RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 HECW1Q76N89 1606 aa16.61■□□□□ 0.25
TP53-220ENST00000610623 ERICH6BQ5W0A0 696 aa16.61■□□□□ 0.25
TP53-220ENST00000610623 EHBP1L1Q8N3D4 1523 aa16.6■□□□□ 0.25
TP53-220ENST00000610623 DEKP35659 375 aaKnown RBP16.59■□□□□ 0.25
TP53-220ENST00000610623 KIAA0586Q9BVV6 1533 aa16.59■□□□□ 0.25
TP53-220ENST00000610623 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
TP53-220ENST00000610623 RAB3GAP2Q9H2M9 1393 aa16.58■□□□□ 0.25
TP53-220ENST00000610623 SUPT6HQ7KZ85 1726 aaKnown RBP16.58■□□□□ 0.24
TP53-220ENST00000610623 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
TP53-220ENST00000610623 KIAA0556O60303 1618 aa16.54■□□□□ 0.24
TP53-220ENST00000610623 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
TP53-220ENST00000610623 FGD6Q6ZV73 1430 aa16.53■□□□□ 0.24
TP53-220ENST00000610623 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.24
TP53-220ENST00000610623 NCOA2Q15596 1464 aa16.51■□□□□ 0.23
TP53-220ENST00000610623 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
TP53-220ENST00000610623 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
TP53-220ENST00000610623 EPRSP07814 1512 aaKnown RBP16.49■□□□□ 0.23
TP53-220ENST00000610623 DISP1Q96F81 1524 aa16.49■□□□□ 0.23
TP53-220ENST00000610623 MYOM3Q5VTT5 1437 aa16.49■□□□□ 0.23
TP53-220ENST00000610623 DAXXQ9UER7 740 aaPredicted RBP16.48■□□□□ 0.23
TP53-220ENST00000610623 VSIG10Q8N0Z9 540 aa16.48■□□□□ 0.23
TP53-220ENST00000610623 PPP4R2Q9NY27 417 aa16.48■□□□□ 0.23
TP53-220ENST00000610623 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
TP53-220ENST00000610623 MAGI3Q5TCQ9 1506 aa16.46■□□□□ 0.22
TP53-220ENST00000610623 NUP160Q12769 1436 aa16.44■□□□□ 0.22
TP53-220ENST00000610623 RAPGEF6Q8TEU7 1601 aa16.44■□□□□ 0.22
TP53-220ENST00000610623 CHMP7Q8WUX9 453 aaPredicted RBP16.44■□□□□ 0.22
TP53-220ENST00000610623 PTPN23Q9H3S7 1636 aa16.43■□□□□ 0.22
TP53-220ENST00000610623 SIN3AQ96ST3 1273 aa16.43■□□□□ 0.22
TP53-220ENST00000610623 NOP58Q9Y2X3 529 aaKnown RBP16.42■□□□□ 0.22
TP53-220ENST00000610623 CDK13Q14004 1512 aaKnown RBP16.41■□□□□ 0.22
TP53-220ENST00000610623 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
TP53-220ENST00000610623 TCOF1Q13428 1488 aaKnown RBP16.41■□□□□ 0.22
TP53-220ENST00000610623 CARMIL2Q6F5E8 1435 aa16.38■□□□□ 0.21
TP53-220ENST00000610623 IRX6P78412 446 aaPredicted RBP16.38■□□□□ 0.21
TP53-220ENST00000610623 MIA2Q96PC5 1412 aa16.37■□□□□ 0.21
TP53-220ENST00000610623 NUP153P49790 1475 aaKnown RBP16.37■□□□□ 0.21
TP53-220ENST00000610623 HFM1A2PYH4 1435 aa16.36■□□□□ 0.21
TP53-220ENST00000610623 HIRIP3Q9BW71 556 aaPredicted RBP16.35■□□□□ 0.21
TP53-220ENST00000610623 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
TP53-220ENST00000610623 FBXO3Q9UK99 471 aa16.35■□□□□ 0.21
TP53-220ENST00000610623 KDM2AQ9Y2K7 1162 aa16.33■□□□□ 0.2
TP53-220ENST00000610623 GCC2Q8IWJ2 1684 aa16.32■□□□□ 0.2
TP53-220ENST00000610623 PTPRKQ15262 1439 aa16.31■□□□□ 0.2
TP53-220ENST00000610623 AKNAQ7Z591 1439 aa16.31■□□□□ 0.2
TP53-220ENST00000610623 FBLN2P98095 1184 aa16.31■□□□□ 0.2
TP53-220ENST00000610623 NBR1Q14596 966 aa16.3■□□□□ 0.2
TP53-220ENST00000610623 ADCY10Q96PN6 1610 aa16.3■□□□□ 0.2
TP53-220ENST00000610623 JPH4Q96JJ6 628 aa16.29■□□□□ 0.2
TP53-220ENST00000610623 VASPP50552 380 aaPredicted RBP16.29■□□□□ 0.2
TP53-220ENST00000610623 NAIPQ13075 1403 aa16.29■□□□□ 0.2
TP53-220ENST00000610623 TONSLQ96HA7 1378 aa16.28■□□□□ 0.2
TP53-220ENST00000610623 TULP1O00294 542 aaPredicted RBP16.28■□□□□ 0.2
TP53-220ENST00000610623 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
TP53-220ENST00000610623 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
TP53-220ENST00000610623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.28■□□□□ 0.2
TP53-220ENST00000610623 ITSN2Q9NZM3 1697 aa16.28■□□□□ 0.2
TP53-220ENST00000610623 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
TP53-220ENST00000610623 UACAQ9BZF9 1416 aa16.27■□□□□ 0.2
TP53-220ENST00000610623 CHD1O14646 1710 aa16.27■□□□□ 0.2
TP53-220ENST00000610623 ABCA8O94911 1581 aa16.27■□□□□ 0.19
TP53-220ENST00000610623 TROQ12816 1431 aaPredicted RBP16.27■□□□□ 0.19
TP53-220ENST00000610623 IFNLR1Q8IU57 520 aaPredicted RBP16.27■□□□□ 0.19
TP53-220ENST00000610623 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.19
TP53-220ENST00000610623 PLB1Q6P1J6 1458 aa16.25■□□□□ 0.19
TP53-220ENST00000610623 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
TP53-220ENST00000610623 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
TP53-220ENST00000610623 IPO9Q96P70 1041 aaKnown RBP16.25■□□□□ 0.19
TP53-220ENST00000610623 ANP32AP39687 249 aaKnown RBP16.24■□□□□ 0.19
TP53-220ENST00000610623 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
TP53-220ENST00000610623 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
TP53-220ENST00000610623 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
TP53-220ENST00000610623 PKD2Q13563 968 aa16.22■□□□□ 0.19
TP53-220ENST00000610623 ZBED9Q6R2W3 1325 aa16.21■□□□□ 0.19
TP53-220ENST00000610623 ARID3CA6NKF2 412 aa16.2■□□□□ 0.18
TP53-220ENST00000610623 ARXQ96QS3 562 aa16.2■□□□□ 0.18
TP53-220ENST00000610623 SHROOM2Q13796 1616 aa16.2■□□□□ 0.18
TP53-220ENST00000610623 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
TP53-220ENST00000610623 ZNF219Q9P2Y4 722 aaPredicted RBP16.19■□□□□ 0.18
TP53-220ENST00000610623 ROCK1Q13464 1354 aa16.19■□□□□ 0.18
TP53-220ENST00000610623 DAPK1P53355 1430 aa16.19■□□□□ 0.18
TP53-220ENST00000610623 PRG4Q92954 1404 aaPredicted RBP16.18■□□□□ 0.18
TP53-220ENST00000610623 KIF14Q15058 1648 aa16.17■□□□□ 0.18
TP53-220ENST00000610623 ADGBQ8N7X0 1667 aa16.15■□□□□ 0.18
TP53-220ENST00000610623 WASHC2AQ641Q2 1341 aa16.15■□□□□ 0.18
TP53-220ENST00000610623 ATP10BO94823 1461 aa16.14■□□□□ 0.17
TP53-220ENST00000610623 CAMSAP2Q08AD1 1489 aa16.14■□□□□ 0.17
TP53-220ENST00000610623 GPATCH8Q9UKJ3 1502 aaKnown RBP16.14■□□□□ 0.17
TP53-220ENST00000610623 ABCC5O15440 1437 aa16.14■□□□□ 0.17
TP53-220ENST00000610623 CROCC2H7BZ55 1655 aa16.14■□□□□ 0.17
TP53-220ENST00000610623 PROM2Q8N271 834 aa16.13■□□□□ 0.17
TP53-220ENST00000610623 USP35Q9P2H5 1018 aa16.13■□□□□ 0.17
TP53-220ENST00000610623 PTPRGP23470 1445 aa16.13■□□□□ 0.17
TP53-220ENST00000610623 CNTLNQ9NXG0 1405 aa16.12■□□□□ 0.17
TP53-220ENST00000610623 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
TP53-220ENST00000610623 CDC42BPAQ5VT25 1732 aa16.12■□□□□ 0.17
TP53-220ENST00000610623 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
TP53-220ENST00000610623 RRP7BPQ9NSQ0 103 aa16.12■□□□□ 0.17
TP53-220ENST00000610623 KDM6BO15054 1643 aa16.11■□□□□ 0.17
TP53-220ENST00000610623 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms