RNA–Protein interactions for RNA: YGL113W

SLD3, Transcript of Protein involved in the initiation of DNA replication, yeastyeast

Gene SLD3, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD3YGL113W PBS2P08018 668 aa3.48□□□□□ -1.85
SLD3YGL113W RGR1P19263 1082 aa3.48□□□□□ -1.85
SLD3YGL113W TRK2P28584 889 aa3.48□□□□□ -1.85
SLD3YGL113W NUD1P32336 851 aa3.47□□□□□ -1.85
SLD3YGL113W TY1A-DR4O74302 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-HP0C2I4 478 aaKnown RBP3.46□□□□□ -1.86
SLD3YGL113W TY1A-AP0CX57 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-PR1P0CX58 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-ORP0CX59 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-PR2P0CX60 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-DR5P0CX65 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-ER2P0CX66 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-GR3P0CX67 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-LR1P0CX68 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-MR2P0CX69 440 aa3.46□□□□□ -1.86
SLD3YGL113W LSB3P43603 459 aaKnown RBP3.46□□□□□ -1.86
SLD3YGL113W TY1A-JR2P47099 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-DR1Q03856 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-ML1Q04706 440 aaKnown RBP3.46□□□□□ -1.86
SLD3YGL113W TY1A-BRQ12217 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-NL2Q12470 440 aa3.46□□□□□ -1.86
SLD3YGL113W TY1A-GR2Q12485 440 aa3.46□□□□□ -1.86
SLD3YGL113W SEC2P17065 759 aa3.46□□□□□ -1.86
SLD3YGL113W CKB1P43639 278 aa3.46□□□□□ -1.86
SLD3YGL113W YPR109WQ06104 294 aa3.45□□□□□ -1.86
SLD3YGL113W PRT1P06103 763 aaKnown RBP3.44□□□□□ -1.86
SLD3YGL113W NPL4P33755 580 aa3.44□□□□□ -1.86
SLD3YGL113W DSF2P38213 736 aa3.43□□□□□ -1.86
SLD3YGL113W IES2P40154 320 aa3.43□□□□□ -1.86
SLD3YGL113W NUP42P49686 430 aaKnown RBP3.43□□□□□ -1.86
SLD3YGL113W ERF2Q06551 359 aa3.43□□□□□ -1.86
SLD3YGL113W PUS1Q12211 544 aaKnown RBP3.43□□□□□ -1.86
SLD3YGL113W CST6P40535 587 aa3.42□□□□□ -1.86
SLD3YGL113W MAM3Q12296 706 aa3.42□□□□□ -1.86
SLD3YGL113W PSE1P32337 1089 aaKnown RBP3.41□□□□□ -1.86
SLD3YGL113W YGR035CP53222 116 aa3.41□□□□□ -1.86
SLD3YGL113W KEX2P13134 814 aa3.41□□□□□ -1.86
SLD3YGL113W GCD11P32481 527 aaKnown RBP3.41□□□□□ -1.86
SLD3YGL113W DIT2P21595 489 aa3.39□□□□□ -1.87
SLD3YGL113W ICP55P40051 511 aa3.39□□□□□ -1.87
SLD3YGL113W RRN7P40992 514 aa3.39□□□□□ -1.87
SLD3YGL113W CAF120P53836 1060 aa3.37□□□□□ -1.87
SLD3YGL113W AGE1Q04412 482 aa3.37□□□□□ -1.87
SLD3YGL113W LAM6Q08001 693 aa3.37□□□□□ -1.87
SLD3YGL113W SPB4P25808 606 aaPredicted RBP3.37□□□□□ -1.87
SLD3YGL113W SPT16P32558 1035 aaKnown RBP3.37□□□□□ -1.87
SLD3YGL113W PAC1P39946 494 aaKnown RBP3.37□□□□□ -1.87
SLD3YGL113W RRD1P40454 393 aaKnown RBP3.36□□□□□ -1.87
SLD3YGL113W PAT1P25644 796 aaKnown RBP3.36□□□□□ -1.87
SLD3YGL113W NIS1P53939 407 aa3.36□□□□□ -1.87
SLD3YGL113W FRK1Q03002 865 aaPredicted RBP3.36□□□□□ -1.87
SLD3YGL113W SIT4P20604 311 aa3.35□□□□□ -1.87
SLD3YGL113W CLB5P30283 435 aa3.35□□□□□ -1.87
SLD3YGL113W BDP1P46678 594 aa3.35□□□□□ -1.87
SLD3YGL113W TUB4P53378 473 aa3.34□□□□□ -1.87
SLD3YGL113W MOD5P07884 428 aa3.34□□□□□ -1.88
SLD3YGL113W TEA1P47988 759 aa3.34□□□□□ -1.88
SLD3YGL113W RTF1P53064 558 aa3.32□□□□□ -1.88
SLD3YGL113W YNL115CP53925 644 aa3.32□□□□□ -1.88
SLD3YGL113W YPR204WQ08995 1032 aa3.32□□□□□ -1.88
SLD3YGL113W ASH1P34233 588 aa3.32□□□□□ -1.88
SLD3YGL113W HST3P53687 447 aa3.32□□□□□ -1.88
SLD3YGL113W FPK1P53739 893 aa3.32□□□□□ -1.88
SLD3YGL113W HED1Q03937 162 aa3.32□□□□□ -1.88
SLD3YGL113W ACO2P39533 789 aa3.31□□□□□ -1.88
SLD3YGL113W SCJ1P25303 377 aa3.3□□□□□ -1.88
SLD3YGL113W PUS5Q06244 254 aa3.3□□□□□ -1.88
SLD3YGL113W GLC3P32775 704 aa3.29□□□□□ -1.88
SLD3YGL113W SLY41P22215 453 aa3.28□□□□□ -1.88
SLD3YGL113W MET32Q12041 191 aa3.28□□□□□ -1.88
SLD3YGL113W PHM7Q12252 991 aa3.27□□□□□ -1.89
SLD3YGL113W PDC1P06169 563 aaKnown RBP3.27□□□□□ -1.89
SLD3YGL113W AFT1P22149 690 aa3.27□□□□□ -1.89
SLD3YGL113W HST2P53686 357 aa3.27□□□□□ -1.89
SLD3YGL113W YNR021WP53723 404 aaKnown RBP3.27□□□□□ -1.89
SLD3YGL113W HPF1Q05164 967 aa3.27□□□□□ -1.89
SLD3YGL113W YMR196WQ04336 1088 aa3.26□□□□□ -1.89
SLD3YGL113W TPD3P31383 635 aa3.26□□□□□ -1.89
SLD3YGL113W TYW1Q08960 810 aaKnown RBP3.26□□□□□ -1.89
SLD3YGL113W TRM1P15565 570 aaKnown RBP3.25□□□□□ -1.89
SLD3YGL113W ESS1P22696 170 aa3.25□□□□□ -1.89
SLD3YGL113W KTR1P27810 393 aaKnown RBP3.25□□□□□ -1.89
SLD3YGL113W HXT10P43581 546 aa3.25□□□□□ -1.89
SLD3YGL113W ATF2P53296 535 aa3.25□□□□□ -1.89
SLD3YGL113W YDL206WQ12424 762 aa3.25□□□□□ -1.89
SLD3YGL113W YJU3P28321 313 aa3.24□□□□□ -1.89
SLD3YGL113W MMP1Q12372 583 aa3.24□□□□□ -1.89
SLD3YGL113W RQC2Q12532 1038 aaKnown RBP3.24□□□□□ -1.89
SLD3YGL113W KXD1P53158 218 aa3.24□□□□□ -1.89
SLD3YGL113W PUS6P53294 404 aa3.24□□□□□ -1.89
SLD3YGL113W RPA14P50106 137 aa3.23□□□□□ -1.89
SLD3YGL113W YPR097WQ06839 1073 aa3.23□□□□□ -1.89
SLD3YGL113W SBP1P10080 294 aaKnown RBP3.22□□□□□ -1.89
SLD3YGL113W GLN1P32288 370 aaKnown RBP3.22□□□□□ -1.89
SLD3YGL113W RSC30P38781 883 aa3.22□□□□□ -1.89
SLD3YGL113W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SLD3YGL113W YJR115WP47152 169 aa3.22□□□□□ -1.89
SLD3YGL113W TBF1Q02457 562 aa3.22□□□□□ -1.89
SLD3YGL113W AIM7Q12156 149 aa3.22□□□□□ -1.89
SLD3YGL113W YLR346CQ06139 101 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms