RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 CERKQ8TCT0 537 aa14.01□□□□□ -0.17
SUPT4H1-206ENST00000581204 WDR7Q9Y4E6 1490 aa14□□□□□ -0.17
SUPT4H1-206ENST00000581204 DISP1Q96F81 1524 aa14□□□□□ -0.17
SUPT4H1-206ENST00000581204 CARMIL2Q6F5E8 1435 aa13.99□□□□□ -0.17
SUPT4H1-206ENST00000581204 IGF1RP08069 1367 aa13.98□□□□□ -0.17
SUPT4H1-206ENST00000581204 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
SUPT4H1-206ENST00000581204 MADDQ8WXG6 1647 aa13.98□□□□□ -0.17
SUPT4H1-206ENST00000581204 BCORL1Q5H9F3 1711 aa13.98□□□□□ -0.17
SUPT4H1-206ENST00000581204 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
SUPT4H1-206ENST00000581204 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
SUPT4H1-206ENST00000581204 CD109Q6YHK3 1445 aa13.96□□□□□ -0.18
SUPT4H1-206ENST00000581204 ARAP3Q8WWN8 1544 aa13.95□□□□□ -0.18
SUPT4H1-206ENST00000581204 CACNB1Q02641 598 aaPredicted RBP13.95□□□□□ -0.18
SUPT4H1-206ENST00000581204 IQGAP2Q13576 1575 aa13.95□□□□□ -0.18
SUPT4H1-206ENST00000581204 IFNLR1Q8IU57 520 aaPredicted RBP13.92□□□□□ -0.18
SUPT4H1-206ENST00000581204 HSPA2P54652 639 aa13.91□□□□□ -0.18
SUPT4H1-206ENST00000581204 RIMS1Q86UR5 1692 aaKnown RBP13.89□□□□□ -0.19
SUPT4H1-206ENST00000581204 FRMPD1Q5SYB0 1578 aa13.88□□□□□ -0.19
SUPT4H1-206ENST00000581204 KIAA0556O60303 1618 aa13.87□□□□□ -0.19
SUPT4H1-206ENST00000581204 UGGT2Q9NYU1 1516 aa13.87□□□□□ -0.19
SUPT4H1-206ENST00000581204 KIF27Q86VH2 1401 aa13.84□□□□□ -0.19
SUPT4H1-206ENST00000581204 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.19
SUPT4H1-206ENST00000581204 ABCA8O94911 1581 aa13.81□□□□□ -0.2
SUPT4H1-206ENST00000581204 ARHGEF40Q8TER5 1519 aa13.8□□□□□ -0.2
SUPT4H1-206ENST00000581204 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
SUPT4H1-206ENST00000581204 SIGLEC1Q9BZZ2 1709 aa13.78□□□□□ -0.2
SUPT4H1-206ENST00000581204 RAPGEF3O95398 923 aa13.78□□□□□ -0.2
SUPT4H1-206ENST00000581204 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
SUPT4H1-206ENST00000581204 KCNH8Q96L42 1107 aa13.78□□□□□ -0.2
SUPT4H1-206ENST00000581204 STRCQ7RTU9 1775 aa13.77□□□□□ -0.21
SUPT4H1-206ENST00000581204 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.21
SUPT4H1-206ENST00000581204 ABCA9Q8IUA7 1624 aa13.76□□□□□ -0.21
SUPT4H1-206ENST00000581204 PHLDB1Q86UU1 1377 aa13.76□□□□□ -0.21
SUPT4H1-206ENST00000581204 PLCD3Q8N3E9 789 aa13.76□□□□□ -0.21
SUPT4H1-206ENST00000581204 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
SUPT4H1-206ENST00000581204 TTC37Q6PGP7 1564 aa13.74□□□□□ -0.21
SUPT4H1-206ENST00000581204 NEO1Q92859 1461 aa13.74□□□□□ -0.21
SUPT4H1-206ENST00000581204 ARID4BQ4LE39 1312 aaPredicted RBP13.73□□□□□ -0.21
SUPT4H1-206ENST00000581204 YEATS2Q9ULM3 1422 aa13.72□□□□□ -0.21
SUPT4H1-206ENST00000581204 LTBP4Q8N2S1 1624 aa13.72□□□□□ -0.21
SUPT4H1-206ENST00000581204 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
SUPT4H1-206ENST00000581204 PREX1Q8TCU6 1659 aa13.71□□□□□ -0.21
SUPT4H1-206ENST00000581204 RICTORQ6R327 1708 aa13.7□□□□□ -0.22
SUPT4H1-206ENST00000581204 MIER1Q8N108 512 aa13.69□□□□□ -0.22
SUPT4H1-206ENST00000581204 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
SUPT4H1-206ENST00000581204 IQSEC2Q5JU85 1478 aa13.67□□□□□ -0.22
SUPT4H1-206ENST00000581204 EEA1Q15075 1411 aa13.67□□□□□ -0.22
SUPT4H1-206ENST00000581204 PKD2Q13563 968 aa13.67□□□□□ -0.22
SUPT4H1-206ENST00000581204 FANCAO15360 1455 aa13.67□□□□□ -0.22
SUPT4H1-206ENST00000581204 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
SUPT4H1-206ENST00000581204 ATP10BO94823 1461 aa13.65□□□□□ -0.22
SUPT4H1-206ENST00000581204 ZMYM4Q5VZL5 1548 aa13.64□□□□□ -0.23
SUPT4H1-206ENST00000581204 PTPRTO14522 1441 aa13.64□□□□□ -0.23
SUPT4H1-206ENST00000581204 FHOD3Q2V2M9 1422 aa13.64□□□□□ -0.23
SUPT4H1-206ENST00000581204 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
SUPT4H1-206ENST00000581204 ARHGEF12Q9NZN5 1544 aa13.63□□□□□ -0.23
SUPT4H1-206ENST00000581204 POGZQ7Z3K3 1410 aa13.63□□□□□ -0.23
SUPT4H1-206ENST00000581204 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
SUPT4H1-206ENST00000581204 AKNAQ7Z591 1439 aa13.61□□□□□ -0.23
SUPT4H1-206ENST00000581204 DENND4BO75064 1496 aaPredicted RBP13.61□□□□□ -0.23
SUPT4H1-206ENST00000581204 ZFYVE16Q7Z3T8 1539 aa13.6□□□□□ -0.23
SUPT4H1-206ENST00000581204 CTTNBP2Q8WZ74 1663 aa13.6□□□□□ -0.23
SUPT4H1-206ENST00000581204 GOLGA3Q08378 1498 aa13.6□□□□□ -0.23
SUPT4H1-206ENST00000581204 MED1Q15648 1581 aaPredicted RBP13.59□□□□□ -0.23
SUPT4H1-206ENST00000581204 EFCAB5A4FU69 1503 aa13.59□□□□□ -0.23
SUPT4H1-206ENST00000581204 ARID3CA6NKF2 412 aa13.56□□□□□ -0.24
SUPT4H1-206ENST00000581204 ECM2O94769 699 aaPredicted RBP13.55□□□□□ -0.24
SUPT4H1-206ENST00000581204 PLCB2Q00722 1185 aa13.55□□□□□ -0.24
SUPT4H1-206ENST00000581204 UHRF1BP1Q6BDS2 1440 aa13.55□□□□□ -0.24
SUPT4H1-206ENST00000581204 CEBPAP49715 358 aaPredicted RBP13.54□□□□□ -0.24
SUPT4H1-206ENST00000581204 MLECQ14165 292 aa13.54□□□□□ -0.24
SUPT4H1-206ENST00000581204 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
SUPT4H1-206ENST00000581204 MAGI2Q86UL8 1455 aa13.54□□□□□ -0.24
SUPT4H1-206ENST00000581204 HECW1Q76N89 1606 aa13.53□□□□□ -0.24
SUPT4H1-206ENST00000581204 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
SUPT4H1-206ENST00000581204 CFAP74Q9C0B2 1584 aa13.52□□□□□ -0.25
SUPT4H1-206ENST00000581204 NCOA1Q15788 1441 aa13.5□□□□□ -0.25
SUPT4H1-206ENST00000581204 UBTFP17480 764 aaKnown RBP13.48□□□□□ -0.25
SUPT4H1-206ENST00000581204 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
SUPT4H1-206ENST00000581204 C3P01024 1663 aa13.47□□□□□ -0.25
SUPT4H1-206ENST00000581204 RAPGEF6Q8TEU7 1601 aa13.46□□□□□ -0.25
SUPT4H1-206ENST00000581204 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.46□□□□□ -0.256e-6■■□□□ 13.3
SUPT4H1-206ENST00000581204 ATP10AO60312 1499 aa13.46□□□□□ -0.25
SUPT4H1-206ENST00000581204 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
SUPT4H1-206ENST00000581204 NUP153P49790 1475 aaKnown RBP13.45□□□□□ -0.26
SUPT4H1-206ENST00000581204 UBAP1LF5GYI3 381 aa13.45□□□□□ -0.26
SUPT4H1-206ENST00000581204 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
SUPT4H1-206ENST00000581204 ZNF335Q9H4Z2 1342 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-206ENST00000581204 SAMD9Q5K651 1589 aa13.41□□□□□ -0.26
SUPT4H1-206ENST00000581204 HSPA1LP34931 641 aa13.41□□□□□ -0.26
SUPT4H1-206ENST00000581204 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.41□□□□□ -0.26
SUPT4H1-206ENST00000581204 CIZ1Q9ULV3 898 aaPredicted RBP13.41□□□□□ -0.26
SUPT4H1-206ENST00000581204 CAMSAP1Q5T5Y3 1602 aa13.4□□□□□ -0.26
SUPT4H1-206ENST00000581204 SCAPERQ9BY12 1400 aa13.39□□□□□ -0.27
SUPT4H1-206ENST00000581204 GSE1Q14687 1217 aa13.38□□□□□ -0.27
SUPT4H1-206ENST00000581204 BBXQ8WY36 941 aaPredicted RBP13.38□□□□□ -0.27
SUPT4H1-206ENST00000581204 TRAPPC8Q9Y2L5 1435 aa13.38□□□□□ -0.27
SUPT4H1-206ENST00000581204 REREQ9P2R6 1566 aa13.37□□□□□ -0.27
SUPT4H1-206ENST00000581204 PRR29P0C7W0 189 aa13.36□□□□□ -0.27
SUPT4H1-206ENST00000581204 P3H3Q8IVL6 736 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms