RNA–Protein interactions for RNA: YDR268W

MSW1, Transcript of Mitochondrial tryptophanyl-tRNA synthetase, yeastyeast

Gene MSW1, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSW1YDR268W TY1A-HP0C2I4 478 aaKnown RBP7.11□□□□□ -1.27
MSW1YDR268W TY1A-AP0CX57 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-PR1P0CX58 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-ORP0CX59 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-PR2P0CX60 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-DR5P0CX65 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-ER2P0CX66 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-GR3P0CX67 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-LR1P0CX68 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-MR2P0CX69 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-JR2P47099 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-DR1Q03856 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-ML1Q04706 440 aaKnown RBP7.11□□□□□ -1.27
MSW1YDR268W TY1A-BRQ12217 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-NL2Q12470 440 aa7.11□□□□□ -1.27
MSW1YDR268W TY1A-GR2Q12485 440 aa7.11□□□□□ -1.27
MSW1YDR268W ERG12P07277 443 aa7.1□□□□□ -1.27
MSW1YDR268W PBS2P08018 668 aa7.1□□□□□ -1.27
MSW1YDR268W YPR109WQ06104 294 aa7.1□□□□□ -1.27
MSW1YDR268W GCD11P32481 527 aaKnown RBP7.09□□□□□ -1.27
MSW1YDR268W ECM5Q03214 1411 aa7.09□□□□□ -1.28
MSW1YDR268W SEC2P17065 759 aa7.08□□□□□ -1.28
MSW1YDR268W PSE1P32337 1089 aaKnown RBP7.06□□□□□ -1.28
MSW1YDR268W SPT16P32558 1035 aaKnown RBP7.06□□□□□ -1.28
MSW1YDR268W SAS10Q12136 610 aaPredicted RBP7.06□□□□□ -1.28
MSW1YDR268W BUD4P47136 1447 aa7.06□□□□□ -1.28
MSW1YDR268W THO2P53552 1597 aaKnown RBP7.04□□□□□ -1.28
MSW1YDR268W CST6P40535 587 aa7.04□□□□□ -1.28
MSW1YDR268W MAM3Q12296 706 aa7.03□□□□□ -1.28
MSW1YDR268W RRN7P40992 514 aa7.02□□□□□ -1.29
MSW1YDR268W LAM6Q08001 693 aa7.02□□□□□ -1.29
MSW1YDR268W PAT1P25644 796 aaKnown RBP7.01□□□□□ -1.29
MSW1YDR268W CLB5P30283 435 aa7.01□□□□□ -1.29
MSW1YDR268W DSF2P38213 736 aa7.01□□□□□ -1.29
MSW1YDR268W MDS3P53094 1487 aa7□□□□□ -1.29
MSW1YDR268W XRN1P22147 1528 aaKnown RBP7□□□□□ -1.29
MSW1YDR268W KEX2P13134 814 aa6.99□□□□□ -1.29
MSW1YDR268W ERF2Q06551 359 aa6.98□□□□□ -1.29
MSW1YDR268W IES2P40154 320 aa6.97□□□□□ -1.29
MSW1YDR268W AIR1P40507 360 aaKnown RBP6.97□□□□□ -1.29
MSW1YDR268W CLA4P48562 842 aa6.97□□□□□ -1.29
MSW1YDR268W BDP1P46678 594 aa6.96□□□□□ -1.3
MSW1YDR268W FRK1Q03002 865 aaPredicted RBP6.96□□□□□ -1.3
MSW1YDR268W RGA1P39083 1007 aa6.95□□□□□ -1.3
MSW1YDR268W BRE2P43132 505 aa6.94□□□□□ -1.3
MSW1YDR268W RTF1P53064 558 aa6.94□□□□□ -1.3
MSW1YDR268W LEO1P38439 464 aa6.93□□□□□ -1.3
MSW1YDR268W NUP42P49686 430 aaKnown RBP6.93□□□□□ -1.3
MSW1YDR268W RGA2Q06407 1009 aa6.93□□□□□ -1.3
MSW1YDR268W CDC4P07834 779 aa6.92□□□□□ -1.3
MSW1YDR268W PAC1P39946 494 aaKnown RBP6.91□□□□□ -1.3
MSW1YDR268W AGE1Q04412 482 aa6.91□□□□□ -1.3
MSW1YDR268W MOD5P07884 428 aa6.89□□□□□ -1.31
MSW1YDR268W LEU3P08638 886 aa6.89□□□□□ -1.31
MSW1YDR268W TEA1P47988 759 aa6.89□□□□□ -1.31
MSW1YDR268W TUB4P53378 473 aa6.89□□□□□ -1.31
MSW1YDR268W YNL115CP53925 644 aa6.89□□□□□ -1.31
MSW1YDR268W GCR2Q01722 534 aa6.89□□□□□ -1.31
MSW1YDR268W HED1Q03937 162 aa6.89□□□□□ -1.31
MSW1YDR268W PEP1P32319 1579 aa6.88□□□□□ -1.31
MSW1YDR268W SIT4P20604 311 aa6.88□□□□□ -1.31
MSW1YDR268W SPB4P25808 606 aaPredicted RBP6.88□□□□□ -1.31
MSW1YDR268W REV3P14284 1504 aa6.87□□□□□ -1.31
MSW1YDR268W ATG2P53855 1592 aa6.86□□□□□ -1.31
MSW1YDR268W SSN2P38931 1420 aa6.86□□□□□ -1.31
MSW1YDR268W DIT2P21595 489 aa6.85□□□□□ -1.31
MSW1YDR268W NIS1P53939 407 aa6.85□□□□□ -1.31
MSW1YDR268W TAF2P23255 1407 aa6.82□□□□□ -1.32
MSW1YDR268W SKI3P17883 1432 aaKnown RBP6.81□□□□□ -1.32
MSW1YDR268W BPT1P14772 1559 aa6.81□□□□□ -1.32
MSW1YDR268W YPL062WQ02781 134 aa6.8□□□□□ -1.32
MSW1YDR268W TPD3P31383 635 aa6.79□□□□□ -1.32
MSW1YDR268W FPK1P53739 893 aa6.79□□□□□ -1.32
MSW1YDR268W PUS5Q06244 254 aa6.79□□□□□ -1.32
MSW1YDR268W MET32Q12041 191 aa6.79□□□□□ -1.32
MSW1YDR268W KXD1P53158 218 aa6.78□□□□□ -1.32
MSW1YDR268W YMR196WQ04336 1088 aa6.78□□□□□ -1.32
MSW1YDR268W AFT1P22149 690 aa6.77□□□□□ -1.33
MSW1YDR268W SIN3P22579 1536 aa6.76□□□□□ -1.33
MSW1YDR268W SLY41P22215 453 aa6.76□□□□□ -1.33
MSW1YDR268W GAR1P28007 205 aaKnown RBP6.76□□□□□ -1.33
MSW1YDR268W ASH1P34233 588 aa6.76□□□□□ -1.33
MSW1YDR268W RRD1P40454 393 aaKnown RBP6.76□□□□□ -1.33
MSW1YDR268W HXT10P43581 546 aa6.76□□□□□ -1.33
MSW1YDR268W PDC1P06169 563 aaKnown RBP6.75□□□□□ -1.33
MSW1YDR268W MET22P32179 357 aa6.74□□□□□ -1.33
MSW1YDR268W HST3P53687 447 aa6.74□□□□□ -1.33
MSW1YDR268W TAF7Q05021 590 aa6.74□□□□□ -1.33
MSW1YDR268W ENV9Q08651 330 aa6.74□□□□□ -1.33
MSW1YDR268W GBP2P25555 427 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
MSW1YDR268W SSK2P53599 1579 aa6.73□□□□□ -1.33
MSW1YDR268W HST2P53686 357 aa6.72□□□□□ -1.33
MSW1YDR268W RPA14P50106 137 aa6.71□□□□□ -1.34
MSW1YDR268W PUS6P53294 404 aa6.71□□□□□ -1.34
MSW1YDR268W SYH1Q02875 849 aaKnown RBP6.71□□□□□ -1.34
MSW1YDR268W RPN1P38764 993 aaKnown RBP6.7□□□□□ -1.34
MSW1YDR268W TBF1Q02457 562 aa6.7□□□□□ -1.34
MSW1YDR268W ALR1Q08269 859 aa6.7□□□□□ -1.34
MSW1YDR268W YDL206WQ12424 762 aa6.7□□□□□ -1.34
MSW1YDR268W YCF1P39109 1515 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms