RNA–Protein interactions for RNA: ENST00000590602.5

TMC6-216, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMC6, Length 5,268 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-216ENST00000590602 IPO9Q96P70 1041 aaKnown RBP20.19■□□□□ 0.82
TMC6-216ENST00000590602 NEUROD2Q15784 382 aa20.18■□□□□ 0.82
TMC6-216ENST00000590602 ANKRD30AQ9BXX3 1397 aa20.17■□□□□ 0.82
TMC6-216ENST00000590602 KANK1Q14678 1352 aa20.15■□□□□ 0.82
TMC6-216ENST00000590602 L3MBTL2Q969R5 705 aa20.15■□□□□ 0.82
TMC6-216ENST00000590602 NUP155O75694 1391 aa20.15■□□□□ 0.82
TMC6-216ENST00000590602 TPRNQ4KMQ1 711 aa20.14■□□□□ 0.81
TMC6-216ENST00000590602 SPRYD3Q8NCJ5 442 aa20.14■□□□□ 0.81
TMC6-216ENST00000590602 FTSJ3Q8IY81 847 aaKnown RBP20.13■□□□□ 0.81
TMC6-216ENST00000590602 FRAT1Q92837 279 aaPredicted RBP20.13■□□□□ 0.81
TMC6-216ENST00000590602 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
TMC6-216ENST00000590602 CCDC18Q5T9S5 1454 aa20.13■□□□□ 0.81
TMC6-216ENST00000590602 KTN1Q86UP2 1357 aaKnown RBP20.12■□□□□ 0.81
TMC6-216ENST00000590602 MAPK8IP3Q9UPT6 1336 aa20.11■□□□□ 0.81
TMC6-216ENST00000590602 NUDCQ9Y266 331 aa20.11■□□□□ 0.81
TMC6-216ENST00000590602 ROCK2O75116 1388 aaKnown RBP20.11■□□□□ 0.81
TMC6-216ENST00000590602 HDGFP51858 240 aaKnown RBP20.11■□□□□ 0.81
TMC6-216ENST00000590602 L1TD1Q5T7N2 865 aaKnown RBP20.11■□□□□ 0.81
TMC6-216ENST00000590602 KIF21BO75037 1637 aa20.1■□□□□ 0.81
TMC6-216ENST00000590602 CASC1Q6TDU7 716 aa20.1■□□□□ 0.81
TMC6-216ENST00000590602 LMOD2Q6P5Q4 547 aa20.08■□□□□ 0.81
TMC6-216ENST00000590602 RALBP1Q15311 655 aa20.08■□□□□ 0.8
TMC6-216ENST00000590602 IGF1RP08069 1367 aa20.07■□□□□ 0.8
TMC6-216ENST00000590602 POGKQ9P215 609 aa20.07■□□□□ 0.8
TMC6-216ENST00000590602 TCERG1O14776 1098 aaKnown RBP20.05■□□□□ 0.8
TMC6-216ENST00000590602 GZF1Q9H116 711 aaPredicted RBP20.05■□□□□ 0.8
TMC6-216ENST00000590602 SLKQ9H2G2 1235 aaPredicted RBP20.05■□□□□ 0.8
TMC6-216ENST00000590602 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
TMC6-216ENST00000590602 CHMP4BQ9H444 224 aaKnown RBP20.04■□□□□ 0.8
TMC6-216ENST00000590602 HSP90AB1P08238 724 aaKnown RBP20.03■□□□□ 0.8
TMC6-216ENST00000590602 PNNQ9H307 717 aaKnown RBP20.03■□□□□ 0.8
TMC6-216ENST00000590602 PLCB2Q00722 1185 aa20.01■□□□□ 0.79
TMC6-216ENST00000590602 RCAN3Q9UKA8 241 aa20.01■□□□□ 0.79
TMC6-216ENST00000590602 FANCIQ9NVI1 1328 aa20■□□□□ 0.79
TMC6-216ENST00000590602 U2SURPO15042 1029 aaKnown RBP19.99■□□□□ 0.79
TMC6-216ENST00000590602 GOLGA2Q08379 1002 aa19.99■□□□□ 0.79
TMC6-216ENST00000590602 MS4A1P11836 297 aa19.99■□□□□ 0.79
TMC6-216ENST00000590602 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.792e-8■■■□□ 17
TMC6-216ENST00000590602 MORC1Q86VD1 984 aa19.98■□□□□ 0.79
TMC6-216ENST00000590602 EFCAB2Q5VUJ9 269 aa19.97■□□□□ 0.79
TMC6-216ENST00000590602 ARID3AQ99856 593 aa19.97■□□□□ 0.79
TMC6-216ENST00000590602 MSNP26038 577 aaKnown RBP19.97■□□□□ 0.79
TMC6-216ENST00000590602 HSCBQ8IWL3 235 aa19.96■□□□□ 0.79
TMC6-216ENST00000590602 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
TMC6-216ENST00000590602 NCAPD3P42695 1498 aa19.96■□□□□ 0.79
TMC6-216ENST00000590602 SYNJ1O43426 1573 aa19.96■□□□□ 0.79
TMC6-216ENST00000590602 TULP1O00294 542 aaPredicted RBP19.95■□□□□ 0.78
TMC6-216ENST00000590602 RSPH4AQ5TD94 716 aa19.95■□□□□ 0.78
TMC6-216ENST00000590602 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
TMC6-216ENST00000590602 VSIG10Q8N0Z9 540 aa19.93■□□□□ 0.78
TMC6-216ENST00000590602 LRRC9Q6ZRR7 1453 aa19.92■□□□□ 0.78
TMC6-216ENST00000590602 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
TMC6-216ENST00000590602 JPH4Q96JJ6 628 aa19.92■□□□□ 0.78
TMC6-216ENST00000590602 PHLDB1Q86UU1 1377 aa19.91■□□□□ 0.78
TMC6-216ENST00000590602 SRPK2P78362 688 aaKnown RBP19.91■□□□□ 0.78
TMC6-216ENST00000590602 FGD6Q6ZV73 1430 aa19.91■□□□□ 0.78
TMC6-216ENST00000590602 SLC4A3P48751 1232 aa19.91■□□□□ 0.78
TMC6-216ENST00000590602 GAPVD1Q14C86 1478 aa19.9■□□□□ 0.78
TMC6-216ENST00000590602 GGT6Q6P531 493 aa19.9■□□□□ 0.78
TMC6-216ENST00000590602 NLRP13Q86W25 1043 aa19.89■□□□□ 0.77
TMC6-216ENST00000590602 EIF3AQ14152 1382 aaKnown RBP19.88■□□□□ 0.77
TMC6-216ENST00000590602 FGD1P98174 961 aa19.88■□□□□ 0.77
TMC6-216ENST00000590602 USP35Q9P2H5 1018 aa19.88■□□□□ 0.77
TMC6-216ENST00000590602 CUX1P39880 1505 aa19.87■□□□□ 0.77
TMC6-216ENST00000590602 KIF15Q9NS87 1388 aa19.87■□□□□ 0.77
TMC6-216ENST00000590602 OS9Q13438 667 aaPredicted RBP19.87■□□□□ 0.77
TMC6-216ENST00000590602 SAFB2Q14151 953 aaKnown RBP eCLIP19.87■□□□□ 0.77
TMC6-216ENST00000590602 PRKRIP1Q9H875 184 aaPredicted RBP19.87■□□□□ 0.77
TMC6-216ENST00000590602 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
TMC6-216ENST00000590602 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
TMC6-216ENST00000590602 GSE1Q14687 1217 aa19.86■□□□□ 0.77
TMC6-216ENST00000590602 GOLGA6L3A6NEY3 463 aa19.86■□□□□ 0.77
TMC6-216ENST00000590602 RRBP1Q9P2E9 1410 aaKnown RBP19.84■□□□□ 0.77
TMC6-216ENST00000590602 NRDCO43847 1150 aa19.84■□□□□ 0.77
TMC6-216ENST00000590602 PDE4AP27815 886 aa19.84■□□□□ 0.77
TMC6-216ENST00000590602 ST20-MTHFSA0A0A6YYL1 179 aa19.83■□□□□ 0.77
TMC6-216ENST00000590602 PDE3BQ13370 1112 aa19.83■□□□□ 0.77
TMC6-216ENST00000590602 GOLGA6L6A8MZA4 724 aa19.83■□□□□ 0.76
TMC6-216ENST00000590602 UACAQ9BZF9 1416 aa19.83■□□□□ 0.76
TMC6-216ENST00000590602 MYBBP1AQ9BQG0 1328 aaKnown RBP19.83■□□□□ 0.76
TMC6-216ENST00000590602 CASKIN1Q8WXD9 1431 aa19.82■□□□□ 0.76
TMC6-216ENST00000590602 PRKCSHP14314 528 aaPredicted RBP19.82■□□□□ 0.76
TMC6-216ENST00000590602 CCDC144AA2RUR9 1427 aa19.82■□□□□ 0.76
TMC6-216ENST00000590602 KIF3BO15066 747 aa19.82■□□□□ 0.76
TMC6-216ENST00000590602 RSPH6AQ9H0K4 717 aa19.81■□□□□ 0.76
TMC6-216ENST00000590602 USP47Q96K76 1375 aa19.81■□□□□ 0.76
TMC6-216ENST00000590602 HSP90AA2PQ14568 343 aaPredicted RBP19.81■□□□□ 0.76
TMC6-216ENST00000590602 SPAG9O60271 1321 aaKnown RBP19.8■□□□□ 0.76
TMC6-216ENST00000590602 TMX4Q9H1E5 349 aaPredicted RBP19.8■□□□□ 0.76
TMC6-216ENST00000590602 STK26Q9P289 416 aa19.8■□□□□ 0.76
TMC6-216ENST00000590602 KCNJ4P48050 445 aa19.8■□□□□ 0.76
TMC6-216ENST00000590602 TOP2BQ02880 1626 aa19.79■□□□□ 0.76
TMC6-216ENST00000590602 CFTRP13569 1480 aa19.79■□□□□ 0.76
TMC6-216ENST00000590602 ZBED9Q6R2W3 1325 aa19.79■□□□□ 0.76
TMC6-216ENST00000590602 ANO8Q9HCE9 1232 aaPredicted RBP19.78■□□□□ 0.76
TMC6-216ENST00000590602 PRXQ9BXM0 1461 aa19.78■□□□□ 0.76
TMC6-216ENST00000590602 HDGFL2Q7Z4V5 671 aaPredicted RBP19.77■□□□□ 0.76
TMC6-216ENST00000590602 U2AF1L5P0DN76 240 aaPredicted RBP19.77■□□□□ 0.75
TMC6-216ENST00000590602 U2AF1Q01081 240 aaKnown RBP eCLIP19.77■□□□□ 0.75
TMC6-216ENST00000590602 GBP4Q96PP9 640 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 234.5 ms