RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A PCS60P38137 543 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
TFB5YDR079C-A TY1A-JR2P47099 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-DR1Q03856 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-ML1Q04706 440 aaKnown RBP4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-BRQ12217 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-NL2Q12470 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-GR2Q12485 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A UBP14P38237 781 aaKnown RBP4.76□□□□□ -1.65
TFB5YDR079C-A MET32Q12041 191 aa4.76□□□□□ -1.65
TFB5YDR079C-A CAF120P53836 1060 aa4.75□□□□□ -1.65
TFB5YDR079C-A SEC2P17065 759 aa4.74□□□□□ -1.65
TFB5YDR079C-A RAD54P32863 898 aa4.73□□□□□ -1.65
TFB5YDR079C-A ACO2P39533 789 aa4.73□□□□□ -1.65
TFB5YDR079C-A PEX21P50091 288 aa4.72□□□□□ -1.65
TFB5YDR079C-A HST3P53687 447 aa4.72□□□□□ -1.65
TFB5YDR079C-A GCD11P32481 527 aaKnown RBP4.71□□□□□ -1.66
TFB5YDR079C-A NPL4P33755 580 aa4.71□□□□□ -1.66
TFB5YDR079C-A VHR2P40041 505 aa4.71□□□□□ -1.66
TFB5YDR079C-A YGR035CP53222 116 aa4.71□□□□□ -1.66
TFB5YDR079C-A GAP1P19145 602 aaPredicted RBP4.69□□□□□ -1.66
TFB5YDR079C-A RRN7P40992 514 aa4.69□□□□□ -1.66
TFB5YDR079C-A YJR115WP47152 169 aa4.69□□□□□ -1.66
TFB5YDR079C-A TFB4Q12004 338 aa4.69□□□□□ -1.66
TFB5YDR079C-A LSB3P43603 459 aaKnown RBP4.68□□□□□ -1.66
TFB5YDR079C-A NRD1P53617 575 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66 RIP-Chip
TFB5YDR079C-A TUM1Q08686 304 aaKnown RBP4.67□□□□□ -1.66
TFB5YDR079C-A PAT1P25644 796 aaKnown RBP4.65□□□□□ -1.67
TFB5YDR079C-A HPF1Q05164 967 aa4.65□□□□□ -1.67
TFB5YDR079C-A CSC1Q06538 782 aa4.65□□□□□ -1.67
TFB5YDR079C-A ICP55P40051 511 aa4.64□□□□□ -1.67
TFB5YDR079C-A PUS1Q12211 544 aaKnown RBP4.64□□□□□ -1.67
TFB5YDR079C-A MOD5P07884 428 aa4.59□□□□□ -1.67
TFB5YDR079C-A YIR007WP40566 764 aa4.59□□□□□ -1.67
TFB5YDR079C-A OPT2Q06593 877 aa4.59□□□□□ -1.67
TFB5YDR079C-A YPR204WQ08995 1032 aa4.59□□□□□ -1.67
TFB5YDR079C-A MSB3P48566 633 aaPredicted RBP4.57□□□□□ -1.68
TFB5YDR079C-A YDR090CQ03193 310 aa4.57□□□□□ -1.68
TFB5YDR079C-A PUS5Q06244 254 aa4.56□□□□□ -1.68
TFB5YDR079C-A GLY1P37303 387 aaKnown RBP4.54□□□□□ -1.68
TFB5YDR079C-A YLR346CQ06139 101 aa4.54□□□□□ -1.68
TFB5YDR079C-A PHM7Q12252 991 aa4.54□□□□□ -1.68
TFB5YDR079C-A KIC1P38692 1080 aa4.53□□□□□ -1.68
TFB5YDR079C-A PAC1P39946 494 aaKnown RBP4.51□□□□□ -1.69
TFB5YDR079C-A ORC6P38826 435 aa4.5□□□□□ -1.69
TFB5YDR079C-A PTK2P47116 818 aaKnown RBP4.5□□□□□ -1.69
TFB5YDR079C-A SCW11P53189 542 aa4.49□□□□□ -1.69
TFB5YDR079C-A TY1A-BLQ12266 440 aa4.49□□□□□ -1.69
TFB5YDR079C-A ERF2Q06551 359 aa4.47□□□□□ -1.69
TFB5YDR079C-A SRF1Q12516 437 aa4.46□□□□□ -1.7
TFB5YDR079C-A KEX2P13134 814 aa4.45□□□□□ -1.7
TFB5YDR079C-A UGA3P26370 528 aa4.45□□□□□ -1.7
TFB5YDR079C-A MDJ1P35191 511 aa4.45□□□□□ -1.7
TFB5YDR079C-A DPH6Q12429 685 aa4.45□□□□□ -1.7
TFB5YDR079C-A MIP1P15801 1254 aa4.44□□□□□ -1.7
TFB5YDR079C-A MVP1P40959 511 aaKnown RBP4.44□□□□□ -1.7
TFB5YDR079C-A NUP85P46673 744 aa4.44□□□□□ -1.7
TFB5YDR079C-A IFH1P39520 1085 aa4.43□□□□□ -1.7
TFB5YDR079C-A CCT8P47079 568 aaKnown RBP4.43□□□□□ -1.7
TFB5YDR079C-A AGE1Q04412 482 aa4.43□□□□□ -1.7
TFB5YDR079C-A TYW1Q08960 810 aaKnown RBP4.43□□□□□ -1.7
TFB5YDR079C-A SET1P38827 1080 aaKnown RBP4.42□□□□□ -1.7
TFB5YDR079C-A YPR109WQ06104 294 aa4.41□□□□□ -1.7
TFB5YDR079C-A TUB4P53378 473 aa4.39□□□□□ -1.71
TFB5YDR079C-A SYH1Q02875 849 aaKnown RBP4.39□□□□□ -1.71
TFB5YDR079C-A NSG2P53898 299 aa4.38□□□□□ -1.71
TFB5YDR079C-A TPD3P31383 635 aa4.37□□□□□ -1.71
TFB5YDR079C-A RGR1P19263 1082 aa4.35□□□□□ -1.71
TFB5YDR079C-A ROG3P43602 733 aa4.35□□□□□ -1.71
TFB5YDR079C-A JJJ3P47138 172 aa4.35□□□□□ -1.71
TFB5YDR079C-A LYS5P50113 272 aa4.34□□□□□ -1.71
TFB5YDR079C-A TY1A-MR1Q04215 440 aa4.33□□□□□ -1.72
TFB5YDR079C-A CCP1P00431 361 aa4.32□□□□□ -1.72
TFB5YDR079C-A SBP1P10080 294 aaKnown RBP4.32□□□□□ -1.72
TFB5YDR079C-A YFL066CP43538 392 aa4.32□□□□□ -1.72
TFB5YDR079C-A UBP2Q01476 1272 aa4.32□□□□□ -1.72
TFB5YDR079C-A RTT106P40161 455 aa4.31□□□□□ -1.72
TFB5YDR079C-A MRT4P33201 236 aaKnown RBP4.3□□□□□ -1.72
TFB5YDR079C-A KXD1P53158 218 aa4.3□□□□□ -1.72
TFB5YDR079C-A LSC2P53312 427 aa4.3□□□□□ -1.72
TFB5YDR079C-A HXT10P43581 546 aa4.29□□□□□ -1.72
TFB5YDR079C-A REF2P42073 533 aaPredicted RBP4.28□□□□□ -1.72
TFB5YDR079C-A THI72Q08579 599 aa4.28□□□□□ -1.72
TFB5YDR079C-A AI1P03875 834 aa4.26□□□□□ -1.73
TFB5YDR079C-A YJR098CP47139 656 aa4.26□□□□□ -1.73
TFB5YDR079C-A RTF1P53064 558 aa4.26□□□□□ -1.73
TFB5YDR079C-A YPR053CQ6Q5F3 151 aa4.26□□□□□ -1.73
TFB5YDR079C-A OSH7P38755 437 aa4.25□□□□□ -1.73
TFB5YDR079C-A AAD14P42884 376 aa4.25□□□□□ -1.73
TFB5YDR079C-A PDC1P06169 563 aaKnown RBP4.24□□□□□ -1.73
TFB5YDR079C-A ARG82P07250 355 aa4.24□□□□□ -1.73
TFB5YDR079C-A TCB1Q12466 1186 aa4.24□□□□□ -1.73
TFB5YDR079C-A KIP2P28743 706 aa4.22□□□□□ -1.73
TFB5YDR079C-A SKN7P38889 622 aa4.22□□□□□ -1.73
TFB5YDR079C-A COX6P00427 148 aa4.21□□□□□ -1.74
TFB5YDR079C-A YNL115CP53925 644 aa4.21□□□□□ -1.74
TFB5YDR079C-A MAK21Q12176 1025 aaKnown RBP4.21□□□□□ -1.74
TFB5YDR079C-A DLD1P32891 587 aa4.2□□□□□ -1.74
TFB5YDR079C-A IXR1P33417 597 aa4.2□□□□□ -1.74
TFB5YDR079C-A CLB5P30283 435 aa4.15□□□□□ -1.75
TFB5YDR079C-A YBL086CP38177 466 aa4.14□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms