174 aa		4.88	□□□□□ -1.63
YSH1	YLR277C	GIR2	Q03768	265 aa	Predicted RBP	4.88	□□□□□ -1.63
YSH1	YLR277C	CHL1	P22516	861 aa	Predicted RBP	4.87	□□□□□ -1.63
YSH1	YLR277C	PRE3	P38624	215 aa		4.87	□□□□□ -1.63
YSH1	YLR277C	NMD3	P38861	518 aa	Known RBP	4.87	□□□□□ -1.63
YSH1	YLR277C	RAD26	P40352	1085 aa		4.87	□□□□□ -1.63
YSH1	YLR277C	YLR257W	Q06146	321 aa	Known RBP	4.87	□□□□□ -1.63
YSH1	YLR277C	IMH1	Q06704	911 aa	Known RBP	4.87	□□□□□ -1.63
YSH1	YLR277C	RIX7	Q07844	837 aa	Known RBP	4.87	□□□□□ -1.63
YSH1	YLR277C	OPY1	P38271	328 aa		4.86	□□□□□ -1.63
YSH1	YLR277C	PEX29	Q03370	554 aa		4.86	□□□□□ -1.63
YSH1	YLR277C	PSR1	Q07800	427 aa		4.86	□□□□□ -1.63
YSH1	YLR277C	SPB4	P25808	606 aa	Predicted RBP	4.85	□□□□□ -1.63
YSH1	YLR277C	BYE1	P36106	594 aa		4.85	□□□□□ -1.63
YSH1	YLR277C	UBP14	P38237	781 aa	Known RBP	4.85	□□□□□ -1.63
YSH1	YLR277C	ILV3	P39522	585 aa	Known RBP	4.85	□□□□□ -1.63
YSH1	YLR277C	SEC27	P41811	889 aa	Known RBP	4.85	□□□□□ -1.63
YSH1	YLR277C	MID1	P41821	548 aa		4.85	□□□□□ -1.63
YSH1	YLR277C	VID30	P53076	958 aa		4.85	□□□□□ -1.63
YSH1	YLR277C	ALD3	P54114	506 aa		4.85	□□□□□ -1.63
YSH1	YLR277C	ELP4	Q02884	456 aa	Known RBP	4.85	□□□□□ -1.63
YSH1	YLR277C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
YSH1	YLR277C	SGS1	P35187	1447 aa		4.85	□□□□□ -1.63
YSH1	YLR277C	RPC82	P32349	654 aa		4.85	□□□□□ -1.63
YSH1	YLR277C	MPE1	P35728	441 aa	Known RBP	4.85	□□□□□ -1.63
YSH1	YLR277C	DSF2	P38213	736 aa		4.85	□□□□□ -1.63
YSH1	YLR277C	CTR9	P89105	1077 aa		4.85	□□□□□ -1.63
YSH1	YLR277C	RPA135	P22138	1203 aa	Known RBP	4.84	□□□□□ -1.63
YSH1	YLR277C	PAP2	P53632	584 aa	Known RBP	4.84	□□□□□ -1.63
YSH1	YLR277C	YDR090C	Q03193	310 aa		4.84	□□□□□ -1.63
YSH1	YLR277C	NFI1	Q12216	726 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms