RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 RGS3P49796 1198 aa16.15■□□□□ 0.18
MATR3-227ENST00000618441 FANCD2Q9BXW9 1451 aa16.14■□□□□ 0.17
MATR3-227ENST00000618441 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
MATR3-227ENST00000618441 EXOC6Q8TAG9 804 aa16.13■□□□□ 0.17
MATR3-227ENST00000618441 CFTRP13569 1480 aa16.13■□□□□ 0.17
MATR3-227ENST00000618441 RRP9O43818 475 aaKnown RBP16.12■□□□□ 0.17
MATR3-227ENST00000618441 EEA1Q15075 1411 aa16.12■□□□□ 0.17
MATR3-227ENST00000618441 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
MATR3-227ENST00000618441 TCERG1O14776 1098 aaKnown RBP16.11■□□□□ 0.17
MATR3-227ENST00000618441 CUX1P39880 1505 aa16.11■□□□□ 0.17
MATR3-227ENST00000618441 SLKQ9H2G2 1235 aaPredicted RBP16.11■□□□□ 0.17
MATR3-227ENST00000618441 POGKQ9P215 609 aa16.1■□□□□ 0.17
MATR3-227ENST00000618441 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
MATR3-227ENST00000618441 HMGXB3Q12766 1538 aa16.08■□□□□ 0.17
MATR3-227ENST00000618441 BACH2Q9BYV9 841 aa16.08■□□□□ 0.16
MATR3-227ENST00000618441 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
MATR3-227ENST00000618441 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
MATR3-227ENST00000618441 FGD5Q6ZNL6 1462 aa16.06■□□□□ 0.16
MATR3-227ENST00000618441 AAMPQ13685 434 aa16.05■□□□□ 0.16
MATR3-227ENST00000618441 SPRYD3Q8NCJ5 442 aa16.05■□□□□ 0.16
MATR3-227ENST00000618441 ZBED9Q6R2W3 1325 aa16.05■□□□□ 0.16
MATR3-227ENST00000618441 NUDCQ9Y266 331 aa16.04■□□□□ 0.16
MATR3-227ENST00000618441 HSPA5P11021 654 aaKnown RBP16.02■□□□□ 0.15
MATR3-227ENST00000618441 IGF1RP08069 1367 aa16.01■□□□□ 0.15
MATR3-227ENST00000618441 CCNB3Q8WWL7 1395 aa16■□□□□ 0.15
MATR3-227ENST00000618441 L1TD1Q5T7N2 865 aaKnown RBP16■□□□□ 0.15
MATR3-227ENST00000618441 PLIN1O60240 522 aa16■□□□□ 0.15
MATR3-227ENST00000618441 TRIM44Q96DX7 344 aaPredicted RBP15.99■□□□□ 0.15
MATR3-227ENST00000618441 ERCC6Q03468 1493 aa15.99■□□□□ 0.15
MATR3-227ENST00000618441 PRKRIP1Q9H875 184 aaPredicted RBP15.98■□□□□ 0.15
MATR3-227ENST00000618441 ZHX1Q9UKY1 873 aaPredicted RBP15.98■□□□□ 0.15
MATR3-227ENST00000618441 FAM13BQ9NYF5 915 aa15.97■□□□□ 0.15
MATR3-227ENST00000618441 PANK2Q9BZ23 570 aa15.96■□□□□ 0.15
MATR3-227ENST00000618441 ZNF526Q8TF50 670 aaPredicted RBP15.96■□□□□ 0.15
MATR3-227ENST00000618441 PRDM10Q9NQV6 1147 aa15.96■□□□□ 0.14
MATR3-227ENST00000618441 ZNF326Q5BKZ1 582 aaKnown RBP15.95■□□□□ 0.14
MATR3-227ENST00000618441 TMC1Q8TDI8 760 aa15.95■□□□□ 0.14
MATR3-227ENST00000618441 GOLGA6L3A6NEY3 463 aa15.95■□□□□ 0.14
MATR3-227ENST00000618441 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
MATR3-227ENST00000618441 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
MATR3-227ENST00000618441 ZBTB7CA1YPR0 619 aa15.94■□□□□ 0.14
MATR3-227ENST00000618441 EIF4G2P78344 907 aaKnown RBP eCLIP15.94■□□□□ 0.14
MATR3-227ENST00000618441 TMEM132AQ24JP5 1023 aa15.92■□□□□ 0.14
MATR3-227ENST00000618441 BBXQ8WY36 941 aaPredicted RBP15.92■□□□□ 0.14
MATR3-227ENST00000618441 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.144e-7■■■■□ 22.7
MATR3-227ENST00000618441 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
MATR3-227ENST00000618441 FBXO3Q9UK99 471 aa15.9■□□□□ 0.14
MATR3-227ENST00000618441 RRP1P56182 461 aaKnown RBP15.88■□□□□ 0.13
MATR3-227ENST00000618441 POLA1P09884 1462 aaPredicted RBP15.88■□□□□ 0.13
MATR3-227ENST00000618441 RCAN3Q9UKA8 241 aa15.88■□□□□ 0.13
MATR3-227ENST00000618441 SETD5Q9C0A6 1442 aa15.87■□□□□ 0.13
MATR3-227ENST00000618441 MAPK8IP2Q13387 824 aaPredicted RBP15.87■□□□□ 0.13
MATR3-227ENST00000618441 FHOD3Q2V2M9 1422 aa15.87■□□□□ 0.13
MATR3-227ENST00000618441 MS4A1P11836 297 aa15.87■□□□□ 0.13
MATR3-227ENST00000618441 MYH16Q9H6N6 1097 aa15.87■□□□□ 0.13
MATR3-227ENST00000618441 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
MATR3-227ENST00000618441 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
MATR3-227ENST00000618441 IGSF3O75054 1194 aa15.85■□□□□ 0.13
MATR3-227ENST00000618441 XRCC6P12956 609 aaKnown RBP eCLIP15.85■□□□□ 0.139e-7■□□□□ 8.5
MATR3-227ENST00000618441 PLCB2Q00722 1185 aa15.85■□□□□ 0.13
MATR3-227ENST00000618441 CCDC9Q9Y3X0 531 aaKnown RBP15.85■□□□□ 0.13
MATR3-227ENST00000618441 CHIC2Q9UKJ5 165 aa15.84■□□□□ 0.13
MATR3-227ENST00000618441 CLCN1P35523 988 aa15.84■□□□□ 0.13
MATR3-227ENST00000618441 PDCL3Q9H2J4 239 aa15.83■□□□□ 0.12
MATR3-227ENST00000618441 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
MATR3-227ENST00000618441 KIAA1211Q6ZU35 1233 aa15.82■□□□□ 0.12
MATR3-227ENST00000618441 CRBNQ96SW2 442 aa15.82■□□□□ 0.12
MATR3-227ENST00000618441 ESPNB1AK53 854 aa15.81■□□□□ 0.12
MATR3-227ENST00000618441 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
MATR3-227ENST00000618441 URB2Q14146 1524 aaKnown RBP15.81■□□□□ 0.12
MATR3-227ENST00000618441 HSP90B1P14625 803 aaKnown RBP15.8■□□□□ 0.12
MATR3-227ENST00000618441 PLCD3Q8N3E9 789 aa15.8■□□□□ 0.12
MATR3-227ENST00000618441 ZNF777Q9ULD5 760 aaPredicted RBP15.8■□□□□ 0.12
MATR3-227ENST00000618441 BECN1Q14457 450 aa15.79■□□□□ 0.12
MATR3-227ENST00000618441 KIF21BO75037 1637 aa15.79■□□□□ 0.12
MATR3-227ENST00000618441 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
MATR3-227ENST00000618441 CANXP27824 592 aaKnown RBP15.78■□□□□ 0.12
MATR3-227ENST00000618441 FAM161AQ3B820 660 aa15.77■□□□□ 0.11
MATR3-227ENST00000618441 NAP1L2Q9ULW6 460 aaPredicted RBP15.76■□□□□ 0.11
MATR3-227ENST00000618441 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
MATR3-227ENST00000618441 R3HCC1Q9Y3T6 440 aaKnown RBP15.75■□□□□ 0.11
MATR3-227ENST00000618441 SMG6Q86US8 1419 aaKnown RBP15.75■□□□□ 0.11
MATR3-227ENST00000618441 VGLL3A8MV65 326 aa15.75■□□□□ 0.11
MATR3-227ENST00000618441 CALD1Q05682 793 aaKnown RBP15.75■□□□□ 0.11
MATR3-227ENST00000618441 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
MATR3-227ENST00000618441 PPP6R1Q9UPN7 881 aa15.74■□□□□ 0.11
MATR3-227ENST00000618441 TNNT2P45379 298 aaPredicted RBP15.74■□□□□ 0.11
MATR3-227ENST00000618441 ANP32BQ92688 251 aaKnown RBP15.74■□□□□ 0.11
MATR3-227ENST00000618441 CDCA7LQ96GN5 454 aa15.73■□□□□ 0.11
MATR3-227ENST00000618441 TPM2P07951 284 aa15.73■□□□□ 0.11
MATR3-227ENST00000618441 ARHGAP35Q9NRY4 1499 aa15.72■□□□□ 0.11
MATR3-227ENST00000618441 FOXD1Q16676 465 aa15.72■□□□□ 0.11
MATR3-227ENST00000618441 MTUS2Q5JR59 1369 aa15.72■□□□□ 0.11
MATR3-227ENST00000618441 MSNP26038 577 aaKnown RBP15.71■□□□□ 0.11
MATR3-227ENST00000618441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.71■□□□□ 0.11
MATR3-227ENST00000618441 ZNF608Q9ULD9 1512 aaPredicted RBP15.71■□□□□ 0.1
MATR3-227ENST00000618441 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
MATR3-227ENST00000618441 PRDM4Q9UKN5 801 aa15.7■□□□□ 0.1
MATR3-227ENST00000618441 RRP7BPQ9NSQ0 103 aa15.69■□□□□ 0.1
MATR3-227ENST00000618441 CNPY4Q8N129 248 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms