RNA–Protein interactions for RNA: YLR171W

YLR171W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR171W, Length 390 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR171WYLR171W TY1A-GR3P0CX67 440 aa6.7□□□□□ -1.34
YLR171WYLR171W TY1A-LR1P0CX68 440 aa6.7□□□□□ -1.34
YLR171WYLR171W TY1A-MR2P0CX69 440 aa6.7□□□□□ -1.34
YLR171WYLR171W SDH2P21801 266 aa6.7□□□□□ -1.34
YLR171WYLR171W TY1A-JR2P47099 440 aa6.7□□□□□ -1.34
YLR171WYLR171W TY1A-DR1Q03856 440 aa6.7□□□□□ -1.34
YLR171WYLR171W TY1A-ML1Q04706 440 aaKnown RBP6.7□□□□□ -1.34
YLR171WYLR171W TY1A-BRQ12217 440 aa6.7□□□□□ -1.34
YLR171WYLR171W TY1A-NL2Q12470 440 aa6.7□□□□□ -1.34
YLR171WYLR171W TY1A-GR2Q12485 440 aa6.7□□□□□ -1.34
YLR171WYLR171W SEC2P17065 759 aa6.69□□□□□ -1.34
YLR171WYLR171W CLB5P30283 435 aa6.68□□□□□ -1.34
YLR171WYLR171W KEX2P13134 814 aa6.67□□□□□ -1.34
YLR171WYLR171W TEA1P47988 759 aa6.67□□□□□ -1.34
YLR171WYLR171W AMS1P22855 1083 aa6.66□□□□□ -1.34
YLR171WYLR171W MRF1P30775 413 aaPredicted RBP6.66□□□□□ -1.34
YLR171WYLR171W ERF2Q06551 359 aa6.66□□□□□ -1.34
YLR171WYLR171W SPT16P32558 1035 aaKnown RBP6.64□□□□□ -1.35
YLR171WYLR171W RRN7P40992 514 aa6.63□□□□□ -1.35
YLR171WYLR171W YEL077CQ3E7X8 1277 aa6.63□□□□□ -1.35
YLR171WYLR171W ERG12P07277 443 aa6.62□□□□□ -1.35
YLR171WYLR171W NIS1P53939 407 aa6.61□□□□□ -1.35
YLR171WYLR171W SRC1Q03707 834 aa6.61□□□□□ -1.35
YLR171WYLR171W PAT1P25644 796 aaKnown RBP6.59□□□□□ -1.35
YLR171WYLR171W SIT4P20604 311 aa6.58□□□□□ -1.36
YLR171WYLR171W ATF2P53296 535 aa6.58□□□□□ -1.36
YLR171WYLR171W YNR021WP53723 404 aaKnown RBP6.58□□□□□ -1.36
YLR171WYLR171W YNL115CP53925 644 aa6.58□□□□□ -1.36
YLR171WYLR171W GLC3P32775 704 aa6.57□□□□□ -1.36
YLR171WYLR171W CST6P40535 587 aa6.57□□□□□ -1.36
YLR171WYLR171W RTF1P53064 558 aa6.57□□□□□ -1.36
YLR171WYLR171W FPK1P53739 893 aa6.56□□□□□ -1.36
YLR171WYLR171W PAC1P39946 494 aaKnown RBP6.55□□□□□ -1.36
YLR171WYLR171W TUB4P53378 473 aa6.55□□□□□ -1.36
YLR171WYLR171W YMR196WQ04336 1088 aa6.55□□□□□ -1.36
YLR171WYLR171W FRK1Q03002 865 aaPredicted RBP6.54□□□□□ -1.36
YLR171WYLR171W AGE1Q04412 482 aa6.54□□□□□ -1.36
YLR171WYLR171W BDP1P46678 594 aa6.52□□□□□ -1.37
YLR171WYLR171W LAM6Q08001 693 aa6.52□□□□□ -1.37
YLR171WYLR171W SLY41P22215 453 aa6.51□□□□□ -1.37
YLR171WYLR171W SCJ1P25303 377 aa6.51□□□□□ -1.37
YLR171WYLR171W TRK1P12685 1235 aa6.5□□□□□ -1.37
YLR171WYLR171W CLA4P48562 842 aa6.5□□□□□ -1.37
YLR171WYLR171W AIR1P40507 360 aaKnown RBP6.48□□□□□ -1.37
YLR171WYLR171W HST2P53686 357 aa6.48□□□□□ -1.37
YLR171WYLR171W MOD5P07884 428 aa6.47□□□□□ -1.37
YLR171WYLR171W AIM7Q12156 149 aa6.47□□□□□ -1.37
YLR171WYLR171W MMP1Q12372 583 aa6.47□□□□□ -1.37
YLR171WYLR171W GLN1P32288 370 aaKnown RBP6.46□□□□□ -1.38
YLR171WYLR171W LEU3P08638 886 aa6.45□□□□□ -1.38
YLR171WYLR171W TYW1Q08960 810 aaKnown RBP6.45□□□□□ -1.38
YLR171WYLR171W ESS1P22696 170 aa6.44□□□□□ -1.38
YLR171WYLR171W KXD1P53158 218 aa6.44□□□□□ -1.38
YLR171WYLR171W PUS6P53294 404 aa6.44□□□□□ -1.38
YLR171WYLR171W PUS5Q06244 254 aa6.44□□□□□ -1.38
YLR171WYLR171W TBF1Q02457 562 aa6.42□□□□□ -1.38
YLR171WYLR171W PDC1P06169 563 aaKnown RBP6.41□□□□□ -1.38
YLR171WYLR171W TRM1P15565 570 aaKnown RBP6.41□□□□□ -1.38
YLR171WYLR171W YJU3P28321 313 aa6.41□□□□□ -1.38
YLR171WYLR171W HED1Q03937 162 aa6.41□□□□□ -1.38
YLR171WYLR171W YDL206WQ12424 762 aa6.41□□□□□ -1.38
YLR171WYLR171W KTR1P27810 393 aaKnown RBP6.4□□□□□ -1.38
YLR171WYLR171W HXT10P43581 546 aa6.4□□□□□ -1.38
YLR171WYLR171W CDC4P07834 779 aa6.39□□□□□ -1.39
YLR171WYLR171W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
YLR171WYLR171W CSN12P47130 423 aa6.39□□□□□ -1.39
YLR171WYLR171W KIN1P13185 1064 aa6.38□□□□□ -1.39
YLR171WYLR171W TPD3P31383 635 aa6.38□□□□□ -1.39
YLR171WYLR171W RRD1P40454 393 aaKnown RBP6.38□□□□□ -1.39
YLR171WYLR171W RPA14P50106 137 aa6.38□□□□□ -1.39
YLR171WYLR171W ALR1Q08269 859 aa6.38□□□□□ -1.39
YLR171WYLR171W PKH3Q03306 898 aaPredicted RBP6.37□□□□□ -1.39
YLR171WYLR171W YPR097WQ06839 1073 aa6.37□□□□□ -1.39
YLR171WYLR171W RPN1P38764 993 aaKnown RBP6.36□□□□□ -1.39
YLR171WYLR171W MET32Q12041 191 aa6.35□□□□□ -1.39
YLR171WYLR171W RSC30P38781 883 aa6.34□□□□□ -1.39
YLR171WYLR171W BRE2P43132 505 aa6.34□□□□□ -1.39
YLR171WYLR171W ARG8P18544 423 aa6.33□□□□□ -1.4
YLR171WYLR171W ASH1P34233 588 aa6.32□□□□□ -1.4
YLR171WYLR171W GCR2Q01722 534 aa6.32□□□□□ -1.4
YLR171WYLR171W SYH1Q02875 849 aaKnown RBP6.32□□□□□ -1.4
YLR171WYLR171W KIP2P28743 706 aa6.31□□□□□ -1.4
YLR171WYLR171W HST3P53687 447 aa6.3□□□□□ -1.4
YLR171WYLR171W AFT1P22149 690 aa6.29□□□□□ -1.4
YLR171WYLR171W IXR1P33417 597 aa6.29□□□□□ -1.4
YLR171WYLR171W RAD59Q12223 238 aa6.29□□□□□ -1.4
YLR171WYLR171W SSA2P10592 639 aaKnown RBP6.28□□□□□ -1.4
YLR171WYLR171W GUA1P38625 525 aaKnown RBP6.28□□□□□ -1.4
YLR171WYLR171W VAC17P25591 423 aa6.25□□□□□ -1.41
YLR171WYLR171W ITT1Q04638 464 aa6.23□□□□□ -1.41
YLR171WYLR171W YJR115WP47152 169 aa6.22□□□□□ -1.41
YLR171WYLR171W GAR1P28007 205 aaKnown RBP6.21□□□□□ -1.42
YLR171WYLR171W MRT4P33201 236 aaKnown RBP6.21□□□□□ -1.42
YLR171WYLR171W UGA3P26370 528 aa6.2□□□□□ -1.42
YLR171WYLR171W MET22P32179 357 aa6.2□□□□□ -1.42
YLR171WYLR171W FIG4P42837 879 aa6.2□□□□□ -1.42
YLR171WYLR171W MSB3P48566 633 aaPredicted RBP6.2□□□□□ -1.42
YLR171WYLR171W APP1P53933 587 aa6.18□□□□□ -1.42
YLR171WYLR171W MAK16P10962 306 aaPredicted RBP6.17□□□□□ -1.42
YLR171WYLR171W HPC2Q01448 625 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms