RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C TY1B-PR2P0C2J0 1756 aa8.2□□□□□ -1.1
SCM3YDL139C TY1B-PR3P0C2J1 1755 aaKnown RBP8.2□□□□□ -1.1
SCM3YDL139C TY1B-JR1P47098 1755 aa8.2□□□□□ -1.1
SCM3YDL139C TY1B-ML2Q03434 1755 aaKnown RBP8.2□□□□□ -1.1
SCM3YDL139C TY1B-ER1Q03612 1755 aa8.2□□□□□ -1.1
SCM3YDL139C TY1B-ML1Q04711 1755 aaKnown RBP8.2□□□□□ -1.1
SCM3YDL139C TY1B-GR2Q12269 1755 aa8.2□□□□□ -1.1
SCM3YDL139C TY1B-OLQ12273 1755 aa8.2□□□□□ -1.1
SCM3YDL139C TY1B-PLQ12414 1755 aaKnown RBP8.2□□□□□ -1.1
SCM3YDL139C RPO31P04051 1460 aa8.19□□□□□ -1.1
SCM3YDL139C NMA111P53920 997 aa8.19□□□□□ -1.1
SCM3YDL139C DPL1Q05567 589 aa8.19□□□□□ -1.1
SCM3YDL139C BCK2P33306 851 aa8.18□□□□□ -1.1
SCM3YDL139C UFD4P33202 1483 aa8.18□□□□□ -1.1
SCM3YDL139C SPT23P35210 1082 aa8.17□□□□□ -1.1
SCM3YDL139C KIC1P38692 1080 aa8.17□□□□□ -1.1
SCM3YDL139C VRP1P37370 817 aa8.15□□□□□ -1.1
SCM3YDL139C YOR1P53049 1477 aa8.12□□□□□ -1.11
SCM3YDL139C LEU3P08638 886 aa8.11□□□□□ -1.11
SCM3YDL139C BNI4P53858 892 aa8.11□□□□□ -1.11
SCM3YDL139C LEO1P38439 464 aa8.1□□□□□ -1.11
SCM3YDL139C PTC2P39966 464 aaKnown RBP8.1□□□□□ -1.11
SCM3YDL139C ISU2Q12056 156 aa8.1□□□□□ -1.11
SCM3YDL139C ESC1Q03661 1658 aaKnown RBP8.08□□□□□ -1.12
SCM3YDL139C MMS22Q06164 1454 aa8.08□□□□□ -1.12
SCM3YDL139C COX6P00427 148 aa8.07□□□□□ -1.12
SCM3YDL139C CKB1P43639 278 aa8.07□□□□□ -1.12
SCM3YDL139C TOP2P06786 1428 aaKnown RBP8.06□□□□□ -1.12
SCM3YDL139C PBS2P08018 668 aa8.06□□□□□ -1.12
SCM3YDL139C RPP1BP10622 106 aaKnown RBP8.06□□□□□ -1.12
SCM3YDL139C TY1B-JR2P47100 1755 aaKnown RBP8.05□□□□□ -1.12
SCM3YDL139C TY1B-ER2Q03619 1755 aa8.05□□□□□ -1.12
SCM3YDL139C TY1B-MR1Q04214 1755 aa8.05□□□□□ -1.12
SCM3YDL139C TY1B-MR2Q04670 1755 aaKnown RBP8.05□□□□□ -1.12
SCM3YDL139C TY1B-LR1Q12088 1755 aaKnown RBP8.05□□□□□ -1.12
SCM3YDL139C TY1B-NL1Q12112 1755 aa8.05□□□□□ -1.12
SCM3YDL139C TY1B-GR1Q12141 1755 aa8.05□□□□□ -1.12
SCM3YDL139C TY1B-BLQ12490 1755 aa8.05□□□□□ -1.12
SCM3YDL139C PDR1P12383 1068 aa8.04□□□□□ -1.12
SCM3YDL139C YML082WQ04533 649 aaKnown RBP8.04□□□□□ -1.12
SCM3YDL139C MAK21Q12176 1025 aaKnown RBP8.04□□□□□ -1.12
SCM3YDL139C CDC25P04821 1589 aa8.03□□□□□ -1.12
SCM3YDL139C XDJ1P39102 459 aa8.02□□□□□ -1.13
SCM3YDL139C DNF1P32660 1571 aa8.01□□□□□ -1.13
SCM3YDL139C ULS1Q08562 1619 aa8.01□□□□□ -1.13
SCM3YDL139C PEX21P50091 288 aa8.01□□□□□ -1.13
SCM3YDL139C YPR015CQ12531 247 aa8.01□□□□□ -1.13
SCM3YDL139C CHD1P32657 1468 aa8□□□□□ -1.13
SCM3YDL139C RAM1P22007 431 aa8□□□□□ -1.13
SCM3YDL139C ORC6P38826 435 aa8□□□□□ -1.13
SCM3YDL139C RPA190P10964 1664 aaKnown RBP7.99□□□□□ -1.13
SCM3YDL139C YRR1Q12172 810 aa7.99□□□□□ -1.13
SCM3YDL139C SMC4Q12267 1418 aa7.99□□□□□ -1.13
SCM3YDL139C GAP1P19145 602 aaPredicted RBP7.98□□□□□ -1.13
SCM3YDL139C CSC1Q06538 782 aa7.97□□□□□ -1.13
SCM3YDL139C MLP2P40457 1679 aa7.96□□□□□ -1.13
SCM3YDL139C SPB4P25808 606 aaPredicted RBP7.96□□□□□ -1.14
SCM3YDL139C TUM1Q08686 304 aaKnown RBP7.95□□□□□ -1.14
SCM3YDL139C MAM3Q12296 706 aa7.95□□□□□ -1.14
SCM3YDL139C MYO4P32492 1471 aa7.94□□□□□ -1.14
SCM3YDL139C SNQ2P32568 1501 aaKnown RBP7.94□□□□□ -1.14
SCM3YDL139C TFB4Q12004 338 aa7.94□□□□□ -1.14
SCM3YDL139C DSF2P38213 736 aa7.92□□□□□ -1.14
SCM3YDL139C IES2P40154 320 aa7.92□□□□□ -1.14
SCM3YDL139C MVP1P40959 511 aaKnown RBP7.92□□□□□ -1.14
SCM3YDL139C VTH1P40438 1549 aa7.91□□□□□ -1.14
SCM3YDL139C VTH2P40890 1549 aa7.91□□□□□ -1.14
SCM3YDL139C NTE1Q04958 1679 aa7.9□□□□□ -1.14
SCM3YDL139C PDR15Q04182 1529 aaKnown RBP7.9□□□□□ -1.14
SCM3YDL139C TY3B-GQ99315 1547 aa7.9□□□□□ -1.14
SCM3YDL139C RGR1P19263 1082 aa7.9□□□□□ -1.14
SCM3YDL139C GYP1Q08484 637 aa7.9□□□□□ -1.14
SCM3YDL139C SPP41P38904 1435 aa7.89□□□□□ -1.15
SCM3YDL139C TAF7Q05021 590 aa7.89□□□□□ -1.15
SCM3YDL139C YPR109WQ06104 294 aa7.89□□□□□ -1.15
SCM3YDL139C PAN1P32521 1480 aa7.88□□□□□ -1.15
SCM3YDL139C NUD1P32336 851 aa7.88□□□□□ -1.15
SCM3YDL139C RPO21P04050 1733 aaKnown RBP7.88□□□□□ -1.15
SCM3YDL139C YRF1-1P0CX20 1796 aa7.87□□□□□ -1.15
SCM3YDL139C YRF1-5P0CX21 1796 aa7.87□□□□□ -1.15
SCM3YDL139C YRF1-8P0CX22 1796 aa7.87□□□□□ -1.15
SCM3YDL139C STR2P47164 639 aa7.87□□□□□ -1.15
SCM3YDL139C DPS1P04802 557 aaKnown RBP7.86□□□□□ -1.15
SCM3YDL139C RPN1P38764 993 aaKnown RBP7.86□□□□□ -1.15
SCM3YDL139C ISM1P48526 1002 aa7.86□□□□□ -1.15
SCM3YDL139C BUD20Q08004 166 aaPredicted RBP7.86□□□□□ -1.15
SCM3YDL139C YTA7P40340 1379 aa7.85□□□□□ -1.15
SCM3YDL139C PSE1P32337 1089 aaKnown RBP7.84□□□□□ -1.15
SCM3YDL139C YBT1P32386 1661 aa7.83□□□□□ -1.16
SCM3YDL139C NPL4P33755 580 aa7.83□□□□□ -1.16
SCM3YDL139C NUP42P49686 430 aaKnown RBP7.83□□□□□ -1.16
SCM3YDL139C DIT2P21595 489 aa7.82□□□□□ -1.16
SCM3YDL139C TSC11P40061 1430 aa7.82□□□□□ -1.16
SCM3YDL139C TRM732Q03496 1420 aa7.82□□□□□ -1.16
SCM3YDL139C SNT2P53127 1403 aa7.8□□□□□ -1.16
SCM3YDL139C PRT1P06103 763 aaKnown RBP7.8□□□□□ -1.16
SCM3YDL139C GCD11P32481 527 aaKnown RBP7.79□□□□□ -1.16
SCM3YDL139C IRC20Q06554 1556 aa7.79□□□□□ -1.16
SCM3YDL139C SAS4Q04003 481 aa7.78□□□□□ -1.16
SCM3YDL139C STH1P32597 1359 aa7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms