RNA–Protein interactions for RNA: ENST00000557460.5

SRSF5-219, Transcript of serine and arginine rich splicing factor 5, human

TSL 5

Gene SRSF5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-219	ENST00000557460	HAX1	O00165	279 aa		13.85	□□□□□ -0.19
SRSF5-219	ENST00000557460	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.85	□□□□□ -0.19
SRSF5-219	ENST00000557460	DCAF8	Q5TAQ9	597 aa		13.84	□□□□□ -0.19
SRSF5-219	ENST00000557460	CCDC61	Q9Y6R9	512 aa		13.84	□□□□□ -0.19
SRSF5-219	ENST00000557460	EVX2	Q03828	476 aa		13.83	□□□□□ -0.2
SRSF5-219	ENST00000557460	PKD2	Q13563	968 aa		13.83	□□□□□ -0.2
SRSF5-219	ENST00000557460	PAK3	O75914	559 aa	Predicted RBP	13.82	□□□□□ -0.2
SRSF5-219	ENST00000557460	RTN4	Q9NQC3	1192 aa	Known RBP	13.82	□□□□□ -0.2
SRSF5-219	ENST00000557460	ZRANB1	Q9UGI0	708 aa		13.81	□□□□□ -0.2
SRSF5-219	ENST00000557460	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.81	□□□□□ -0.2
SRSF5-219	ENST00000557460	CHD1	O14646	1710 aa		13.79	□□□□□ -0.2
SRSF5-219	ENST00000557460	RANGAP1	P46060	587 aa	Predicted RBP	13.78	□□□□□ -0.2
SRSF5-219	ENST00000557460	ZNF579	Q8NAF0	562 aa	Known RBP	13.77	□□□□□ -0.21
SRSF5-219	ENST00000557460	DISP1	Q96F81	1524 aa		13.77	□□□□□ -0.21
SRSF5-219	ENST00000557460	JPH4	Q96JJ6	628 aa		13.77	□□□□□ -0.21
SRSF5-219	ENST00000557460	FMN1	Q68DA7	1419 aa		13.76	□□□□□ -0.21
SRSF5-219	ENST00000557460	CLASP1	Q7Z460	1538 aa		13.75	□□□□□ -0.21
SRSF5-219	ENST00000557460	FHOD3	Q2V2M9	1422 aa		13.74	□□□□□ -0.21
SRSF5-219	ENST00000557460	CHRM1	P11229	460 aa	Predicted RBP	13.74	□□□□□ -0.21
SRSF5-219	ENST00000557460	SHROOM2	Q13796	1616 aa		13.74	□□□□□ -0.21
SRSF5-219	ENST00000557460	KIAA0556	O60303	1618 aa		13.73	□□□□□ -0.21
SRSF5-219	ENST00000557460	CARMIL2	Q6F5E8	1435 aa		13.73	□□□□□ -0.21
SRSF5-219	ENST00000557460	CASKIN1	Q8WXD9	1431 aa		13.73	□□□□□ -0.21
SRSF5-219	ENST00000557460	MAP3K1	Q13233	1512 aa		13.72	□□□□□ -0.21
SRSF5-219	ENST00000557460	FYCO1	Q9BQS8	1478 aa		13.7	□□□□□ -0.22
SRSF5-219	ENST00000557460	PYGB	P11216	843 aa		13.69	□□□□□ -0.22
SRSF5-219	ENST00000557460	P3H3	Q8IVL6	736 aa		13.69	□□□□□ -0.22
SRSF5-219	ENST00000557460	PHF12	Q96QT6	1004 aa		13.69	□□□□□ -0.22
SRSF5-219	ENST00000557460	PRG4	Q92954	1404 aa	Predicted RBP	13.68	□□□□□ -0.22
SRSF5-219	ENST00000557460	ECM2	O94769	699 aa	Predicted RBP	13.68	□□□□□ -0.22
SRSF5-219	ENST00000557460	KIF12	Q96FN5	646 aa		13.68	□□□□□ -0.22
SRSF5-219	ENST00000557460	PCF11	O94913	1555 aa	Known RBP	13.66	□□□□□ -0.22
SRSF5-219	ENST00000557460	SGIP1	Q9BQI5	828 aa		13.63	□□□□□ -0.23
SRSF5-219	ENST00000557460	MAP3K13	O43283	966 aa		13.62	□□□□□ -0.23
SRSF5-219	ENST00000557460	CLCN6	P51797	869 aa		13.62	□□□□□ -0.23
SRSF5-219	ENST00000557460	RNF25	Q96BH1	459 aa	Predicted RBP	13.61	□□□□□ -0.23
SRSF5-219	ENST00000557460	TIAM1	Q13009	1591 aa		13.61	□□□□□ -0.23
SRSF5-219	ENST00000557460	CCDC18	Q5T9S5	1454 aa		13.6	□□□□□ -0.23
SRSF5-219	ENST00000557460	PTPRG	P23470	1445 aa		13.59	□□□□□ -0.23
SRSF5-219	ENST00000557460	HECW1	Q76N89	1606 aa		13.58	□□□□□ -0.24
SRSF5-219	ENST00000557460	RGL2	O15211	777 aa		13.58	□□□□□ -0.24
SRSF5-219	ENST00000557460	SP7	Q8TDD2	431 aa	Predicted RBP	13.58	□□□□□ -0.24
SRSF5-219	ENST00000557460	ABCA8	O94911	1581 aa		13.58	□□□□□ -0.24
SRSF5-219	ENST00000557460	CFAP43	Q8NDM7	1665 aa		13.57	□□□□□ -0.24
SRSF5-219	ENST00000557460	NUP153	P49790	1475 aa	Known RBP	13.57	□□□□□ -0.24
SRSF5-219	ENST00000557460	RAPGEF6	Q8TEU7	1601 aa		13.57	□□□□□ -0.24
SRSF5-219	ENST00000557460	LRRC9	Q6ZRR7	1453 aa		13.56	□□□□□ -0.24
SRSF5-219	ENST00000557460	EPRS	P07814	1512 aa	Known RBP	13.56	□□□□□ -0.24
SRSF5-219	ENST00000557460	TRIM26	Q12899	539 aa	Predicted RBP	13.56	□□□□□ -0.24
SRSF5-219	ENST00000557460	PCDHB13	Q9Y5F0	798 aa		13.56	□□□□□ -0.24
SRSF5-219	ENST00000557460	ERCC6L2	Q5T890	1561 aa		13.56	□□□□□ -0.24
SRSF5-219	ENST00000557460	PLB1	Q6P1J6	1458 aa		13.55	□□□□□ -0.24
SRSF5-219	ENST00000557460	KANK4	Q5T7N3	995 aa	Predicted RBP	13.55	□□□□□ -0.24
SRSF5-219	ENST00000557460	MS4A3	Q96HJ5	214 aa		13.55	□□□□□ -0.24
SRSF5-219	ENST00000557460	GABBR2	O75899	941 aa		13.54	□□□□□ -0.24
SRSF5-219	ENST00000557460	IFNL1	Q8IU54	200 aa		13.54	□□□□□ -0.24
SRSF5-219	ENST00000557460	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.53	□□□□□ -0.24
SRSF5-219	ENST00000557460	UACA	Q9BZF9	1416 aa		13.53	□□□□□ -0.24
SRSF5-219	ENST00000557460	UHRF1BP1L	A0JNW5	1464 aa		13.53	□□□□□ -0.24
SRSF5-219	ENST00000557460	RIOK3	O14730	519 aa	Known RBP	13.52	□□□□□ -0.25
SRSF5-219	ENST00000557460	GALR2	O43603	387 aa	Predicted RBP	13.52	□□□□□ -0.25
SRSF5-219	ENST00000557460	LRRIQ1	Q96JM4	1722 aa		13.51	□□□□□ -0.25
SRSF5-219	ENST00000557460	PCDHB8	Q9UN66	801 aa		13.51	□□□□□ -0.25
SRSF5-219	ENST00000557460	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.5	□□□□□ -0.25
SRSF5-219	ENST00000557460	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.5	□□□□□ -0.25
SRSF5-219	ENST00000557460	ABCC2	Q92887	1545 aa		13.49	□□□□□ -0.25
SRSF5-219	ENST00000557460	EHBP1L1	Q8N3D4	1523 aa		13.48	□□□□□ -0.25
SRSF5-219	ENST00000557460	ATP10B	O94823	1461 aa		13.48	□□□□□ -0.25
SRSF5-219	ENST00000557460	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.47	□□□□□ -0.25
SRSF5-219	ENST00000557460	MTUS2	Q5JR59	1369 aa		13.46	□□□□□ -0.25
SRSF5-219	ENST00000557460	CDK13	Q14004	1512 aa	Known RBP	13.46	□□□□□ -0.25
SRSF5-219	ENST00000557460	TRPC6	Q9Y210	931 aa		13.46	□□□□□ -0.25
SRSF5-219	ENST00000557460	ARHGEF11	O15085	1522 aa		13.45	□□□□□ -0.26
SRSF5-219	ENST00000557460	MAGI3	Q5TCQ9	1506 aa		13.45	□□□□□ -0.26
SRSF5-219	ENST00000557460	RRBP1	Q9P2E9	1410 aa	Known RBP	13.45	□□□□□ -0.26
SRSF5-219	ENST00000557460	KDM5B	Q9UGL1	1544 aa		13.44	□□□□□ -0.26
SRSF5-219	ENST00000557460	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.44	□□□□□ -0.26
SRSF5-219	ENST00000557460	VGF	O15240	615 aa	Predicted RBP	13.43	□□□□□ -0.26
SRSF5-219	ENST00000557460	TRO	Q12816	1431 aa	Predicted RBP	13.43	□□□□□ -0.26
SRSF5-219	ENST00000557460	NCOA2	Q15596	1464 aa		13.42	□□□□□ -0.26
SRSF5-219	ENST00000557460	PDAP1	Q13442	181 aa	Known RBP	13.41	□□□□□ -0.26
SRSF5-219	ENST00000557460	PCGF6	Q9BYE7	350 aa		13.41	□□□□□ -0.26
SRSF5-219	ENST00000557460	PHLDB1	Q86UU1	1377 aa		13.41	□□□□□ -0.26
SRSF5-219	ENST00000557460	TIE1	P35590	1138 aa		13.4	□□□□□ -0.26
SRSF5-219	ENST00000557460	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
SRSF5-219	ENST00000557460	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.39	□□□□□ -0.27
SRSF5-219	ENST00000557460	PLEKHD1	A6NEE1	506 aa		13.39	□□□□□ -0.27
SRSF5-219	ENST00000557460	TAOK2	Q9UL54	1235 aa		13.39	□□□□□ -0.27
SRSF5-219	ENST00000557460	PSEN1	P49768	467 aa		13.38	□□□□□ -0.27
SRSF5-219	ENST00000557460	ADCY10	Q96PN6	1610 aa		13.38	□□□□□ -0.27
SRSF5-219	ENST00000557460	MYOM3	Q5VTT5	1437 aa		13.38	□□□□□ -0.27
SRSF5-219	ENST00000557460	CCNB3	Q8WWL7	1395 aa		13.37	□□□□□ -0.27
SRSF5-219	ENST00000557460	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.37	□□□□□ -0.27
SRSF5-219	ENST00000557460	ZFP91	Q96JP5	570 aa	Predicted RBP	13.37	□□□□□ -0.27
SRSF5-219	ENST00000557460	ARID3C	A6NKF2	412 aa		13.36	□□□□□ -0.27
SRSF5-219	ENST00000557460	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.36	□□□□□ -0.27
SRSF5-219	ENST00000557460	MIA2	Q96PC5	1412 aa		13.36	□□□□□ -0.27
SRSF5-219	ENST00000557460	FGD6	Q6ZV73	1430 aa		13.35	□□□□□ -0.27
SRSF5-219	ENST00000557460	ASTL	Q6HA08	431 aa	Predicted RBP	13.34	□□□□□ -0.27
SRSF5-219	ENST00000557460	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms