RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 LRRC9Q6ZRR7 1453 aa12.49□□□□□ -0.41
TARDBP-213ENST00000611963 ARID3CA6NKF2 412 aa12.48□□□□□ -0.41
TARDBP-213ENST00000611963 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
TARDBP-213ENST00000611963 NUP153P49790 1475 aaKnown RBP12.47□□□□□ -0.41
TARDBP-213ENST00000611963 CCDC18Q5T9S5 1454 aa12.47□□□□□ -0.41
TARDBP-213ENST00000611963 WDR7Q9Y4E6 1490 aa12.47□□□□□ -0.41
TARDBP-213ENST00000611963 CAPN15O75808 1086 aa12.47□□□□□ -0.41
TARDBP-213ENST00000611963 MAP3K4Q9Y6R4 1608 aa12.46□□□□□ -0.41
TARDBP-213ENST00000611963 ATP10BO94823 1461 aa12.46□□□□□ -0.42
TARDBP-213ENST00000611963 KDM6BO15054 1643 aa12.45□□□□□ -0.42
TARDBP-213ENST00000611963 MAGI3Q5TCQ9 1506 aa12.44□□□□□ -0.42
TARDBP-213ENST00000611963 MTUS2Q5JR59 1369 aa12.43□□□□□ -0.42
TARDBP-213ENST00000611963 COL17A1Q9UMD9 1497 aaPredicted RBP12.42□□□□□ -0.42
TARDBP-213ENST00000611963 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
TARDBP-213ENST00000611963 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.42
TARDBP-213ENST00000611963 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
TARDBP-213ENST00000611963 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-213ENST00000611963 PHLDB1Q86UU1 1377 aa12.38□□□□□ -0.43
TARDBP-213ENST00000611963 TEX14Q8IWB6 1497 aa12.38□□□□□ -0.43
TARDBP-213ENST00000611963 CD109Q6YHK3 1445 aa12.37□□□□□ -0.43
TARDBP-213ENST00000611963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.37□□□□□ -0.43
TARDBP-213ENST00000611963 HNRNPUL2Q1KMD3 747 aaKnown RBP12.37□□□□□ -0.43
TARDBP-213ENST00000611963 NCOA2Q15596 1464 aa12.36□□□□□ -0.43
TARDBP-213ENST00000611963 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
TARDBP-213ENST00000611963 RRBP1Q9P2E9 1410 aaKnown RBP12.35□□□□□ -0.43
TARDBP-213ENST00000611963 ABCA9Q8IUA7 1624 aa12.33□□□□□ -0.43
TARDBP-213ENST00000611963 TROQ12816 1431 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-213ENST00000611963 KIF14Q15058 1648 aa12.33□□□□□ -0.44
TARDBP-213ENST00000611963 CCNB3Q8WWL7 1395 aa12.32□□□□□ -0.44
TARDBP-213ENST00000611963 CDK11AQ9UQ88 783 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-213ENST00000611963 ABCB7O75027 752 aa12.3□□□□□ -0.44
TARDBP-213ENST00000611963 MYOM3Q5VTT5 1437 aa12.29□□□□□ -0.44
TARDBP-213ENST00000611963 FGD6Q6ZV73 1430 aa12.29□□□□□ -0.44
TARDBP-213ENST00000611963 KDM4FA0A1W2PPD8 638 aa12.29□□□□□ -0.44
TARDBP-213ENST00000611963 DSG3P32926 999 aa12.29□□□□□ -0.44
TARDBP-213ENST00000611963 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.44
TARDBP-213ENST00000611963 PTPN23Q9H3S7 1636 aa12.27□□□□□ -0.44
TARDBP-213ENST00000611963 PLEKHD1A6NEE1 506 aa12.27□□□□□ -0.45
TARDBP-213ENST00000611963 FAM50AQ14320 339 aaKnown RBP12.27□□□□□ -0.45
TARDBP-213ENST00000611963 CDC42BPAQ5VT25 1732 aa12.26□□□□□ -0.45
TARDBP-213ENST00000611963 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.26□□□□□ -0.45
TARDBP-213ENST00000611963 ITSN2Q9NZM3 1697 aa12.25□□□□□ -0.45
TARDBP-213ENST00000611963 ITGAEP38570 1179 aa12.24□□□□□ -0.45
TARDBP-213ENST00000611963 TTC37Q6PGP7 1564 aa12.24□□□□□ -0.45
TARDBP-213ENST00000611963 NEO1Q92859 1461 aa12.24□□□□□ -0.45
TARDBP-213ENST00000611963 GPATCH8Q9UKJ3 1502 aaKnown RBP12.21□□□□□ -0.45
TARDBP-213ENST00000611963 ADGRL1O94910 1474 aa12.21□□□□□ -0.45
TARDBP-213ENST00000611963 TCOF1Q13428 1488 aaKnown RBP12.21□□□□□ -0.45
TARDBP-213ENST00000611963 RAPGEF3O95398 923 aa12.21□□□□□ -0.45
TARDBP-213ENST00000611963 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.45
TARDBP-213ENST00000611963 FRMPD1Q5SYB0 1578 aa12.21□□□□□ -0.46
TARDBP-213ENST00000611963 MIA2Q96PC5 1412 aa12.2□□□□□ -0.46
TARDBP-213ENST00000611963 CDC42BPBQ9Y5S2 1711 aa12.2□□□□□ -0.46
TARDBP-213ENST00000611963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.2□□□□□ -0.46
TARDBP-213ENST00000611963 PREX2Q70Z35 1606 aa12.19□□□□□ -0.46
TARDBP-213ENST00000611963 MYO5CQ9NQX4 1742 aa12.19□□□□□ -0.46
TARDBP-213ENST00000611963 FANCAO15360 1455 aa12.19□□□□□ -0.46
TARDBP-213ENST00000611963 AKNAQ7Z591 1439 aa12.18□□□□□ -0.46
TARDBP-213ENST00000611963 ZNF644Q9H582 1327 aaPredicted RBP12.17□□□□□ -0.46
TARDBP-213ENST00000611963 CFDP1Q9UEE9 299 aaPredicted RBP12.17□□□□□ -0.46
TARDBP-213ENST00000611963 PLCH2O75038 1416 aa12.17□□□□□ -0.46
TARDBP-213ENST00000611963 CAMSAP2Q08AD1 1489 aa12.16□□□□□ -0.46
TARDBP-213ENST00000611963 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
TARDBP-213ENST00000611963 DENND4BO75064 1496 aaPredicted RBP12.15□□□□□ -0.46
TARDBP-213ENST00000611963 RICTORQ6R327 1708 aa12.15□□□□□ -0.46
TARDBP-213ENST00000611963 CFAP74Q9C0B2 1584 aa12.15□□□□□ -0.46
TARDBP-213ENST00000611963 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
TARDBP-213ENST00000611963 DNMT1P26358 1616 aaKnown RBP12.15□□□□□ -0.47
TARDBP-213ENST00000611963 ARHGAP5Q13017 1502 aa12.13□□□□□ -0.47
TARDBP-213ENST00000611963 SAMD9LQ8IVG5 1584 aa12.13□□□□□ -0.47
TARDBP-213ENST00000611963 CROCC2H7BZ55 1655 aa12.13□□□□□ -0.47
TARDBP-213ENST00000611963 POLA2Q14181 598 aa12.12□□□□□ -0.47
TARDBP-213ENST00000611963 DAPK1P53355 1430 aa12.11□□□□□ -0.47
TARDBP-213ENST00000611963 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
TARDBP-213ENST00000611963 ARHGEF40Q8TER5 1519 aa12.11□□□□□ -0.47
TARDBP-213ENST00000611963 ABCC5O15440 1437 aa12.11□□□□□ -0.47
TARDBP-213ENST00000611963 SCAPERQ9BY12 1400 aa12.11□□□□□ -0.47
TARDBP-213ENST00000611963 CHIC2Q9UKJ5 165 aa12.1□□□□□ -0.47
TARDBP-213ENST00000611963 POGZQ7Z3K3 1410 aa12.1□□□□□ -0.47
TARDBP-213ENST00000611963 SETD5Q9C0A6 1442 aa12.1□□□□□ -0.47
TARDBP-213ENST00000611963 EFCAB2Q5VUJ9 269 aa12.09□□□□□ -0.47
TARDBP-213ENST00000611963 YEATS2Q9ULM3 1422 aa12.09□□□□□ -0.47
TARDBP-213ENST00000611963 ADGBQ8N7X0 1667 aa12.09□□□□□ -0.47
TARDBP-213ENST00000611963 RAB3GAP2Q9H2M9 1393 aa12.08□□□□□ -0.48
TARDBP-213ENST00000611963 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
TARDBP-213ENST00000611963 GCC2Q8IWJ2 1684 aa12.08□□□□□ -0.48
TARDBP-213ENST00000611963 HRCP23327 699 aa12.08□□□□□ -0.48
TARDBP-213ENST00000611963 CCER1Q8TC90 406 aaPredicted RBP12.08□□□□□ -0.48
TARDBP-213ENST00000611963 ADAMTSL3P82987 1691 aa12.07□□□□□ -0.48
TARDBP-213ENST00000611963 ARHGEF5Q12774 1597 aa12.07□□□□□ -0.48
TARDBP-213ENST00000611963 ZFYVE16Q7Z3T8 1539 aa12.06□□□□□ -0.48
TARDBP-213ENST00000611963 SIGLEC1Q9BZZ2 1709 aa12.06□□□□□ -0.48
TARDBP-213ENST00000611963 HFM1A2PYH4 1435 aa12.06□□□□□ -0.48
TARDBP-213ENST00000611963 RRP7BPQ9NSQ0 103 aa12.06□□□□□ -0.48
TARDBP-213ENST00000611963 MAGI2Q86UL8 1455 aa12.06□□□□□ -0.48
TARDBP-213ENST00000611963 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
TARDBP-213ENST00000611963 NAIPQ13075 1403 aa12.05□□□□□ -0.48
TARDBP-213ENST00000611963 ATXN8OSP0DMR3 200 aa12.05□□□□□ -0.48
TARDBP-213ENST00000611963 HNRNPMP52272 730 aaKnown RBP eCLIP12.05□□□□□ -0.48
TARDBP-213ENST00000611963 ABCC1P33527 1531 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms