RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 TSPYL2Q9H2G4 693 aaPredicted RBP14.36□□□□□ -0.11
DNMT1-224ENST00000591764 PTPRGP23470 1445 aa14.34□□□□□ -0.11
DNMT1-224ENST00000591764 TSPOAP1O95153 1857 aa14.34□□□□□ -0.11
DNMT1-224ENST00000591764 LHX8Q68G74 356 aa14.34□□□□□ -0.11
DNMT1-224ENST00000591764 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
DNMT1-224ENST00000591764 TNIKQ9UKE5 1360 aa14.31□□□□□ -0.12
DNMT1-224ENST00000591764 ABCC2Q92887 1545 aa14.31□□□□□ -0.12
DNMT1-224ENST00000591764 PLCD3Q8N3E9 789 aa14.3□□□□□ -0.12
DNMT1-224ENST00000591764 IQGAP2Q13576 1575 aa14.3□□□□□ -0.12
DNMT1-224ENST00000591764 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
DNMT1-224ENST00000591764 PLB1Q6P1J6 1458 aa14.29□□□□□ -0.12
DNMT1-224ENST00000591764 RASEFQ8IZ41 740 aa14.28□□□□□ -0.12
DNMT1-224ENST00000591764 MS4A3Q96HJ5 214 aa14.28□□□□□ -0.12
DNMT1-224ENST00000591764 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
DNMT1-224ENST00000591764 TTBK1Q5TCY1 1321 aaPredicted RBP14.27□□□□□ -0.12
DNMT1-224ENST00000591764 ASXL2Q76L83 1435 aa14.25□□□□□ -0.13
DNMT1-224ENST00000591764 GLI2P10070 1586 aa14.25□□□□□ -0.13
DNMT1-224ENST00000591764 UHRF1BP1LA0JNW5 1464 aa14.25□□□□□ -0.13
DNMT1-224ENST00000591764 UACAQ9BZF9 1416 aa14.23□□□□□ -0.13
DNMT1-224ENST00000591764 KDM4FA0A1W2PPD8 638 aa14.22□□□□□ -0.13
DNMT1-224ENST00000591764 TEX14Q8IWB6 1497 aa14.21□□□□□ -0.13
DNMT1-224ENST00000591764 PPRC1Q5VV67 1664 aaKnown RBP14.18□□□□□ -0.14
DNMT1-224ENST00000591764 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
DNMT1-224ENST00000591764 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
DNMT1-224ENST00000591764 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
DNMT1-224ENST00000591764 DISP1Q96F81 1524 aa14.17□□□□□ -0.14
DNMT1-224ENST00000591764 UGGT2Q9NYU1 1516 aa14.17□□□□□ -0.14
DNMT1-224ENST00000591764 KDM5BQ9UGL1 1544 aa14.17□□□□□ -0.14
DNMT1-224ENST00000591764 EPRSP07814 1512 aaKnown RBP14.16□□□□□ -0.14
DNMT1-224ENST00000591764 NUBP1P53384 320 aa14.16□□□□□ -0.14
DNMT1-224ENST00000591764 MAP3K4Q9Y6R4 1608 aa14.15□□□□□ -0.14
DNMT1-224ENST00000591764 KIAA0556O60303 1618 aa14.15□□□□□ -0.14
DNMT1-224ENST00000591764 ZCCHC11Q5TAX3 1644 aaKnown RBP14.15□□□□□ -0.14
DNMT1-224ENST00000591764 ADGRL1O94910 1474 aa14.14□□□□□ -0.15
DNMT1-224ENST00000591764 ASTLQ6HA08 431 aaPredicted RBP14.12□□□□□ -0.15
DNMT1-224ENST00000591764 MAP3K13O43283 966 aa14.11□□□□□ -0.15
DNMT1-224ENST00000591764 ATMINO43313 823 aaPredicted RBP14.11□□□□□ -0.15
DNMT1-224ENST00000591764 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
DNMT1-224ENST00000591764 TRPC6Q9Y210 931 aa14.11□□□□□ -0.15
DNMT1-224ENST00000591764 GOLGA3Q08378 1498 aa14.11□□□□□ -0.15
DNMT1-224ENST00000591764 WDR7Q9Y4E6 1490 aa14.11□□□□□ -0.15
DNMT1-224ENST00000591764 FAM9AQ8IZU1 332 aaPredicted RBP14.09□□□□□ -0.15
DNMT1-224ENST00000591764 CTTNBP2Q8WZ74 1663 aa14.09□□□□□ -0.15
DNMT1-224ENST00000591764 POTEB2H3BUK9 544 aa14.08□□□□□ -0.16
DNMT1-224ENST00000591764 FBXO3Q9UK99 471 aa14.08□□□□□ -0.16
DNMT1-224ENST00000591764 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
DNMT1-224ENST00000591764 CFAP43Q8NDM7 1665 aa14.05□□□□□ -0.16
DNMT1-224ENST00000591764 CD109Q6YHK3 1445 aa14.04□□□□□ -0.16
DNMT1-224ENST00000591764 ATN1P54259 1190 aaPredicted RBP14.03□□□□□ -0.16
DNMT1-224ENST00000591764 MAGI3Q5TCQ9 1506 aa14.03□□□□□ -0.16
DNMT1-224ENST00000591764 HECW2Q9P2P5 1572 aa14.02□□□□□ -0.16
DNMT1-224ENST00000591764 BMP2KQ9NSY1 1161 aaPredicted RBP14.02□□□□□ -0.17
DNMT1-224ENST00000591764 ILDR1Q86SU0 546 aaPredicted RBP14.01□□□□□ -0.17
DNMT1-224ENST00000591764 ABCA8O94911 1581 aa14□□□□□ -0.17
DNMT1-224ENST00000591764 METRNQ9UJH8 293 aa14□□□□□ -0.17
DNMT1-224ENST00000591764 VASPP50552 380 aaPredicted RBP13.99□□□□□ -0.17
DNMT1-224ENST00000591764 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
DNMT1-224ENST00000591764 KCNH8Q96L42 1107 aa13.98□□□□□ -0.17
DNMT1-224ENST00000591764 SLC39A7Q92504 469 aa13.97□□□□□ -0.17
DNMT1-224ENST00000591764 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
DNMT1-224ENST00000591764 PCDHB13Q9Y5F0 798 aa13.96□□□□□ -0.17
DNMT1-224ENST00000591764 PRXQ9BXM0 1461 aa13.94□□□□□ -0.18
DNMT1-224ENST00000591764 C7P10643 843 aa13.94□□□□□ -0.18
DNMT1-224ENST00000591764 TIE1P35590 1138 aa13.94□□□□□ -0.18
DNMT1-224ENST00000591764 PHLDB1Q86UU1 1377 aa13.94□□□□□ -0.18
DNMT1-224ENST00000591764 ARAP3Q8WWN8 1544 aa13.93□□□□□ -0.18
DNMT1-224ENST00000591764 IFNL1Q8IU54 200 aa13.92□□□□□ -0.18
DNMT1-224ENST00000591764 KIF21BO75037 1637 aa13.92□□□□□ -0.18
DNMT1-224ENST00000591764 TTLL13PA6NNM8 815 aa13.91□□□□□ -0.18
DNMT1-224ENST00000591764 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
DNMT1-224ENST00000591764 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
DNMT1-224ENST00000591764 SGIP1Q9BQI5 828 aa13.91□□□□□ -0.18
DNMT1-224ENST00000591764 POTEFA5A3E0 1075 aa13.89□□□□□ -0.19
DNMT1-224ENST00000591764 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
DNMT1-224ENST00000591764 ABCA9Q8IUA7 1624 aa13.89□□□□□ -0.19
DNMT1-224ENST00000591764 ATP10BO94823 1461 aa13.87□□□□□ -0.19
DNMT1-224ENST00000591764 ARID3CA6NKF2 412 aa13.86□□□□□ -0.19
DNMT1-224ENST00000591764 PYGBP11216 843 aa13.86□□□□□ -0.19
DNMT1-224ENST00000591764 NEO1Q92859 1461 aa13.86□□□□□ -0.19
DNMT1-224ENST00000591764 RAPGEF6Q8TEU7 1601 aa13.86□□□□□ -0.19
DNMT1-224ENST00000591764 P3H3Q8IVL6 736 aa13.84□□□□□ -0.19
DNMT1-224ENST00000591764 SAMD9Q5K651 1589 aa13.83□□□□□ -0.19
DNMT1-224ENST00000591764 TRIM35Q9UPQ4 493 aa13.82□□□□□ -0.2
DNMT1-224ENST00000591764 PTPRMP28827 1452 aa13.81□□□□□ -0.2
DNMT1-224ENST00000591764 ADAMTSL3P82987 1691 aa13.81□□□□□ -0.2
DNMT1-224ENST00000591764 COLQQ9Y215 455 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-224ENST00000591764 ARID4BQ4LE39 1312 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-224ENST00000591764 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
DNMT1-224ENST00000591764 RAPGEF3O95398 923 aa13.79□□□□□ -0.2
DNMT1-224ENST00000591764 EEA1Q15075 1411 aa13.79□□□□□ -0.2
DNMT1-224ENST00000591764 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-224ENST00000591764 FBXO41Q8TF61 875 aa13.78□□□□□ -0.2
DNMT1-224ENST00000591764 BCORL1Q5H9F3 1711 aa13.78□□□□□ -0.2
DNMT1-224ENST00000591764 ARHGEF40Q8TER5 1519 aa13.77□□□□□ -0.21
DNMT1-224ENST00000591764 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
DNMT1-224ENST00000591764 PCDHB8Q9UN66 801 aa13.77□□□□□ -0.21
DNMT1-224ENST00000591764 NUP153P49790 1475 aaKnown RBP13.76□□□□□ -0.21
DNMT1-224ENST00000591764 PLEKHD1A6NEE1 506 aa13.76□□□□□ -0.21
DNMT1-224ENST00000591764 PCF11O94913 1555 aaKnown RBP13.75□□□□□ -0.21
DNMT1-224ENST00000591764 FRMPD1Q5SYB0 1578 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms