RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C MMS1Q06211 1407 aa8.59□□□□□ -1.03
CCR4YAL021C UBP10P53874 792 aaPredicted RBP8.58□□□□□ -1.04
CCR4YAL021C IMH1Q06704 911 aaKnown RBP8.58□□□□□ -1.04
CCR4YAL021C YVC1Q12324 675 aa8.58□□□□□ -1.04
CCR4YAL021C NOP56Q12460 504 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
CCR4YAL021C SSP1P38871 571 aa8.57□□□□□ -1.04
CCR4YAL021C PTP3P40048 928 aa8.57□□□□□ -1.04
CCR4YAL021C PKH1Q03407 766 aa8.57□□□□□ -1.04
CCR4YAL021C PUP2P32379 260 aa8.57□□□□□ -1.04
CCR4YAL021C UFD4P33202 1483 aa8.57□□□□□ -1.04
CCR4YAL021C CLN1P20437 546 aa8.56□□□□□ -1.04
CCR4YAL021C RSC1P53236 928 aa8.56□□□□□ -1.04
CCR4YAL021C DMA2P53924 522 aa8.56□□□□□ -1.04
CCR4YAL021C COG8Q04632 607 aa8.56□□□□□ -1.04
CCR4YAL021C TY4B-PA0A0B7P3V8 1104 aa8.56□□□□□ -1.04
CCR4YAL021C YDR341CQ05506 607 aaKnown RBP8.56□□□□□ -1.04
CCR4YAL021C RIX7Q07844 837 aaKnown RBP8.56□□□□□ -1.04
CCR4YAL021C OSW7P43611 510 aa8.55□□□□□ -1.04
CCR4YAL021C MON2P48563 1636 aaPredicted RBP8.55□□□□□ -1.04
CCR4YAL021C MGA2P40578 1113 aa8.55□□□□□ -1.04
CCR4YAL021C APL6P46682 809 aa8.54□□□□□ -1.04
CCR4YAL021C YMR124WP39523 943 aaKnown RBP8.54□□□□□ -1.04
CCR4YAL021C ORM2Q06144 216 aa8.54□□□□□ -1.04
CCR4YAL021C PSK2Q08217 1101 aa8.54□□□□□ -1.04
CCR4YAL021C YOR389WQ08912 624 aa8.54□□□□□ -1.04
CCR4YAL021C MAP2P38174 421 aaKnown RBP8.53□□□□□ -1.04
CCR4YAL021C NAB3P38996 802 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
CCR4YAL021C TAF1P46677 1066 aa8.53□□□□□ -1.04
CCR4YAL021C ITC1P53125 1264 aa8.53□□□□□ -1.04
CCR4YAL021C RTS3P53289 263 aa8.53□□□□□ -1.04
CCR4YAL021C MYO4P32492 1471 aa8.52□□□□□ -1.04
CCR4YAL021C LAM1P38851 1228 aa8.52□□□□□ -1.04
CCR4YAL021C AIM21P40563 679 aa8.52□□□□□ -1.04
CCR4YAL021C NDL1Q06568 189 aa8.52□□□□□ -1.04
CCR4YAL021C SSA4P22202 642 aaKnown RBP8.52□□□□□ -1.05
CCR4YAL021C TFG1P41895 735 aaPredicted RBP8.52□□□□□ -1.05
CCR4YAL021C RPL5P26321 297 aaKnown RBP8.51□□□□□ -1.05
CCR4YAL021C SWI3P32591 825 aa8.51□□□□□ -1.05
CCR4YAL021C OXP1P28273 1286 aa8.51□□□□□ -1.05
CCR4YAL021C SLP1Q12232 587 aa8.51□□□□□ -1.05
CCR4YAL021C SIT1P39980 628 aa8.5□□□□□ -1.05
CCR4YAL021C UBP1P25037 809 aa8.5□□□□□ -1.05
CCR4YAL021C ZDS1P50111 915 aaKnown RBP8.5□□□□□ -1.05
CCR4YAL021C GDE1Q02979 1223 aa8.5□□□□□ -1.05
CCR4YAL021C YAH1Q12184 172 aaKnown RBP8.5□□□□□ -1.05
CCR4YAL021C SCY1P53009 804 aa8.49□□□□□ -1.05
CCR4YAL021C XRN1P22147 1528 aaKnown RBP8.49□□□□□ -1.05
CCR4YAL021C CLB1P24868 471 aa8.48□□□□□ -1.05
CCR4YAL021C SPT5P27692 1063 aaKnown RBP8.48□□□□□ -1.05
CCR4YAL021C BRE1Q07457 700 aaKnown RBP8.48□□□□□ -1.05
CCR4YAL021C NOT3P06102 836 aaKnown RBP8.48□□□□□ -1.05
CCR4YAL021C GCD6P32501 712 aaKnown RBP8.48□□□□□ -1.05
CCR4YAL021C NPR3P38742 1146 aa8.48□□□□□ -1.05
CCR4YAL021C RPT2P40327 437 aaKnown RBP8.48□□□□□ -1.05
CCR4YAL021C YMR1P47147 688 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
CCR4YAL021C RRB1Q04225 511 aaKnown RBP8.48□□□□□ -1.05
CCR4YAL021C PEP1P32319 1579 aa8.48□□□□□ -1.05
CCR4YAL021C KEX2P13134 814 aa8.47□□□□□ -1.05
CCR4YAL021C PSO2P30620 661 aa8.47□□□□□ -1.05
CCR4YAL021C MMS22Q06164 1454 aa8.47□□□□□ -1.05
CCR4YAL021C PDR1P12383 1068 aa8.47□□□□□ -1.05
CCR4YAL021C YJR008WP47085 338 aa8.47□□□□□ -1.05
CCR4YAL021C HEL2Q05580 639 aaKnown RBP8.47□□□□□ -1.05
CCR4YAL021C LSP1Q12230 341 aaKnown RBP8.47□□□□□ -1.05
CCR4YAL021C LEU3P08638 886 aa8.46□□□□□ -1.05
CCR4YAL021C MEH1Q02205 184 aa8.46□□□□□ -1.05
CCR4YAL021C YLR257WQ06146 321 aaKnown RBP8.46□□□□□ -1.05
CCR4YAL021C MDM38Q08179 573 aa8.46□□□□□ -1.05
CCR4YAL021C SPB4P25808 606 aaPredicted RBP8.46□□□□□ -1.06
CCR4YAL021C GEF1P37020 779 aa8.46□□□□□ -1.06
CCR4YAL021C CHZ1P40019 153 aaPredicted RBP8.46□□□□□ -1.06
CCR4YAL021C VPS30Q02948 557 aa8.46□□□□□ -1.06
CCR4YAL021C ARR1Q06596 294 aa8.46□□□□□ -1.06
CCR4YAL021C GLE1Q12315 538 aa8.46□□□□□ -1.06
CCR4YAL021C SPP41P38904 1435 aa8.46□□□□□ -1.06
CCR4YAL021C ZUO1P32527 433 aaKnown RBP8.45□□□□□ -1.06
CCR4YAL021C SEC27P41811 889 aaKnown RBP8.45□□□□□ -1.06
CCR4YAL021C SRB8P25648 1427 aa8.45□□□□□ -1.06
CCR4YAL021C PSE1P32337 1089 aaKnown RBP8.45□□□□□ -1.06
CCR4YAL021C KNS1P32350 737 aaPredicted RBP8.45□□□□□ -1.06
CCR4YAL021C TY4A-JP47023 414 aa8.45□□□□□ -1.06
CCR4YAL021C HUL5P53119 910 aa8.45□□□□□ -1.06
CCR4YAL021C PXR1P53335 271 aaPredicted RBP8.45□□□□□ -1.06
CCR4YAL021C EDE1P34216 1381 aa8.45□□□□□ -1.06
CCR4YAL021C RAD2P07276 1031 aa8.44□□□□□ -1.06
CCR4YAL021C KAR3P17119 729 aa8.44□□□□□ -1.06
CCR4YAL021C IES2P40154 320 aa8.44□□□□□ -1.06
CCR4YAL021C BNI4P53858 892 aa8.44□□□□□ -1.06
CCR4YAL021C YPR172WQ06608 200 aa8.44□□□□□ -1.06
CCR4YAL021C NOP14Q99207 810 aaKnown RBP8.44□□□□□ -1.06
CCR4YAL021C SWH1P35845 1188 aa8.44□□□□□ -1.06
CCR4YAL021C ALD2P47771 506 aa8.44□□□□□ -1.06
CCR4YAL021C RRP9Q06506 573 aaKnown RBP8.43□□□□□ -1.06
CCR4YAL021C JJJ1P53863 590 aa8.43□□□□□ -1.06
CCR4YAL021C FAR11P53917 953 aa8.43□□□□□ -1.06
CCR4YAL021C SYH1Q02875 849 aaKnown RBP8.43□□□□□ -1.06
CCR4YAL021C UTP4Q06679 776 aaKnown RBP8.43□□□□□ -1.06
CCR4YAL021C BCH2P36122 765 aa8.42□□□□□ -1.06
CCR4YAL021C SSF1P38789 453 aaPredicted RBP8.42□□□□□ -1.06
CCR4YAL021C NMD3P38861 518 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms