RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 KDM6BO15054 1643 aa8.98□□□□□ -0.97
IDH3A-206ENST00000558535 TIMELESSQ9UNS1 1208 aa8.98□□□□□ -0.97
IDH3A-206ENST00000558535 EPRSP07814 1512 aaKnown RBP8.97□□□□□ -0.97
IDH3A-206ENST00000558535 BRD2P25440 801 aaKnown RBP8.97□□□□□ -0.97
IDH3A-206ENST00000558535 ABCA8O94911 1581 aa8.96□□□□□ -0.97
IDH3A-206ENST00000558535 WDR7Q9Y4E6 1490 aa8.96□□□□□ -0.97
IDH3A-206ENST00000558535 USP35Q9P2H5 1018 aa8.96□□□□□ -0.97
IDH3A-206ENST00000558535 RSPH4AQ5TD94 716 aa8.96□□□□□ -0.98
IDH3A-206ENST00000558535 MSH5O43196 834 aa8.95□□□□□ -0.98
IDH3A-206ENST00000558535 ZCCHC11Q5TAX3 1644 aaKnown RBP8.95□□□□□ -0.98
IDH3A-206ENST00000558535 MAP3K4Q9Y6R4 1608 aa8.94□□□□□ -0.98
IDH3A-206ENST00000558535 PHLDB1Q86UU1 1377 aa8.93□□□□□ -0.98
IDH3A-206ENST00000558535 MAGI3Q5TCQ9 1506 aa8.93□□□□□ -0.98
IDH3A-206ENST00000558535 RTL5Q5HYW3 569 aaPredicted RBP8.93□□□□□ -0.98
IDH3A-206ENST00000558535 FBXO3Q9UK99 471 aa8.93□□□□□ -0.98
IDH3A-206ENST00000558535 RRP9O43818 475 aaKnown RBP8.92□□□□□ -0.98
IDH3A-206ENST00000558535 SAMD9Q5K651 1589 aa8.92□□□□□ -0.98
IDH3A-206ENST00000558535 RBM10P98175 930 aaKnown RBP8.92□□□□□ -0.98
IDH3A-206ENST00000558535 CFAP43Q8NDM7 1665 aa8.91□□□□□ -0.98
IDH3A-206ENST00000558535 PPRC1Q5VV67 1664 aaKnown RBP8.91□□□□□ -0.98
IDH3A-206ENST00000558535 EFCAB5A4FU69 1503 aa8.9□□□□□ -0.98
IDH3A-206ENST00000558535 KIF21BO75037 1637 aa8.9□□□□□ -0.98
IDH3A-206ENST00000558535 NCLP19338 710 aaKnown RBP8.89□□□□□ -0.99
IDH3A-206ENST00000558535 VSIG10Q8N0Z9 540 aa8.89□□□□□ -0.99
IDH3A-206ENST00000558535 CD109Q6YHK3 1445 aa8.88□□□□□ -0.99
IDH3A-206ENST00000558535 BCL11BQ9C0K0 894 aaPredicted RBP8.88□□□□□ -0.99
IDH3A-206ENST00000558535 BCCIPQ9P287 314 aaKnown RBP eCLIP8.88□□□□□ -0.99
IDH3A-206ENST00000558535 WASHC2CQ9Y4E1 1318 aa8.88□□□□□ -0.99
IDH3A-206ENST00000558535 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.87□□□□□ -0.99
IDH3A-206ENST00000558535 TSPOAP1O95153 1857 aa8.87□□□□□ -0.99
IDH3A-206ENST00000558535 MIER1Q8N108 512 aa8.86□□□□□ -0.99
IDH3A-206ENST00000558535 SLC4A1APQ9BWU0 796 aaKnown RBP8.86□□□□□ -0.99
IDH3A-206ENST00000558535 RAPGEF6Q8TEU7 1601 aa8.86□□□□□ -0.99
IDH3A-206ENST00000558535 ATP10BO94823 1461 aa8.86□□□□□ -0.99
IDH3A-206ENST00000558535 NPM2Q86SE8 214 aaKnown RBP8.86□□□□□ -0.99
IDH3A-206ENST00000558535 ARAP3Q8WWN8 1544 aa8.85□□□□□ -0.99
IDH3A-206ENST00000558535 CENPJQ9HC77 1338 aaPredicted RBP8.85□□□□□ -0.99
IDH3A-206ENST00000558535 FAM43AQ8N2R8 423 aa8.85□□□□□ -0.99
IDH3A-206ENST00000558535 NEO1Q92859 1461 aa8.85□□□□□ -0.99
IDH3A-206ENST00000558535 ADRA2BP18089 450 aa8.84□□□□□ -0.99
IDH3A-206ENST00000558535 ABCA9Q8IUA7 1624 aa8.84□□□□□ -0.99
IDH3A-206ENST00000558535 WASHC2AQ641Q2 1341 aa8.84□□□□□ -0.99
IDH3A-206ENST00000558535 NOP58Q9Y2X3 529 aaKnown RBP8.83□□□□□ -1
IDH3A-206ENST00000558535 TULP1O00294 542 aaPredicted RBP8.82□□□□□ -1
IDH3A-206ENST00000558535 HSP90B1P14625 803 aaKnown RBP8.82□□□□□ -1
IDH3A-206ENST00000558535 COL17A1Q9UMD9 1497 aaPredicted RBP8.82□□□□□ -1
IDH3A-206ENST00000558535 IL27Q8NEV9 243 aa8.81□□□□□ -1
IDH3A-206ENST00000558535 NAP1L5Q96NT1 182 aaPredicted RBP8.81□□□□□ -1
IDH3A-206ENST00000558535 NUP153P49790 1475 aaKnown RBP8.81□□□□□ -1
IDH3A-206ENST00000558535 FMN1Q68DA7 1419 aa8.81□□□□□ -1
IDH3A-206ENST00000558535 KDM4FA0A1W2PPD8 638 aa8.8□□□□□ -1
IDH3A-206ENST00000558535 CFAP74Q9C0B2 1584 aa8.8□□□□□ -1
IDH3A-206ENST00000558535 ARID3AQ99856 593 aa8.8□□□□□ -1
IDH3A-206ENST00000558535 ADGRL1O94910 1474 aa8.8□□□□□ -1
IDH3A-206ENST00000558535 PLEKHD1A6NEE1 506 aa8.79□□□□□ -1
IDH3A-206ENST00000558535 KCNH8Q96L42 1107 aa8.79□□□□□ -1
IDH3A-206ENST00000558535 CALD1Q05682 793 aaKnown RBP8.79□□□□□ -1
IDH3A-206ENST00000558535 FHOD3Q2V2M9 1422 aa8.79□□□□□ -1
IDH3A-206ENST00000558535 HSP90AA2PQ14568 343 aaPredicted RBP8.78□□□□□ -1
IDH3A-206ENST00000558535 P3H3Q8IVL6 736 aa8.77□□□□□ -1
IDH3A-206ENST00000558535 IPO4Q8TEX9 1081 aaKnown RBP8.77□□□□□ -1
IDH3A-206ENST00000558535 A0A0U1RQG5 324 aaPredicted RBP8.77□□□□□ -1.01
IDH3A-206ENST00000558535 CNKSR2Q8WXI2 1034 aa8.77□□□□□ -1.01
IDH3A-206ENST00000558535 HECW1Q76N89 1606 aa8.76□□□□□ -1.01
IDH3A-206ENST00000558535 VGFO15240 615 aaPredicted RBP8.76□□□□□ -1.01
IDH3A-206ENST00000558535 ARID4BQ4LE39 1312 aaPredicted RBP8.76□□□□□ -1.01
IDH3A-206ENST00000558535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.75□□□□□ -1.01
IDH3A-206ENST00000558535 HNRNPUL2Q1KMD3 747 aaKnown RBP8.75□□□□□ -1.01
IDH3A-206ENST00000558535 HMGB1P09429 215 aaKnown RBP8.75□□□□□ -1.01
IDH3A-206ENST00000558535 MAGI2Q86UL8 1455 aa8.75□□□□□ -1.01
IDH3A-206ENST00000558535 DENND4BO75064 1496 aaPredicted RBP8.74□□□□□ -1.01
IDH3A-206ENST00000558535 UBTFP17480 764 aaKnown RBP8.73□□□□□ -1.01
IDH3A-206ENST00000558535 ZMYM4Q5VZL5 1548 aa8.73□□□□□ -1.01
IDH3A-206ENST00000558535 CHMP4AQ9BY43 222 aa8.73□□□□□ -1.01
IDH3A-206ENST00000558535 CLIP1P30622 1438 aa8.73□□□□□ -1.01
IDH3A-206ENST00000558535 ARHGAP35Q9NRY4 1499 aa8.73□□□□□ -1.01
IDH3A-206ENST00000558535 AKNAQ7Z591 1439 aa8.72□□□□□ -1.01
IDH3A-206ENST00000558535 FANCAO15360 1455 aa8.72□□□□□ -1.01
IDH3A-206ENST00000558535 CCDC18Q5T9S5 1454 aa8.72□□□□□ -1.01
IDH3A-206ENST00000558535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.72□□□□□ -1.01
IDH3A-206ENST00000558535 PPM1GO15355 546 aaPredicted RBP8.72□□□□□ -1.01
IDH3A-206ENST00000558535 PLCH2O75038 1416 aa8.72□□□□□ -1.01
IDH3A-206ENST00000558535 CDK11BP21127 795 aaKnown RBP8.71□□□□□ -1.01
IDH3A-206ENST00000558535 ARHGEF40Q8TER5 1519 aa8.71□□□□□ -1.02
IDH3A-206ENST00000558535 CNGB1Q14028 1251 aaPredicted RBP8.71□□□□□ -1.02
IDH3A-206ENST00000558535 NAP1L2Q9ULW6 460 aaPredicted RBP8.71□□□□□ -1.02
IDH3A-206ENST00000558535 POGZQ7Z3K3 1410 aa8.71□□□□□ -1.02
IDH3A-206ENST00000558535 HSP90AA1P07900 732 aaKnown RBP8.7□□□□□ -1.02
IDH3A-206ENST00000558535 FKBP8Q14318 412 aa8.7□□□□□ -1.02
IDH3A-206ENST00000558535 TEX2Q8IWB9 1127 aa8.7□□□□□ -1.02
IDH3A-206ENST00000558535 TROQ12816 1431 aaPredicted RBP8.7□□□□□ -1.02
IDH3A-206ENST00000558535 FRMPD1Q5SYB0 1578 aa8.7□□□□□ -1.02
IDH3A-206ENST00000558535 CASKIN1Q8WXD9 1431 aa8.7□□□□□ -1.02
IDH3A-206ENST00000558535 CHRM1P11229 460 aaPredicted RBP8.69□□□□□ -1.02
IDH3A-206ENST00000558535 KIF14Q15058 1648 aa8.69□□□□□ -1.02
IDH3A-206ENST00000558535 ARID3CA6NKF2 412 aa8.68□□□□□ -1.02
IDH3A-206ENST00000558535 C14orf37Q86TY3 774 aa8.68□□□□□ -1.02
IDH3A-206ENST00000558535 ADAMTSL3P82987 1691 aa8.68□□□□□ -1.02
IDH3A-206ENST00000558535 EFCAB2Q5VUJ9 269 aa8.68□□□□□ -1.02
IDH3A-206ENST00000558535 ANP32BQ92688 251 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms