RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 ARAP1Q96P48 1450 aa14.09□□□□□ -0.15
RNF43-203ENST00000577716 GOLGA6L22H0YM25 854 aa14.08□□□□□ -0.15
RNF43-203ENST00000577716 PRKRIP1Q9H875 184 aaPredicted RBP14.08□□□□□ -0.15
RNF43-203ENST00000577716 CFTRP13569 1480 aa14.08□□□□□ -0.16
RNF43-203ENST00000577716 ROCK2O75116 1388 aaKnown RBP14.07□□□□□ -0.16
RNF43-203ENST00000577716 TCERG1O14776 1098 aaKnown RBP14.07□□□□□ -0.16
RNF43-203ENST00000577716 ANKRD30AQ9BXX3 1397 aa14.07□□□□□ -0.16
RNF43-203ENST00000577716 U2SURPO15042 1029 aaKnown RBP14.07□□□□□ -0.16
RNF43-203ENST00000577716 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
RNF43-203ENST00000577716 PRXQ9BXM0 1461 aa14.05□□□□□ -0.16
RNF43-203ENST00000577716 NLRP13Q86W25 1043 aa14.05□□□□□ -0.16
RNF43-203ENST00000577716 PHLDB1Q86UU1 1377 aa14.04□□□□□ -0.16
RNF43-203ENST00000577716 NCLP19338 710 aaKnown RBP14.04□□□□□ -0.16
RNF43-203ENST00000577716 POGKQ9P215 609 aa14.03□□□□□ -0.16
RNF43-203ENST00000577716 CCDC18Q5T9S5 1454 aa14.03□□□□□ -0.16
RNF43-203ENST00000577716 IPO9Q96P70 1041 aaKnown RBP14.03□□□□□ -0.16
RNF43-203ENST00000577716 MS4A1P11836 297 aa14.02□□□□□ -0.16
RNF43-203ENST00000577716 MORC1Q86VD1 984 aa14.02□□□□□ -0.16
RNF43-203ENST00000577716 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.17
RNF43-203ENST00000577716 TOP2BQ02880 1626 aa14.02□□□□□ -0.17
RNF43-203ENST00000577716 CARMIL2Q6F5E8 1435 aa14.02□□□□□ -0.17
RNF43-203ENST00000577716 CUX1P39880 1505 aa14.01□□□□□ -0.17
RNF43-203ENST00000577716 ST20-MTHFSA0A0A6YYL1 179 aa14.01□□□□□ -0.17
RNF43-203ENST00000577716 ZBED9Q6R2W3 1325 aa14□□□□□ -0.17
RNF43-203ENST00000577716 GAPVD1Q14C86 1478 aa14□□□□□ -0.17
RNF43-203ENST00000577716 PDE3BQ13370 1112 aa13.99□□□□□ -0.17
RNF43-203ENST00000577716 HNRNPMP52272 730 aaKnown RBP eCLIP13.99□□□□□ -0.172e-6■■■□□ 19.1
RNF43-203ENST00000577716 JPH4Q96JJ6 628 aa13.98□□□□□ -0.17
RNF43-203ENST00000577716 KANK1Q14678 1352 aa13.98□□□□□ -0.17
RNF43-203ENST00000577716 LRRC9Q6ZRR7 1453 aa13.98□□□□□ -0.17
RNF43-203ENST00000577716 SAFB2Q14151 953 aaKnown RBP eCLIP13.97□□□□□ -0.17
RNF43-203ENST00000577716 C14orf37Q86TY3 774 aa13.97□□□□□ -0.17
RNF43-203ENST00000577716 PLEKHG5O94827 1062 aa13.96□□□□□ -0.17
RNF43-203ENST00000577716 HSP90AB1P08238 724 aaKnown RBP13.96□□□□□ -0.17
RNF43-203ENST00000577716 GOLGA2Q08379 1002 aa13.96□□□□□ -0.18
RNF43-203ENST00000577716 CASC1Q6TDU7 716 aa13.95□□□□□ -0.18
RNF43-203ENST00000577716 CHMP4BQ9H444 224 aaKnown RBP13.95□□□□□ -0.18
RNF43-203ENST00000577716 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
RNF43-203ENST00000577716 SRPK2P78362 688 aaKnown RBP13.95□□□□□ -0.18
RNF43-203ENST00000577716 SPRYD3Q8NCJ5 442 aa13.95□□□□□ -0.18
RNF43-203ENST00000577716 NESP48681 1621 aa13.95□□□□□ -0.18
RNF43-203ENST00000577716 KIF15Q9NS87 1388 aa13.95□□□□□ -0.18
RNF43-203ENST00000577716 MYBBP1AQ9BQG0 1328 aaKnown RBP13.95□□□□□ -0.18
RNF43-203ENST00000577716 RRBP1Q9P2E9 1410 aaKnown RBP13.94□□□□□ -0.18
RNF43-203ENST00000577716 FGD6Q6ZV73 1430 aa13.94□□□□□ -0.18
RNF43-203ENST00000577716 ZBTB7CA1YPR0 619 aa13.94□□□□□ -0.18
RNF43-203ENST00000577716 EFCAB2Q5VUJ9 269 aa13.93□□□□□ -0.18
RNF43-203ENST00000577716 HSCBQ8IWL3 235 aa13.93□□□□□ -0.18
RNF43-203ENST00000577716 SLKQ9H2G2 1235 aaPredicted RBP13.93□□□□□ -0.18
RNF43-203ENST00000577716 NAP1L5Q96NT1 182 aaPredicted RBP13.93□□□□□ -0.18
RNF43-203ENST00000577716 USP47Q96K76 1375 aa13.93□□□□□ -0.18
RNF43-203ENST00000577716 GGT6Q6P531 493 aa13.93□□□□□ -0.18
RNF43-203ENST00000577716 U2AF1L5P0DN76 240 aaPredicted RBP13.92□□□□□ -0.18
RNF43-203ENST00000577716 U2AF1Q01081 240 aaKnown RBP eCLIP13.92□□□□□ -0.184e-11■□□□□ 10.3
RNF43-203ENST00000577716 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
RNF43-203ENST00000577716 FANCIQ9NVI1 1328 aa13.92□□□□□ -0.18
RNF43-203ENST00000577716 EXOC6Q8TAG9 804 aa13.92□□□□□ -0.18
RNF43-203ENST00000577716 UACAQ9BZF9 1416 aa13.91□□□□□ -0.18
RNF43-203ENST00000577716 PTMAP06454 111 aaKnown RBP13.91□□□□□ -0.18
RNF43-203ENST00000577716 CCDC146Q8IYE0 955 aa13.91□□□□□ -0.18
RNF43-203ENST00000577716 AQRO60306 1485 aaKnown RBP eCLIP13.9□□□□□ -0.189e-8■■■■□ 23.6
RNF43-203ENST00000577716 PLIN1O60240 522 aa13.9□□□□□ -0.18
RNF43-203ENST00000577716 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
RNF43-203ENST00000577716 PANK3Q9H999 370 aa13.9□□□□□ -0.18
RNF43-203ENST00000577716 RSPH4AQ5TD94 716 aa13.9□□□□□ -0.19
RNF43-203ENST00000577716 CASKIN1Q8WXD9 1431 aa13.89□□□□□ -0.19
RNF43-203ENST00000577716 ZNF644Q9H582 1327 aaPredicted RBP13.89□□□□□ -0.19
RNF43-203ENST00000577716 PDE4AP27815 886 aa13.89□□□□□ -0.19
RNF43-203ENST00000577716 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
RNF43-203ENST00000577716 CCDC7Q96M83 1385 aa13.89□□□□□ -0.19
RNF43-203ENST00000577716 RWDD1Q9H446 243 aaPredicted RBP13.89□□□□□ -0.19
RNF43-203ENST00000577716 STK26Q9P289 416 aa13.89□□□□□ -0.19
RNF43-203ENST00000577716 MYOM3Q5VTT5 1437 aa13.88□□□□□ -0.19
RNF43-203ENST00000577716 L1TD1Q5T7N2 865 aaKnown RBP13.88□□□□□ -0.19
RNF43-203ENST00000577716 CLUAP1Q96AJ1 413 aa13.88□□□□□ -0.19
RNF43-203ENST00000577716 KIF7Q2M1P5 1343 aa13.88□□□□□ -0.19
RNF43-203ENST00000577716 WASHC2AQ641Q2 1341 aa13.88□□□□□ -0.19
RNF43-203ENST00000577716 KIF3BO15066 747 aa13.87□□□□□ -0.19
RNF43-203ENST00000577716 IPO8O15397 1037 aaKnown RBP13.86□□□□□ -0.19
RNF43-203ENST00000577716 PEG3Q9GZU2 1588 aa13.86□□□□□ -0.19
RNF43-203ENST00000577716 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
RNF43-203ENST00000577716 CCDC144AA2RUR9 1427 aa13.85□□□□□ -0.19
RNF43-203ENST00000577716 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
RNF43-203ENST00000577716 DNTTIP2Q5QJE6 756 aaKnown RBP13.85□□□□□ -0.19
RNF43-203ENST00000577716 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
RNF43-203ENST00000577716 ITPRIPQ8IWB1 547 aa13.85□□□□□ -0.19
RNF43-203ENST00000577716 CC2D2AQ9P2K1 1620 aa13.84□□□□□ -0.19
RNF43-203ENST00000577716 CENPJQ9HC77 1338 aaPredicted RBP13.84□□□□□ -0.19
RNF43-203ENST00000577716 NCOA2Q15596 1464 aa13.84□□□□□ -0.19
RNF43-203ENST00000577716 PMFBP1Q8TBY8 1022 aa13.84□□□□□ -0.19
RNF43-203ENST00000577716 ARID4BQ4LE39 1312 aaPredicted RBP13.84□□□□□ -0.19
RNF43-203ENST00000577716 GZF1Q9H116 711 aaPredicted RBP13.84□□□□□ -0.19
RNF43-203ENST00000577716 CRBNQ96SW2 442 aa13.83□□□□□ -0.2
RNF43-203ENST00000577716 CNTLNQ9NXG0 1405 aa13.83□□□□□ -0.2
RNF43-203ENST00000577716 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.2
RNF43-203ENST00000577716 SOX12O15370 315 aa13.83□□□□□ -0.2
RNF43-203ENST00000577716 FYCO1Q9BQS8 1478 aa13.82□□□□□ -0.2
RNF43-203ENST00000577716 SPAG9O60271 1321 aaKnown RBP13.82□□□□□ -0.2
RNF43-203ENST00000577716 SLC4A3P48751 1232 aa13.82□□□□□ -0.2
RNF43-203ENST00000577716 SMC4Q9NTJ3 1288 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms