RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A FAP1P53971 965 aa10.84□□□□□ -0.67
TFB5YDR079C-A MTC1P47018 478 aaKnown RBP10.27□□□□□ -0.77
TFB5YDR079C-A PRY3P47033 881 aa10.27□□□□□ -0.77
TFB5YDR079C-A YCK3P39962 524 aa9.71□□□□□ -0.86
TFB5YDR079C-A AAD16Q02895 342 aa9.6□□□□□ -0.87
TFB5YDR079C-A HAA1Q12753 694 aaKnown RBP9.57□□□□□ -0.88
TFB5YDR079C-A PRI1P10363 409 aa9.48□□□□□ -0.89
TFB5YDR079C-A TSR3Q12094 313 aaKnown RBP8.86□□□□□ -0.99
TFB5YDR079C-A ISW2Q08773 1120 aa8.82□□□□□ -1
TFB5YDR079C-A RPG1P38249 964 aaKnown RBP8.75□□□□□ -1.01
TFB5YDR079C-A YGL015CP33199 130 aa8.58□□□□□ -1.04
TFB5YDR079C-A BUD31P25337 157 aaPredicted RBP8.55□□□□□ -1.04
TFB5YDR079C-A MRPL32P25348 183 aa8.51□□□□□ -1.05
TFB5YDR079C-A DRS1P32892 752 aaKnown RBP8.09□□□□□ -1.11
TFB5YDR079C-A SIS1P25294 352 aaKnown RBP7.96□□□□□ -1.14
TFB5YDR079C-A CDC27P38042 758 aa7.85□□□□□ -1.15
TFB5YDR079C-A UBP10P53874 792 aaPredicted RBP7.84□□□□□ -1.15
TFB5YDR079C-A RSE1Q04693 1361 aaKnown RBP7.79□□□□□ -1.16
TFB5YDR079C-A MAP2P38174 421 aaKnown RBP7.77□□□□□ -1.17
TFB5YDR079C-A REB1P21538 810 aa7.72□□□□□ -1.17
TFB5YDR079C-A UBP9P39967 754 aa7.71□□□□□ -1.18
TFB5YDR079C-A RPL17AP05740 184 aaKnown RBP7.63□□□□□ -1.19
TFB5YDR079C-A RPL17BP46990 184 aaKnown RBP7.63□□□□□ -1.19
TFB5YDR079C-A DIP2Q12220 943 aaPredicted RBP7.62□□□□□ -1.19
TFB5YDR079C-A TGL3P40308 642 aa7.51□□□□□ -1.21
TFB5YDR079C-A TIF4632P39936 914 aaKnown RBP7.5□□□□□ -1.21
TFB5YDR079C-A YKR023WP36119 530 aaKnown RBP7.47□□□□□ -1.21
TFB5YDR079C-A SLX5P32828 619 aaKnown RBP7.35□□□□□ -1.23
TFB5YDR079C-A SCY1P53009 804 aa7.34□□□□□ -1.23
TFB5YDR079C-A TFC8Q12308 588 aa7.32□□□□□ -1.24
TFB5YDR079C-A DCD1P06773 312 aa7.31□□□□□ -1.24
TFB5YDR079C-A HOP09932 586 aa7.3□□□□□ -1.24
TFB5YDR079C-A SPT21P35209 758 aa7.25□□□□□ -1.25
TFB5YDR079C-A YBL029C-AQ3E756 94 aa7.13□□□□□ -1.27
TFB5YDR079C-A MST1P07236 462 aa7.05□□□□□ -1.28
TFB5YDR079C-A BCH2P36122 765 aa7.02□□□□□ -1.29
TFB5YDR079C-A VNX1P42839 908 aa7□□□□□ -1.29
TFB5YDR079C-A AVT3P36062 692 aa6.97□□□□□ -1.29
TFB5YDR079C-A AIR2Q12476 344 aaKnown RBP6.97□□□□□ -1.29
TFB5YDR079C-A YJL171CP46992 396 aa6.94□□□□□ -1.3
TFB5YDR079C-A FKH1P40466 484 aa6.92□□□□□ -1.3
TFB5YDR079C-A SPP1Q03012 353 aa6.91□□□□□ -1.3
TFB5YDR079C-A YOR238WQ08634 303 aa6.9□□□□□ -1.3
TFB5YDR079C-A NSR1P27476 414 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32 RIP-Chip
TFB5YDR079C-A WSC3Q12215 556 aa6.77□□□□□ -1.33
TFB5YDR079C-A TIF11P38912 153 aaKnown RBP6.76□□□□□ -1.33
TFB5YDR079C-A BDF1P35817 686 aa6.75□□□□□ -1.33
TFB5YDR079C-A EPS1P40557 701 aa6.74□□□□□ -1.33
TFB5YDR079C-A BMT6Q12291 365 aa6.74□□□□□ -1.33
TFB5YDR079C-A YAP5P40574 245 aa6.66□□□□□ -1.34
TFB5YDR079C-A LDB19Q12502 818 aa6.66□□□□□ -1.34
TFB5YDR079C-A RIM101P33400 625 aa6.65□□□□□ -1.34
TFB5YDR079C-A IOC2Q12072 812 aa6.59□□□□□ -1.35
TFB5YDR079C-A RGA2Q06407 1009 aa6.57□□□□□ -1.36
TFB5YDR079C-A ULI1P43604 169 aa6.56□□□□□ -1.36
TFB5YDR079C-A GTT3P39996 337 aa6.55□□□□□ -1.36
TFB5YDR079C-A RTG1P32607 177 aa6.4□□□□□ -1.38
TFB5YDR079C-A BCK2P33306 851 aa6.39□□□□□ -1.39
TFB5YDR079C-A NCR1Q12200 1170 aa6.38□□□□□ -1.39
TFB5YDR079C-A MSB4Q12317 492 aa6.37□□□□□ -1.39
TFB5YDR079C-A OXP1P28273 1286 aa6.36□□□□□ -1.39
TFB5YDR079C-A EAP1P36041 632 aaKnown RBP6.36□□□□□ -1.39
TFB5YDR079C-A BBC1P47068 1157 aa6.34□□□□□ -1.39
TFB5YDR079C-A SEC61P32915 480 aa6.3□□□□□ -1.4
TFB5YDR079C-A PTP3P40048 928 aa6.3□□□□□ -1.4
TFB5YDR079C-A TRP5P00931 707 aaKnown RBP6.29□□□□□ -1.4
TFB5YDR079C-A YNL035CP53962 389 aaKnown RBP6.28□□□□□ -1.4
TFB5YDR079C-A PIB1Q06651 286 aa6.27□□□□□ -1.41
TFB5YDR079C-A RGA1P39083 1007 aa6.25□□□□□ -1.41
TFB5YDR079C-A AI2P03876 854 aa6.24□□□□□ -1.41
TFB5YDR079C-A YIL055CP40523 627 aaKnown RBP6.24□□□□□ -1.41
TFB5YDR079C-A CHL1P22516 861 aaPredicted RBP6.23□□□□□ -1.41
TFB5YDR079C-A YOL036WQ08206 761 aa6.23□□□□□ -1.41
TFB5YDR079C-A SET4P42948 560 aa6.21□□□□□ -1.42
TFB5YDR079C-A SAP30P38429 201 aa6.19□□□□□ -1.42
TFB5YDR079C-A TFG1P41895 735 aaPredicted RBP6.18□□□□□ -1.42
TFB5YDR079C-A RSM7P47150 247 aa6.18□□□□□ -1.42
TFB5YDR079C-A PRE3P38624 215 aa6.16□□□□□ -1.42
TFB5YDR079C-A XDJ1P39102 459 aa6.15□□□□□ -1.42
TFB5YDR079C-A DPS1P04802 557 aaKnown RBP6.1□□□□□ -1.43
TFB5YDR079C-A YDL129WQ07555 291 aa6.1□□□□□ -1.43
TFB5YDR079C-A DAN4P47179 1161 aa6.09□□□□□ -1.43
TFB5YDR079C-A VRP1P37370 817 aa6.06□□□□□ -1.44
TFB5YDR079C-A JIP4Q03361 876 aa6.04□□□□□ -1.44
TFB5YDR079C-A SRC1Q03707 834 aa6.02□□□□□ -1.45
TFB5YDR079C-A BFR2Q06631 534 aaKnown RBP6.02□□□□□ -1.45
TFB5YDR079C-A SAM3Q08986 587 aa6.01□□□□□ -1.45
TFB5YDR079C-A VMA1P17255 1071 aaKnown RBP5.98□□□□□ -1.45
TFB5YDR079C-A MRM1P25270 412 aa5.94□□□□□ -1.46
TFB5YDR079C-A PSD2P53037 1138 aaKnown RBP5.93□□□□□ -1.46
TFB5YDR079C-A YAH1Q12184 172 aaKnown RBP5.93□□□□□ -1.46
TFB5YDR079C-A DBP1P24784 617 aaKnown RBP5.92□□□□□ -1.46
TFB5YDR079C-A YMR1P47147 688 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
TFB5YDR079C-A ABP1P15891 592 aaKnown RBP5.91□□□□□ -1.46
TFB5YDR079C-A YDR344CQ05510 147 aa5.91□□□□□ -1.46
TFB5YDR079C-A YFR006WP43590 535 aa5.88□□□□□ -1.47
TFB5YDR079C-A PTC4P38089 393 aa5.87□□□□□ -1.47
TFB5YDR079C-A HTA1P04911 132 aaKnown RBP5.85□□□□□ -1.47
TFB5YDR079C-A HTA2P04912 132 aa5.85□□□□□ -1.47
TFB5YDR079C-A STS1P38637 319 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms