RNA–Protein interactions for RNA: ENST00000590602.5

TMC6-216, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMC6, Length 5,268 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-216ENST00000590602 NISCHQ9Y2I1 1504 aa27.26■■□□□ 1.96
TMC6-216ENST00000590602 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.87
TMC6-216ENST00000590602 SUPT5HO00267 1087 aaKnown RBP25.9■■□□□ 1.74
TMC6-216ENST00000590602 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
TMC6-216ENST00000590602 PCGF6Q9BYE7 350 aa24.79■■□□□ 1.56
TMC6-216ENST00000590602 EHMT2Q96KQ7 1210 aa24.75■■□□□ 1.55
TMC6-216ENST00000590602 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
TMC6-216ENST00000590602 PELP1Q8IZL8 1130 aaKnown RBP24.53■■□□□ 1.52
TMC6-216ENST00000590602 APLP2Q06481 763 aa24.29■■□□□ 1.48
TMC6-216ENST00000590602 MYT1Q01538 1121 aa24.24■■□□□ 1.47
TMC6-216ENST00000590602 CENPBP07199 599 aaPredicted RBP24.12■■□□□ 1.45
TMC6-216ENST00000590602 TRIM41Q8WV44 630 aa24.05■■□□□ 1.44
TMC6-216ENST00000590602 TTBK1Q5TCY1 1321 aaPredicted RBP24.04■■□□□ 1.44
TMC6-216ENST00000590602 ZEB1P37275 1124 aaPredicted RBP24.01■■□□□ 1.43
TMC6-216ENST00000590602 HRCP23327 699 aa23.95■■□□□ 1.42
TMC6-216ENST00000590602 CCER1Q8TC90 406 aaPredicted RBP23.84■■□□□ 1.41
TMC6-216ENST00000590602 ERICH6Q7L0X2 663 aa23.75■■□□□ 1.39
TMC6-216ENST00000590602 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
TMC6-216ENST00000590602 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
TMC6-216ENST00000590602 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
TMC6-216ENST00000590602 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
TMC6-216ENST00000590602 UBTFP17480 764 aaKnown RBP23.53■■□□□ 1.36
TMC6-216ENST00000590602 TRIM26Q12899 539 aaPredicted RBP23.49■■□□□ 1.35
TMC6-216ENST00000590602 LOC105371045A0A1W2PR82 267 aa23.35■■□□□ 1.33
TMC6-216ENST00000590602 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
TMC6-216ENST00000590602 NEFLP07196 543 aa23.21■■□□□ 1.31
TMC6-216ENST00000590602 DIEXFQ68CQ4 756 aaKnown RBP22.9■■□□□ 1.26
TMC6-216ENST00000590602 GTF3C3Q9Y5Q9 886 aa22.88■■□□□ 1.25
TMC6-216ENST00000590602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.88■■□□□ 1.25
TMC6-216ENST00000590602 ABCC9O60706 1549 aa22.84■■□□□ 1.25
TMC6-216ENST00000590602 MYT1LQ9UL68 1186 aa22.82■■□□□ 1.24
TMC6-216ENST00000590602 HNRNPUL2Q1KMD3 747 aaKnown RBP22.74■■□□□ 1.23
TMC6-216ENST00000590602 ZCCHC6Q5VYS8 1495 aaKnown RBP22.71■■□□□ 1.23
TMC6-216ENST00000590602 ITGAEP38570 1179 aa22.68■■□□□ 1.22
TMC6-216ENST00000590602 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.24e-7■□□□□ 10.3
TMC6-216ENST00000590602 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
TMC6-216ENST00000590602 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
TMC6-216ENST00000590602 BCANQ96GW7 911 aa22.45■■□□□ 1.19
TMC6-216ENST00000590602 DAXXQ9UER7 740 aaPredicted RBP22.44■■□□□ 1.18
TMC6-216ENST00000590602 SCRIBQ14160 1630 aa22.36■■□□□ 1.17
TMC6-216ENST00000590602 CNGB1Q14028 1251 aaPredicted RBP22.29■■□□□ 1.16
TMC6-216ENST00000590602 RTL5Q5HYW3 569 aaPredicted RBP22.28■■□□□ 1.16
TMC6-216ENST00000590602 SCAF1Q9H7N4 1312 aaKnown RBP22.28■■□□□ 1.16
TMC6-216ENST00000590602 POLR3GLQ9BT43 218 aa22.26■■□□□ 1.15
TMC6-216ENST00000590602 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
TMC6-216ENST00000590602 ZNF316A6NFI3 1004 aaPredicted RBP22.22■■□□□ 1.15
TMC6-216ENST00000590602 FAM50AQ14320 339 aaKnown RBP22.22■■□□□ 1.15
TMC6-216ENST00000590602 CSRNP3Q8WYN3 585 aa22.2■■□□□ 1.14
TMC6-216ENST00000590602 NEUROD1Q13562 356 aa22.17■■□□□ 1.14
TMC6-216ENST00000590602 SLC4A1APQ9BWU0 796 aaKnown RBP22.15■■□□□ 1.14
TMC6-216ENST00000590602 CDK11AQ9UQ88 783 aaPredicted RBP22■■□□□ 1.11
TMC6-216ENST00000590602 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
TMC6-216ENST00000590602 TRIM52Q96A61 297 aa21.96■■□□□ 1.11
TMC6-216ENST00000590602 CLSPNQ9HAW4 1339 aa21.87■■□□□ 1.09
TMC6-216ENST00000590602 ANP32CO43423 234 aa21.86■■□□□ 1.09
TMC6-216ENST00000590602 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
TMC6-216ENST00000590602 EIF5BO60841 1220 aaKnown RBP21.82■■□□□ 1.08
TMC6-216ENST00000590602 P3H3Q8IVL6 736 aa21.8■■□□□ 1.08
TMC6-216ENST00000590602 FKBP8Q14318 412 aa21.8■■□□□ 1.08
TMC6-216ENST00000590602 ZBTB47Q9UFB7 747 aaPredicted RBP21.76■■□□□ 1.07
TMC6-216ENST00000590602 RB1CC1Q8TDY2 1594 aa21.68■■□□□ 1.06
TMC6-216ENST00000590602 MIER1Q8N108 512 aa21.64■■□□□ 1.06
TMC6-216ENST00000590602 ZNF326Q5BKZ1 582 aaKnown RBP21.63■■□□□ 1.05
TMC6-216ENST00000590602 NACADO15069 1562 aa21.62■■□□□ 1.05
TMC6-216ENST00000590602 NEFMP07197 916 aa21.6■■□□□ 1.05
TMC6-216ENST00000590602 ANP32AP39687 249 aaKnown RBP21.59■■□□□ 1.05
TMC6-216ENST00000590602 FBLN2P98095 1184 aa21.59■■□□□ 1.05
TMC6-216ENST00000590602 NPM2Q86SE8 214 aaKnown RBP21.56■■□□□ 1.04
TMC6-216ENST00000590602 ARID3CA6NKF2 412 aa21.55■■□□□ 1.04
TMC6-216ENST00000590602 EEA1Q15075 1411 aa21.54■■□□□ 1.04
TMC6-216ENST00000590602 CLIP1P30622 1438 aa21.54■■□□□ 1.04
TMC6-216ENST00000590602 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
TMC6-216ENST00000590602 SLC24A1O60721 1099 aa21.49■■□□□ 1.03
TMC6-216ENST00000590602 GOLGA3Q08378 1498 aa21.49■■□□□ 1.03
TMC6-216ENST00000590602 NBR1Q14596 966 aa21.49■■□□□ 1.03
TMC6-216ENST00000590602 ESF1Q9H501 851 aaKnown RBP21.47■■□□□ 1.03
TMC6-216ENST00000590602 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
TMC6-216ENST00000590602 TONSLQ96HA7 1378 aa21.45■■□□□ 1.02
TMC6-216ENST00000590602 ANP32EQ9BTT0 268 aa21.43■■□□□ 1.02
TMC6-216ENST00000590602 HNRNPUQ00839 825 aaKnown RBP eCLIP21.42■■□□□ 1.02
TMC6-216ENST00000590602 WRNQ14191 1432 aaPredicted RBP eCLIP21.41■■□□□ 1.02
TMC6-216ENST00000590602 ZNF777Q9ULD5 760 aaPredicted RBP21.39■■□□□ 1.02
TMC6-216ENST00000590602 TNIKQ9UKE5 1360 aa21.38■■□□□ 1.01
TMC6-216ENST00000590602 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
TMC6-216ENST00000590602 GLIPR1L2Q4G1C9 344 aa21.35■■□□□ 1.01
TMC6-216ENST00000590602 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
TMC6-216ENST00000590602 IRX6P78412 446 aaPredicted RBP21.32■■□□□ 1
TMC6-216ENST00000590602 CANXP27824 592 aaKnown RBP21.31■■□□□ 1
TMC6-216ENST00000590602 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
TMC6-216ENST00000590602 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
TMC6-216ENST00000590602 FAM9BQ8IZU0 186 aa21.26■□□□□ 0.99
TMC6-216ENST00000590602 MTUS2Q5JR59 1369 aa21.24■□□□□ 0.99
TMC6-216ENST00000590602 CHIC2Q9UKJ5 165 aa21.23■□□□□ 0.99
TMC6-216ENST00000590602 NPM1P06748 294 aaKnown RBP eCLIP21.21■□□□□ 0.99
TMC6-216ENST00000590602 BCL11AQ9H165 835 aa21.18■□□□□ 0.98
TMC6-216ENST00000590602 CCDC136Q96JN2 1154 aa21.17■□□□□ 0.98
TMC6-216ENST00000590602 HIRIP3Q9BW71 556 aaPredicted RBP21.16■□□□□ 0.98
TMC6-216ENST00000590602 STAG3Q9UJ98 1225 aa21.16■□□□□ 0.98
TMC6-216ENST00000590602 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
TMC6-216ENST00000590602 MROH2BQ7Z745 1585 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms