RNA–Protein interactions for RNA: YDR452W

PPN1, Transcript of Vacuolar endopolyphosphatase with a role in phosphate metabolism, yeastyeast

Gene PPN1, Length 2,025 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PPN1YDR452W TY1A-DR1Q03856 440 aa6.4□□□□□ -1.39
PPN1YDR452W TY1A-ML1Q04706 440 aaKnown RBP6.4□□□□□ -1.39
PPN1YDR452W TY1A-BRQ12217 440 aa6.4□□□□□ -1.39
PPN1YDR452W TY1A-NL2Q12470 440 aa6.4□□□□□ -1.39
PPN1YDR452W TY1A-GR2Q12485 440 aa6.4□□□□□ -1.39
PPN1YDR452W PRT1P06103 763 aaKnown RBP6.37□□□□□ -1.39
PPN1YDR452W SEC2P17065 759 aa6.37□□□□□ -1.39
PPN1YDR452W RAS1P01119 309 aa6.36□□□□□ -1.39
PPN1YDR452W SAS4Q04003 481 aa6.36□□□□□ -1.39
PPN1YDR452W ERF2Q06551 359 aa6.35□□□□□ -1.39
PPN1YDR452W NPL4P33755 580 aa6.34□□□□□ -1.39
PPN1YDR452W KEX2P13134 814 aa6.33□□□□□ -1.4
PPN1YDR452W GCD11P32481 527 aaKnown RBP6.33□□□□□ -1.4
PPN1YDR452W SRC1Q03707 834 aa6.33□□□□□ -1.4
PPN1YDR452W AMS1P22855 1083 aa6.31□□□□□ -1.4
PPN1YDR452W CLB5P30283 435 aa6.31□□□□□ -1.4
PPN1YDR452W TEA1P47988 759 aa6.29□□□□□ -1.4
PPN1YDR452W NIS1P53939 407 aa6.28□□□□□ -1.4
PPN1YDR452W RRN7P40992 514 aa6.27□□□□□ -1.41
PPN1YDR452W SIT4P20604 311 aa6.26□□□□□ -1.41
PPN1YDR452W GLC3P32775 704 aa6.26□□□□□ -1.41
PPN1YDR452W CST6P40535 587 aa6.26□□□□□ -1.41
PPN1YDR452W AGE1Q04412 482 aa6.26□□□□□ -1.41
PPN1YDR452W MRF1P30775 413 aaPredicted RBP6.25□□□□□ -1.41
PPN1YDR452W YNR021WP53723 404 aaKnown RBP6.25□□□□□ -1.41
PPN1YDR452W SPT16P32558 1035 aaKnown RBP6.24□□□□□ -1.41
PPN1YDR452W YEL077CQ3E7X8 1277 aa6.24□□□□□ -1.41
PPN1YDR452W PAC1P39946 494 aaKnown RBP6.23□□□□□ -1.41
PPN1YDR452W RTF1P53064 558 aa6.23□□□□□ -1.41
PPN1YDR452W FPK1P53739 893 aa6.23□□□□□ -1.41
PPN1YDR452W TUB4P53378 473 aa6.22□□□□□ -1.41
PPN1YDR452W YNL115CP53925 644 aa6.22□□□□□ -1.41
PPN1YDR452W ERG12P07277 443 aa6.21□□□□□ -1.41
PPN1YDR452W LAM6Q08001 693 aa6.21□□□□□ -1.42
PPN1YDR452W CLA4P48562 842 aa6.2□□□□□ -1.42
PPN1YDR452W ATF2P53296 535 aa6.2□□□□□ -1.42
PPN1YDR452W SCJ1P25303 377 aa6.19□□□□□ -1.42
PPN1YDR452W BDP1P46678 594 aa6.18□□□□□ -1.42
PPN1YDR452W FRK1Q03002 865 aaPredicted RBP6.18□□□□□ -1.42
PPN1YDR452W MOD5P07884 428 aa6.17□□□□□ -1.42
PPN1YDR452W PAT1P25644 796 aaKnown RBP6.17□□□□□ -1.42
PPN1YDR452W YMR196WQ04336 1088 aa6.17□□□□□ -1.42
PPN1YDR452W LEU3P08638 886 aa6.16□□□□□ -1.42
PPN1YDR452W AIR1P40507 360 aaKnown RBP6.16□□□□□ -1.42
PPN1YDR452W HST2P53686 357 aa6.16□□□□□ -1.42
PPN1YDR452W SLY41P22215 453 aa6.15□□□□□ -1.42
PPN1YDR452W AIM7Q12156 149 aa6.15□□□□□ -1.42
PPN1YDR452W TRK1P12685 1235 aa6.14□□□□□ -1.43
PPN1YDR452W TYW1Q08960 810 aaKnown RBP6.13□□□□□ -1.43
PPN1YDR452W KTR1P27810 393 aaKnown RBP6.13□□□□□ -1.43
PPN1YDR452W ESS1P22696 170 aa6.11□□□□□ -1.43
PPN1YDR452W MMP1Q12372 583 aa6.11□□□□□ -1.43
PPN1YDR452W PDC1P06169 563 aaKnown RBP6.1□□□□□ -1.43
PPN1YDR452W TRM1P15565 570 aaKnown RBP6.1□□□□□ -1.43
PPN1YDR452W PUS5Q06244 254 aa6.1□□□□□ -1.43
PPN1YDR452W YJU3P28321 313 aa6.09□□□□□ -1.43
PPN1YDR452W GLN1P32288 370 aaKnown RBP6.09□□□□□ -1.43
PPN1YDR452W YDL206WQ12424 762 aa6.08□□□□□ -1.44
PPN1YDR452W PUS6P53294 404 aa6.08□□□□□ -1.44
PPN1YDR452W TPD3P31383 635 aa6.06□□□□□ -1.44
PPN1YDR452W RRD1P40454 393 aaKnown RBP6.06□□□□□ -1.44
PPN1YDR452W HXT10P43581 546 aa6.06□□□□□ -1.44
PPN1YDR452W KXD1P53158 218 aa6.06□□□□□ -1.44
PPN1YDR452W KIN1P13185 1064 aa6.06□□□□□ -1.44
PPN1YDR452W HED1Q03937 162 aa6.06□□□□□ -1.44
PPN1YDR452W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
PPN1YDR452W RPA14P50106 137 aa6.05□□□□□ -1.44
PPN1YDR452W CDC4P07834 779 aa6.04□□□□□ -1.44
PPN1YDR452W RSC30P38781 883 aa6.04□□□□□ -1.44
PPN1YDR452W TBF1Q02457 562 aa6.04□□□□□ -1.44
PPN1YDR452W CSN12P47130 423 aa6.04□□□□□ -1.44
PPN1YDR452W YPR097WQ06839 1073 aa6.04□□□□□ -1.44
PPN1YDR452W MET32Q12041 191 aa6.04□□□□□ -1.44
PPN1YDR452W PKH3Q03306 898 aaPredicted RBP6.03□□□□□ -1.44
PPN1YDR452W ALR1Q08269 859 aa6.03□□□□□ -1.44
PPN1YDR452W RPN1P38764 993 aaKnown RBP6.01□□□□□ -1.45
PPN1YDR452W BRE2P43132 505 aa5.99□□□□□ -1.45
PPN1YDR452W RAD59Q12223 238 aa5.98□□□□□ -1.45
PPN1YDR452W ARG8P18544 423 aa5.98□□□□□ -1.45
PPN1YDR452W GUA1P38625 525 aaKnown RBP5.98□□□□□ -1.45
PPN1YDR452W ASH1P34233 588 aa5.96□□□□□ -1.45
PPN1YDR452W SYH1Q02875 849 aaKnown RBP5.96□□□□□ -1.46
PPN1YDR452W AFT1P22149 690 aa5.95□□□□□ -1.46
PPN1YDR452W VAC17P25591 423 aa5.94□□□□□ -1.46
PPN1YDR452W KIP2P28743 706 aa5.93□□□□□ -1.46
PPN1YDR452W ITT1Q04638 464 aa5.93□□□□□ -1.46
PPN1YDR452W SSA2P10592 639 aaKnown RBP5.92□□□□□ -1.46
PPN1YDR452W IXR1P33417 597 aa5.92□□□□□ -1.46
PPN1YDR452W HST3P53687 447 aa5.91□□□□□ -1.46
PPN1YDR452W GCR2Q01722 534 aa5.91□□□□□ -1.46
PPN1YDR452W MRT4P33201 236 aaKnown RBP5.9□□□□□ -1.47
PPN1YDR452W FIG4P42837 879 aa5.9□□□□□ -1.47
PPN1YDR452W YJR115WP47152 169 aa5.89□□□□□ -1.47
PPN1YDR452W MAK16P10962 306 aaPredicted RBP5.87□□□□□ -1.47
PPN1YDR452W MSB3P48566 633 aaPredicted RBP5.87□□□□□ -1.47
PPN1YDR452W HPC2Q01448 625 aa5.87□□□□□ -1.47
PPN1YDR452W YPR084WQ06821 456 aa5.87□□□□□ -1.47
PPN1YDR452W MET22P32179 357 aa5.86□□□□□ -1.47
PPN1YDR452W APP1P53933 587 aa5.86□□□□□ -1.47
PPN1YDR452W TFB3Q03290 321 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms