RNA–Protein interactions for RNA: ENST00000586869.5

NLE1-203, Transcript of notchless homolog 1, humanhuman

TSL 1 (best) BASIC

Gene NLE1, Length 5,286 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-203ENST00000586869 IGF1RP08069 1367 aa23.04■■□□□ 1.28
NLE1-203ENST00000586869 ZBED9Q6R2W3 1325 aa23.03■■□□□ 1.28
NLE1-203ENST00000586869 RRBP1Q9P2E9 1410 aaKnown RBP23.03■■□□□ 1.28
NLE1-203ENST00000586869 MS4A1P11836 297 aa23.01■■□□□ 1.27
NLE1-203ENST00000586869 PDE3BQ13370 1112 aa23.01■■□□□ 1.27
NLE1-203ENST00000586869 FANCIQ9NVI1 1328 aa23.01■■□□□ 1.27
NLE1-203ENST00000586869 ERICH3Q5RHP9 1530 aa23■■□□□ 1.27
NLE1-203ENST00000586869 NLRP13Q86W25 1043 aa22.99■■□□□ 1.27
NLE1-203ENST00000586869 MAPK8IP3Q9UPT6 1336 aa22.98■■□□□ 1.27
NLE1-203ENST00000586869 PHLDB1Q86UU1 1377 aa22.98■■□□□ 1.27
NLE1-203ENST00000586869 TRHP20396 242 aaPredicted RBP22.98■■□□□ 1.27
NLE1-203ENST00000586869 LRRC9Q6ZRR7 1453 aa22.97■■□□□ 1.27
NLE1-203ENST00000586869 CARMIL2Q6F5E8 1435 aa22.97■■□□□ 1.27
NLE1-203ENST00000586869 SYNJ1O43426 1573 aa22.95■■□□□ 1.27
NLE1-203ENST00000586869 ARAP1Q96P48 1450 aa22.95■■□□□ 1.26
NLE1-203ENST00000586869 TNNT2P45379 298 aaPredicted RBP22.94■■□□□ 1.26
NLE1-203ENST00000586869 FGD6Q6ZV73 1430 aa22.94■■□□□ 1.26
NLE1-203ENST00000586869 KIF15Q9NS87 1388 aa22.94■■□□□ 1.26
NLE1-203ENST00000586869 UACAQ9BZF9 1416 aa22.93■■□□□ 1.26
NLE1-203ENST00000586869 CHMP4BQ9H444 224 aaKnown RBP22.9■■□□□ 1.26
NLE1-203ENST00000586869 MYBBP1AQ9BQG0 1328 aaKnown RBP22.9■■□□□ 1.26
NLE1-203ENST00000586869 KANK1Q14678 1352 aa22.89■■□□□ 1.26
NLE1-203ENST00000586869 FANCD2Q9BXW9 1451 aa22.88■■□□□ 1.25
NLE1-203ENST00000586869 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
NLE1-203ENST00000586869 MORC1Q86VD1 984 aa22.86■■□□□ 1.25
NLE1-203ENST00000586869 NCLP19338 710 aaKnown RBP22.86■■□□□ 1.25
NLE1-203ENST00000586869 CASC1Q6TDU7 716 aa22.85■■□□□ 1.25
NLE1-203ENST00000586869 MYOM3Q5VTT5 1437 aa22.85■■□□□ 1.25
NLE1-203ENST00000586869 L1TD1Q5T7N2 865 aaKnown RBP22.85■■□□□ 1.25
NLE1-203ENST00000586869 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
NLE1-203ENST00000586869 ST20-MTHFSA0A0A6YYL1 179 aa22.83■■□□□ 1.25
NLE1-203ENST00000586869 U2SURPO15042 1029 aaKnown RBP22.83■■□□□ 1.25
NLE1-203ENST00000586869 USP47Q96K76 1375 aa22.83■■□□□ 1.25
NLE1-203ENST00000586869 CUX1P39880 1505 aa22.83■■□□□ 1.25
NLE1-203ENST00000586869 PNNQ9H307 717 aaKnown RBP22.83■■□□□ 1.25
NLE1-203ENST00000586869 GOLGA2Q08379 1002 aa22.82■■□□□ 1.24
NLE1-203ENST00000586869 CCDC7Q96M83 1385 aa22.82■■□□□ 1.24
NLE1-203ENST00000586869 HSP90AB1P08238 724 aaKnown RBP22.81■■□□□ 1.24
NLE1-203ENST00000586869 HSCBQ8IWL3 235 aa22.81■■□□□ 1.24
NLE1-203ENST00000586869 CNTLNQ9NXG0 1405 aa22.81■■□□□ 1.24
NLE1-203ENST00000586869 RSPH4AQ5TD94 716 aa22.8■■□□□ 1.24
NLE1-203ENST00000586869 CASKIN1Q8WXD9 1431 aa22.8■■□□□ 1.24
NLE1-203ENST00000586869 RRP1P56182 461 aaKnown RBP22.79■■□□□ 1.24
NLE1-203ENST00000586869 NAP1L5Q96NT1 182 aaPredicted RBP22.78■■□□□ 1.24
NLE1-203ENST00000586869 POGKQ9P215 609 aa22.78■■□□□ 1.24
NLE1-203ENST00000586869 USP35Q9P2H5 1018 aa22.78■■□□□ 1.24
NLE1-203ENST00000586869 NCAPD3P42695 1498 aa22.78■■□□□ 1.24
NLE1-203ENST00000586869 PDE4AP27815 886 aa22.76■■□□□ 1.23
NLE1-203ENST00000586869 HNRNPMP52272 730 aaKnown RBP eCLIP22.76■■□□□ 1.23
NLE1-203ENST00000586869 C14orf37Q86TY3 774 aa22.75■■□□□ 1.23
NLE1-203ENST00000586869 PLEKHG5O94827 1062 aa22.75■■□□□ 1.23
NLE1-203ENST00000586869 MLECQ14165 292 aa22.75■■□□□ 1.23
NLE1-203ENST00000586869 WASHC2AQ641Q2 1341 aa22.75■■□□□ 1.23
NLE1-203ENST00000586869 KIF7Q2M1P5 1343 aa22.74■■□□□ 1.23
NLE1-203ENST00000586869 TOP2BQ02880 1626 aa22.74■■□□□ 1.23
NLE1-203ENST00000586869 EXOC6Q8TAG9 804 aa22.74■■□□□ 1.23
NLE1-203ENST00000586869 RWDD1Q9H446 243 aaPredicted RBP22.74■■□□□ 1.23
NLE1-203ENST00000586869 EIF3AQ14152 1382 aaKnown RBP22.73■■□□□ 1.23
NLE1-203ENST00000586869 FYCO1Q9BQS8 1478 aa22.72■■□□□ 1.23
NLE1-203ENST00000586869 EFCAB2Q5VUJ9 269 aa22.71■■□□□ 1.23
NLE1-203ENST00000586869 PMFBP1Q8TBY8 1022 aa22.71■■□□□ 1.23
NLE1-203ENST00000586869 NCOA2Q15596 1464 aa22.7■■□□□ 1.22
NLE1-203ENST00000586869 PTMAP06454 111 aaKnown RBP22.69■■□□□ 1.22
NLE1-203ENST00000586869 JPH4Q96JJ6 628 aa22.69■■□□□ 1.22
NLE1-203ENST00000586869 CCDC144AA2RUR9 1427 aa22.69■■□□□ 1.22
NLE1-203ENST00000586869 CENPQQ7L2Z9 268 aaPredicted RBP22.69■■□□□ 1.22
NLE1-203ENST00000586869 RAD54L2Q9Y4B4 1467 aa22.69■■□□□ 1.22
NLE1-203ENST00000586869 PANK3Q9H999 370 aa22.69■■□□□ 1.22
NLE1-203ENST00000586869 IPO8O15397 1037 aaKnown RBP22.67■■□□□ 1.22
NLE1-203ENST00000586869 SLKQ9H2G2 1235 aaPredicted RBP22.67■■□□□ 1.22
NLE1-203ENST00000586869 SPRYD3Q8NCJ5 442 aa22.67■■□□□ 1.22
NLE1-203ENST00000586869 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
NLE1-203ENST00000586869 SRPK2P78362 688 aaKnown RBP22.65■■□□□ 1.22
NLE1-203ENST00000586869 U2AF1L5P0DN76 240 aaPredicted RBP22.65■■□□□ 1.22
NLE1-203ENST00000586869 U2AF1Q01081 240 aaKnown RBP eCLIP22.65■■□□□ 1.22
NLE1-203ENST00000586869 TIAM1Q13009 1591 aa22.64■■□□□ 1.22
NLE1-203ENST00000586869 CENPJQ9HC77 1338 aaPredicted RBP22.64■■□□□ 1.22
NLE1-203ENST00000586869 CFTRP13569 1480 aa22.64■■□□□ 1.21
NLE1-203ENST00000586869 CCDC146Q8IYE0 955 aa22.64■■□□□ 1.21
NLE1-203ENST00000586869 CFAP44Q96MT7 982 aa22.63■■□□□ 1.21
NLE1-203ENST00000586869 PLIN1O60240 522 aa22.63■■□□□ 1.21
NLE1-203ENST00000586869 FAM161AQ3B820 660 aa22.63■■□□□ 1.21
NLE1-203ENST00000586869 ZBTB7CA1YPR0 619 aa22.62■■□□□ 1.21
NLE1-203ENST00000586869 CRBNQ96SW2 442 aa22.62■■□□□ 1.21
NLE1-203ENST00000586869 GGT6Q6P531 493 aa22.61■■□□□ 1.21
NLE1-203ENST00000586869 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
NLE1-203ENST00000586869 HFM1A2PYH4 1435 aa22.59■■□□□ 1.21
NLE1-203ENST00000586869 ITPRIPQ8IWB1 547 aa22.58■■□□□ 1.21
NLE1-203ENST00000586869 EFCAB5A4FU69 1503 aa22.58■■□□□ 1.21
NLE1-203ENST00000586869 GBP4Q96PP9 640 aa22.58■■□□□ 1.2
NLE1-203ENST00000586869 DNTTIP2Q5QJE6 756 aaKnown RBP22.57■■□□□ 1.2
NLE1-203ENST00000586869 PTMSP20962 102 aa22.57■■□□□ 1.2
NLE1-203ENST00000586869 HAP1P54257 671 aaPredicted RBP22.57■■□□□ 1.2
NLE1-203ENST00000586869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.56■■□□□ 1.2
NLE1-203ENST00000586869 SAFB2Q14151 953 aaKnown RBP eCLIP22.56■■□□□ 1.2
NLE1-203ENST00000586869 ZNF644Q9H582 1327 aaPredicted RBP22.55■■□□□ 1.2
NLE1-203ENST00000586869 MIA2Q96PC5 1412 aa22.54■■□□□ 1.2
NLE1-203ENST00000586869 E9PSI1 815 aa22.53■■□□□ 1.2
NLE1-203ENST00000586869 GSE1Q14687 1217 aa22.53■■□□□ 1.2
NLE1-203ENST00000586869 HDGFL2Q7Z4V5 671 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms