RNA–Protein interactions for RNA: ENST00000557957.5

PDE8A-208, Transcript of phosphodiesterase 8A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDE8A, Length 3,716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-208ENST00000557957 PLIN1O60240 522 aa14.99□□□□□ -0.01
PDE8A-208ENST00000557957 RRP1P56182 461 aaKnown RBP14.98□□□□□ -0.01
PDE8A-208ENST00000557957 GSE1Q14687 1217 aa14.98□□□□□ -0.01
PDE8A-208ENST00000557957 SKAP1Q86WV1 359 aa14.97□□□□□ -0.01
PDE8A-208ENST00000557957 NESP48681 1621 aa14.97□□□□□ -0.01
PDE8A-208ENST00000557957 SMG6Q86US8 1419 aaKnown RBP14.96□□□□□ -0.01
PDE8A-208ENST00000557957 HFM1A2PYH4 1435 aa14.95□□□□□ -0.02
PDE8A-208ENST00000557957 RGS3P49796 1198 aa14.95□□□□□ -0.02
PDE8A-208ENST00000557957 CARD11Q9BXL7 1154 aa14.94□□□□□ -0.02
PDE8A-208ENST00000557957 NAIPQ13075 1403 aa14.94□□□□□ -0.02
PDE8A-208ENST00000557957 AQRO60306 1485 aaKnown RBP eCLIP14.94□□□□□ -0.025e-8■■■■■ 33
PDE8A-208ENST00000557957 PTPRKQ15262 1439 aa14.93□□□□□ -0.02
PDE8A-208ENST00000557957 NFKBIBQ15653 356 aa14.93□□□□□ -0.02
PDE8A-208ENST00000557957 PEG3Q9GZU2 1588 aa14.93□□□□□ -0.02
PDE8A-208ENST00000557957 BACH2Q9BYV9 841 aa14.92□□□□□ -0.02
PDE8A-208ENST00000557957 PCF11O94913 1555 aaKnown RBP14.92□□□□□ -0.02
PDE8A-208ENST00000557957 FRAT1Q92837 279 aaPredicted RBP14.92□□□□□ -0.02
PDE8A-208ENST00000557957 MAP3K1Q13233 1512 aa14.92□□□□□ -0.02
PDE8A-208ENST00000557957 PDS5BQ9NTI5 1447 aa14.91□□□□□ -0.02
PDE8A-208ENST00000557957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.021e-6■■□□□ 14.4
PDE8A-208ENST00000557957 BIVM-ERCC5R4GMW8 1640 aa14.9□□□□□ -0.02
PDE8A-208ENST00000557957 CFDP1Q9UEE9 299 aaPredicted RBP14.89□□□□□ -0.03
PDE8A-208ENST00000557957 PNISRQ8TF01 805 aaKnown RBP14.89□□□□□ -0.03
PDE8A-208ENST00000557957 CRBNQ96SW2 442 aa14.88□□□□□ -0.03
PDE8A-208ENST00000557957 HMGXB3Q12766 1538 aa14.88□□□□□ -0.03
PDE8A-208ENST00000557957 CC2D1BQ5T0F9 858 aaKnown RBP14.88□□□□□ -0.03
PDE8A-208ENST00000557957 NCOA1Q15788 1441 aa14.87□□□□□ -0.03
PDE8A-208ENST00000557957 CASKIN1Q8WXD9 1431 aa14.87□□□□□ -0.03
PDE8A-208ENST00000557957 MS4A1P11836 297 aa14.87□□□□□ -0.03
PDE8A-208ENST00000557957 MYOM3Q5VTT5 1437 aa14.87□□□□□ -0.03
PDE8A-208ENST00000557957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.87□□□□□ -0.03
PDE8A-208ENST00000557957 CDCA7LQ96GN5 454 aa14.87□□□□□ -0.03
PDE8A-208ENST00000557957 NCOA2Q15596 1464 aa14.86□□□□□ -0.03
PDE8A-208ENST00000557957 TSPY4P0CV99 314 aa14.85□□□□□ -0.03
PDE8A-208ENST00000557957 TSPY10P0CW01 314 aa14.85□□□□□ -0.03
PDE8A-208ENST00000557957 USP47Q96K76 1375 aa14.85□□□□□ -0.03
PDE8A-208ENST00000557957 FYCO1Q9BQS8 1478 aa14.84□□□□□ -0.03
PDE8A-208ENST00000557957 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
PDE8A-208ENST00000557957 CC2D2AQ9P2K1 1620 aa14.83□□□□□ -0.04
PDE8A-208ENST00000557957 PLEKHD1A6NEE1 506 aa14.83□□□□□ -0.04
PDE8A-208ENST00000557957 PTPN23Q9H3S7 1636 aa14.83□□□□□ -0.04
PDE8A-208ENST00000557957 FRAT2O75474 233 aaPredicted RBP14.82□□□□□ -0.04
PDE8A-208ENST00000557957 PKD2Q13563 968 aa14.82□□□□□ -0.04
PDE8A-208ENST00000557957 CANXP27824 592 aaKnown RBP14.81□□□□□ -0.04
PDE8A-208ENST00000557957 ST20-MTHFSA0A0A6YYL1 179 aa14.81□□□□□ -0.04
PDE8A-208ENST00000557957 MYBBP1AQ9BQG0 1328 aaKnown RBP14.81□□□□□ -0.04
PDE8A-208ENST00000557957 SLKQ9H2G2 1235 aaPredicted RBP14.8□□□□□ -0.04
PDE8A-208ENST00000557957 NAP1L5Q96NT1 182 aaPredicted RBP14.8□□□□□ -0.04
PDE8A-208ENST00000557957 RALBP1Q15311 655 aa14.79□□□□□ -0.04
PDE8A-208ENST00000557957 RGL3Q3MIN7 710 aa14.79□□□□□ -0.04
PDE8A-208ENST00000557957 GLIPR1L2Q4G1C9 344 aa14.79□□□□□ -0.04
PDE8A-208ENST00000557957 DCAF11Q8TEB1 546 aa14.79□□□□□ -0.04
PDE8A-208ENST00000557957 GAPVD1Q14C86 1478 aa14.78□□□□□ -0.04
PDE8A-208ENST00000557957 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.78□□□□□ -0.04
PDE8A-208ENST00000557957 KIF15Q9NS87 1388 aa14.78□□□□□ -0.04
PDE8A-208ENST00000557957 WDR43Q15061 677 aaKnown RBP eCLIP14.77□□□□□ -0.04
PDE8A-208ENST00000557957 NLRP13Q86W25 1043 aa14.77□□□□□ -0.04
PDE8A-208ENST00000557957 POLA1P09884 1462 aaPredicted RBP14.77□□□□□ -0.04
PDE8A-208ENST00000557957 UBE2Q2Q8WVN8 375 aa14.77□□□□□ -0.05
PDE8A-208ENST00000557957 PDE3BQ13370 1112 aa14.77□□□□□ -0.05
PDE8A-208ENST00000557957 RNF123Q5XPI4 1314 aa14.77□□□□□ -0.05
PDE8A-208ENST00000557957 WASHC2CQ9Y4E1 1318 aa14.76□□□□□ -0.05
PDE8A-208ENST00000557957 RSPH6AQ9H0K4 717 aa14.76□□□□□ -0.05
PDE8A-208ENST00000557957 ZNF644Q9H582 1327 aaPredicted RBP14.76□□□□□ -0.05
PDE8A-208ENST00000557957 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
PDE8A-208ENST00000557957 SPRYD3Q8NCJ5 442 aa14.75□□□□□ -0.05
PDE8A-208ENST00000557957 TOPBP1Q92547 1522 aa14.74□□□□□ -0.05
PDE8A-208ENST00000557957 KTN1Q86UP2 1357 aaKnown RBP14.74□□□□□ -0.05
PDE8A-208ENST00000557957 BECN1Q14457 450 aa14.73□□□□□ -0.05
PDE8A-208ENST00000557957 GZF1Q9H116 711 aaPredicted RBP14.73□□□□□ -0.05
PDE8A-208ENST00000557957 C20orf194Q5TEA3 1177 aa14.71□□□□□ -0.05
PDE8A-208ENST00000557957 UPF2Q9HAU5 1272 aaKnown RBP14.71□□□□□ -0.05
PDE8A-208ENST00000557957 ROCK2O75116 1388 aaKnown RBP14.71□□□□□ -0.05
PDE8A-208ENST00000557957 ANKRD30BQ9BXX2 1392 aa14.7□□□□□ -0.06
PDE8A-208ENST00000557957 CFAP43Q8NDM7 1665 aa14.7□□□□□ -0.06
PDE8A-208ENST00000557957 CENPQQ7L2Z9 268 aaPredicted RBP14.7□□□□□ -0.06
PDE8A-208ENST00000557957 ARID4BQ4LE39 1312 aaPredicted RBP14.69□□□□□ -0.06
PDE8A-208ENST00000557957 BRD4O60885 1362 aaPredicted RBP14.69□□□□□ -0.06
PDE8A-208ENST00000557957 DHX29Q7Z478 1369 aaKnown RBP14.69□□□□□ -0.06
PDE8A-208ENST00000557957 JPH4Q96JJ6 628 aa14.67□□□□□ -0.06
PDE8A-208ENST00000557957 VSIG10Q8N0Z9 540 aa14.66□□□□□ -0.06
PDE8A-208ENST00000557957 FAM43AQ8N2R8 423 aa14.66□□□□□ -0.06
PDE8A-208ENST00000557957 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
PDE8A-208ENST00000557957 EFCAB5A4FU69 1503 aa14.66□□□□□ -0.06
PDE8A-208ENST00000557957 L1TD1Q5T7N2 865 aaKnown RBP14.66□□□□□ -0.06
PDE8A-208ENST00000557957 PNNQ9H307 717 aaKnown RBP14.66□□□□□ -0.06
PDE8A-208ENST00000557957 POGKQ9P215 609 aa14.66□□□□□ -0.06
PDE8A-208ENST00000557957 CHGAP10645 457 aaKnown RBP14.65□□□□□ -0.06
PDE8A-208ENST00000557957 RPRD2Q5VT52 1461 aaKnown RBP14.64□□□□□ -0.07
PDE8A-208ENST00000557957 KDM5BQ9UGL1 1544 aa14.63□□□□□ -0.07
PDE8A-208ENST00000557957 NUP155O75694 1391 aa14.63□□□□□ -0.07
PDE8A-208ENST00000557957 CCDC146Q8IYE0 955 aa14.63□□□□□ -0.07
PDE8A-208ENST00000557957 PANK3Q9H999 370 aa14.63□□□□□ -0.07
PDE8A-208ENST00000557957 HNRNPMP52272 730 aaKnown RBP eCLIP14.62□□□□□ -0.071e-6■■■■□ 23.2
PDE8A-208ENST00000557957 KNSTRNQ9Y448 316 aa14.62□□□□□ -0.07
PDE8A-208ENST00000557957 MIA2Q96PC5 1412 aa14.62□□□□□ -0.07
PDE8A-208ENST00000557957 SUPT6HQ7KZ85 1726 aaKnown RBP14.61□□□□□ -0.07
PDE8A-208ENST00000557957 GOLGA2Q08379 1002 aa14.61□□□□□ -0.07
PDE8A-208ENST00000557957 NEUROD2Q15784 382 aa14.61□□□□□ -0.07
PDE8A-208ENST00000557957 HSP90AA1P07900 732 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms