RNA–Protein interactions for RNA: YGL113W

SLD3, Transcript of Protein involved in the initiation of DNA replication, yeastyeast

Gene SLD3, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD3YGL113W FAP1P53971 965 aa8.61□□□□□ -1.03
SLD3YGL113W PRY3P47033 881 aa8.13□□□□□ -1.11
SLD3YGL113W HAA1Q12753 694 aaKnown RBP7.55□□□□□ -1.2
SLD3YGL113W YCK3P39962 524 aa7.45□□□□□ -1.22
SLD3YGL113W AAD16Q02895 342 aa7.35□□□□□ -1.23
SLD3YGL113W MTC1P47018 478 aaKnown RBP7.31□□□□□ -1.24
SLD3YGL113W PRI1P10363 409 aa7.12□□□□□ -1.27
SLD3YGL113W BUD31P25337 157 aaPredicted RBP6.84□□□□□ -1.31
SLD3YGL113W YGL015CP33199 130 aa6.69□□□□□ -1.34
SLD3YGL113W TSR3Q12094 313 aaKnown RBP6.66□□□□□ -1.34
SLD3YGL113W ISW2Q08773 1120 aa6.51□□□□□ -1.37
SLD3YGL113W MRPL32P25348 183 aa6.48□□□□□ -1.37
SLD3YGL113W RPG1P38249 964 aaKnown RBP6.45□□□□□ -1.38
SLD3YGL113W SIS1P25294 352 aaKnown RBP6.42□□□□□ -1.38
SLD3YGL113W DRS1P32892 752 aaKnown RBP6.13□□□□□ -1.43
SLD3YGL113W UBP9P39967 754 aa6.08□□□□□ -1.44
SLD3YGL113W UBP10P53874 792 aaPredicted RBP5.86□□□□□ -1.47
SLD3YGL113W MAP2P38174 421 aaKnown RBP5.78□□□□□ -1.48
SLD3YGL113W CDC27P38042 758 aa5.72□□□□□ -1.49
SLD3YGL113W TIF4632P39936 914 aaKnown RBP5.69□□□□□ -1.5
SLD3YGL113W TGL3P40308 642 aa5.65□□□□□ -1.51
SLD3YGL113W REB1P21538 810 aa5.57□□□□□ -1.52
SLD3YGL113W RSE1Q04693 1361 aaKnown RBP5.47□□□□□ -1.53
SLD3YGL113W SLX5P32828 619 aaKnown RBP5.45□□□□□ -1.54
SLD3YGL113W YJL171CP46992 396 aa5.43□□□□□ -1.54
SLD3YGL113W RPL17AP05740 184 aaKnown RBP5.39□□□□□ -1.55
SLD3YGL113W RPL17BP46990 184 aaKnown RBP5.39□□□□□ -1.55
SLD3YGL113W SCY1P53009 804 aa5.38□□□□□ -1.55
SLD3YGL113W DIP2Q12220 943 aaPredicted RBP5.38□□□□□ -1.55
SLD3YGL113W YBL029C-AQ3E756 94 aa5.37□□□□□ -1.55
SLD3YGL113W YKR023WP36119 530 aaKnown RBP5.29□□□□□ -1.56
SLD3YGL113W RGA2Q06407 1009 aa5.28□□□□□ -1.56
SLD3YGL113W AIR2Q12476 344 aaKnown RBP5.27□□□□□ -1.57
SLD3YGL113W SPP1Q03012 353 aa5.24□□□□□ -1.57
SLD3YGL113W VNX1P42839 908 aa5.23□□□□□ -1.57
SLD3YGL113W DCD1P06773 312 aa5.22□□□□□ -1.57
SLD3YGL113W HOP09932 586 aa5.22□□□□□ -1.57
SLD3YGL113W AVT3P36062 692 aa5.21□□□□□ -1.57
SLD3YGL113W TFC8Q12308 588 aa5.2□□□□□ -1.58
SLD3YGL113W FKH1P40466 484 aa5.18□□□□□ -1.58
SLD3YGL113W BMT6Q12291 365 aa5.16□□□□□ -1.58
SLD3YGL113W MST1P07236 462 aa5.15□□□□□ -1.58
SLD3YGL113W YOR238WQ08634 303 aa5.12□□□□□ -1.59
SLD3YGL113W BFR2Q06631 534 aaKnown RBP5.09□□□□□ -1.6
SLD3YGL113W WSC3Q12215 556 aa5.06□□□□□ -1.6
SLD3YGL113W TIF11P38912 153 aaKnown RBP5.04□□□□□ -1.6
SLD3YGL113W BCH2P36122 765 aa4.96□□□□□ -1.62
SLD3YGL113W LDB19Q12502 818 aa4.96□□□□□ -1.62
SLD3YGL113W SPT21P35209 758 aa4.94□□□□□ -1.62
SLD3YGL113W RGA1P39083 1007 aa4.93□□□□□ -1.62
SLD3YGL113W ULI1P43604 169 aa4.87□□□□□ -1.63
SLD3YGL113W BCK2P33306 851 aa4.86□□□□□ -1.63
SLD3YGL113W NSR1P27476 414 aaKnown RBP RIP-Chip data4.85□□□□□ -1.63not detected
SLD3YGL113W GTT3P39996 337 aa4.84□□□□□ -1.63
SLD3YGL113W YAP5P40574 245 aa4.84□□□□□ -1.64
SLD3YGL113W IOC2Q12072 812 aa4.82□□□□□ -1.64
SLD3YGL113W BDF1P35817 686 aa4.75□□□□□ -1.65
SLD3YGL113W NCR1Q12200 1170 aa4.75□□□□□ -1.65
SLD3YGL113W EPS1P40557 701 aa4.74□□□□□ -1.65
SLD3YGL113W RTG1P32607 177 aa4.72□□□□□ -1.65
SLD3YGL113W EAP1P36041 632 aaKnown RBP4.67□□□□□ -1.66
SLD3YGL113W RIM101P33400 625 aa4.67□□□□□ -1.66
SLD3YGL113W CHL1P22516 861 aaPredicted RBP4.64□□□□□ -1.67
SLD3YGL113W TFG1P41895 735 aaPredicted RBP4.63□□□□□ -1.67
SLD3YGL113W DPS1P04802 557 aaKnown RBP4.63□□□□□ -1.67
SLD3YGL113W XDJ1P39102 459 aa4.62□□□□□ -1.67
SLD3YGL113W SEC61P32915 480 aa4.62□□□□□ -1.67
SLD3YGL113W MSB4Q12317 492 aa4.6□□□□□ -1.67
SLD3YGL113W YNL035CP53962 389 aaKnown RBP4.59□□□□□ -1.67
SLD3YGL113W SAP30P38429 201 aa4.56□□□□□ -1.68
SLD3YGL113W TRP5P00931 707 aaKnown RBP4.55□□□□□ -1.68
SLD3YGL113W PRE3P38624 215 aa4.55□□□□□ -1.68
SLD3YGL113W OXP1P28273 1286 aa4.53□□□□□ -1.68
SLD3YGL113W VRP1P37370 817 aa4.52□□□□□ -1.69
SLD3YGL113W TFA1P36100 482 aa4.5□□□□□ -1.69
SLD3YGL113W SET4P42948 560 aa4.46□□□□□ -1.7
SLD3YGL113W PIB1Q06651 286 aa4.45□□□□□ -1.7
SLD3YGL113W SRC1Q03707 834 aa4.45□□□□□ -1.7
SLD3YGL113W YDL129WQ07555 291 aa4.44□□□□□ -1.7
SLD3YGL113W BBC1P47068 1157 aa4.43□□□□□ -1.7
SLD3YGL113W YOL036WQ08206 761 aa4.43□□□□□ -1.7
SLD3YGL113W PTP3P40048 928 aa4.41□□□□□ -1.7
SLD3YGL113W YIL055CP40523 627 aaKnown RBP4.39□□□□□ -1.71
SLD3YGL113W YAH1Q12184 172 aaKnown RBP4.37□□□□□ -1.71
SLD3YGL113W RSM7P47150 247 aa4.36□□□□□ -1.71
SLD3YGL113W JIP4Q03361 876 aa4.33□□□□□ -1.72
SLD3YGL113W AI2P03876 854 aa4.33□□□□□ -1.72
SLD3YGL113W YPL062WQ02781 134 aa4.33□□□□□ -1.72
SLD3YGL113W YLR271WQ06152 274 aa4.32□□□□□ -1.72
SLD3YGL113W DAN4P47179 1161 aa4.31□□□□□ -1.72
SLD3YGL113W ELP4Q02884 456 aaKnown RBP4.28□□□□□ -1.72
SLD3YGL113W PSD2P53037 1138 aaKnown RBP4.25□□□□□ -1.73
SLD3YGL113W SSP1P38871 571 aa4.23□□□□□ -1.73
SLD3YGL113W MRM1P25270 412 aa4.17□□□□□ -1.74
SLD3YGL113W CST9Q06032 482 aa4.17□□□□□ -1.74
SLD3YGL113W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
SLD3YGL113W ABP1P15891 592 aaKnown RBP4.16□□□□□ -1.74
SLD3YGL113W PTC4P38089 393 aa4.16□□□□□ -1.74
SLD3YGL113W TRK1P12685 1235 aa4.15□□□□□ -1.75
SLD3YGL113W SAM3Q08986 587 aa4.15□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms