RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 FBLN2P98095 1184 aa11.25□□□□□ -0.61
ABCB1-210ENST00000543898 VSIG10Q8N0Z9 540 aa11.25□□□□□ -0.61
ABCB1-210ENST00000543898 CUX1P39880 1505 aa11.24□□□□□ -0.61
ABCB1-210ENST00000543898 WDR43Q15061 677 aaKnown RBP eCLIP11.24□□□□□ -0.61
ABCB1-210ENST00000543898 DCAF11Q8TEB1 546 aa11.24□□□□□ -0.61
ABCB1-210ENST00000543898 PKD2Q13563 968 aa11.23□□□□□ -0.61
ABCB1-210ENST00000543898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.23□□□□□ -0.61
ABCB1-210ENST00000543898 USP35Q9P2H5 1018 aa11.23□□□□□ -0.61
ABCB1-210ENST00000543898 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
ABCB1-210ENST00000543898 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.23□□□□□ -0.61
ABCB1-210ENST00000543898 CFDP1Q9UEE9 299 aaPredicted RBP11.23□□□□□ -0.61
ABCB1-210ENST00000543898 GSE1Q14687 1217 aa11.22□□□□□ -0.61
ABCB1-210ENST00000543898 SKAP1Q86WV1 359 aa11.21□□□□□ -0.61
ABCB1-210ENST00000543898 TDRD9Q8NDG6 1382 aaKnown RBP11.2□□□□□ -0.62
ABCB1-210ENST00000543898 ST20-MTHFSA0A0A6YYL1 179 aa11.2□□□□□ -0.62
ABCB1-210ENST00000543898 HFM1A2PYH4 1435 aa11.2□□□□□ -0.62
ABCB1-210ENST00000543898 CRBNQ96SW2 442 aa11.19□□□□□ -0.62
ABCB1-210ENST00000543898 TSPY4P0CV99 314 aa11.19□□□□□ -0.62
ABCB1-210ENST00000543898 TSPY10P0CW01 314 aa11.19□□□□□ -0.62
ABCB1-210ENST00000543898 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
ABCB1-210ENST00000543898 UPF2Q9HAU5 1272 aaKnown RBP11.18□□□□□ -0.62
ABCB1-210ENST00000543898 NAIPQ13075 1403 aa11.18□□□□□ -0.62
ABCB1-210ENST00000543898 USP47Q96K76 1375 aa11.18□□□□□ -0.62
ABCB1-210ENST00000543898 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
ABCB1-210ENST00000543898 FGD5Q6ZNL6 1462 aa11.18□□□□□ -0.62
ABCB1-210ENST00000543898 SMG6Q86US8 1419 aaKnown RBP11.17□□□□□ -0.62
ABCB1-210ENST00000543898 RALBP1Q15311 655 aa11.17□□□□□ -0.62
ABCB1-210ENST00000543898 NFKBIBQ15653 356 aa11.17□□□□□ -0.62
ABCB1-210ENST00000543898 PNISRQ8TF01 805 aaKnown RBP11.17□□□□□ -0.62
ABCB1-210ENST00000543898 CASKIN1Q8WXD9 1431 aa11.17□□□□□ -0.62
ABCB1-210ENST00000543898 BACH2Q9BYV9 841 aa11.16□□□□□ -0.62
ABCB1-210ENST00000543898 SLKQ9H2G2 1235 aaPredicted RBP11.16□□□□□ -0.62
ABCB1-210ENST00000543898 NCOA2Q15596 1464 aa11.16□□□□□ -0.62
ABCB1-210ENST00000543898 PDIA4P13667 645 aaKnown RBP11.16□□□□□ -0.62
ABCB1-210ENST00000543898 ZNF644Q9H582 1327 aaPredicted RBP11.16□□□□□ -0.62
ABCB1-210ENST00000543898 MYBBP1AQ9BQG0 1328 aaKnown RBP11.15□□□□□ -0.62
ABCB1-210ENST00000543898 MS4A1P11836 297 aa11.15□□□□□ -0.62
ABCB1-210ENST00000543898 NLRP13Q86W25 1043 aa11.15□□□□□ -0.62
ABCB1-210ENST00000543898 CADPSQ9ULU8 1353 aa11.15□□□□□ -0.62
ABCB1-210ENST00000543898 PTPRKQ15262 1439 aa11.15□□□□□ -0.62
ABCB1-210ENST00000543898 BECN1Q14457 450 aa11.15□□□□□ -0.62
ABCB1-210ENST00000543898 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
ABCB1-210ENST00000543898 FRAT1Q92837 279 aaPredicted RBP11.15□□□□□ -0.62
ABCB1-210ENST00000543898 KTN1Q86UP2 1357 aaKnown RBP11.14□□□□□ -0.63
ABCB1-210ENST00000543898 CFTRP13569 1480 aa11.14□□□□□ -0.63
ABCB1-210ENST00000543898 RAD54L2Q9Y4B4 1467 aa11.14□□□□□ -0.63
ABCB1-210ENST00000543898 AQRO60306 1485 aaKnown RBP eCLIP11.14□□□□□ -0.63
ABCB1-210ENST00000543898 PCF11O94913 1555 aaKnown RBP11.14□□□□□ -0.63
ABCB1-210ENST00000543898 NAP1L5Q96NT1 182 aaPredicted RBP11.13□□□□□ -0.63
ABCB1-210ENST00000543898 KIF15Q9NS87 1388 aa11.13□□□□□ -0.63
ABCB1-210ENST00000543898 PDE3BQ13370 1112 aa11.13□□□□□ -0.63
ABCB1-210ENST00000543898 KNSTRNQ9Y448 316 aa11.12□□□□□ -0.63
ABCB1-210ENST00000543898 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
ABCB1-210ENST00000543898 NEUROD2Q15784 382 aa11.12□□□□□ -0.63
ABCB1-210ENST00000543898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.12□□□□□ -0.63
ABCB1-210ENST00000543898 MAP3K1Q13233 1512 aa11.12□□□□□ -0.63
ABCB1-210ENST00000543898 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
ABCB1-210ENST00000543898 NCOA1Q15788 1441 aa11.1□□□□□ -0.63
ABCB1-210ENST00000543898 FRAT2O75474 233 aaPredicted RBP11.1□□□□□ -0.63
ABCB1-210ENST00000543898 BICRAQ9NZM4 1560 aa11.1□□□□□ -0.63
ABCB1-210ENST00000543898 ROCK2O75116 1388 aaKnown RBP11.1□□□□□ -0.63
ABCB1-210ENST00000543898 NUP155O75694 1391 aa11.1□□□□□ -0.63
ABCB1-210ENST00000543898 FAM161AQ3B820 660 aa11.09□□□□□ -0.63
ABCB1-210ENST00000543898 KLHL34Q8N239 644 aa11.09□□□□□ -0.63
ABCB1-210ENST00000543898 BIVM-ERCC5R4GMW8 1640 aa11.08□□□□□ -0.63
ABCB1-210ENST00000543898 HSP90AA1P07900 732 aaKnown RBP11.08□□□□□ -0.64
ABCB1-210ENST00000543898 AEBP2Q6ZN18 517 aaPredicted RBP11.08□□□□□ -0.64
ABCB1-210ENST00000543898 UNC13AQ9UPW8 1703 aa11.08□□□□□ -0.64
ABCB1-210ENST00000543898 PEG3Q9GZU2 1588 aa11.08□□□□□ -0.64
ABCB1-210ENST00000543898 CCDC146Q8IYE0 955 aa11.07□□□□□ -0.64
ABCB1-210ENST00000543898 ARID4BQ4LE39 1312 aaPredicted RBP11.07□□□□□ -0.64
ABCB1-210ENST00000543898 CENPQQ7L2Z9 268 aaPredicted RBP11.07□□□□□ -0.64
ABCB1-210ENST00000543898 PANK3Q9H999 370 aa11.07□□□□□ -0.64
ABCB1-210ENST00000543898 NCAPD3P42695 1498 aa11.06□□□□□ -0.64
ABCB1-210ENST00000543898 PTPN23Q9H3S7 1636 aa11.06□□□□□ -0.64
ABCB1-210ENST00000543898 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
ABCB1-210ENST00000543898 TMF1P82094 1093 aa11.05□□□□□ -0.64
ABCB1-210ENST00000543898 GOLGA2Q08379 1002 aa11.05□□□□□ -0.64
ABCB1-210ENST00000543898 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
ABCB1-210ENST00000543898 HAP1P54257 671 aaPredicted RBP11.03□□□□□ -0.64
ABCB1-210ENST00000543898 C20orf194Q5TEA3 1177 aa11.03□□□□□ -0.64
ABCB1-210ENST00000543898 BRD4O60885 1362 aaPredicted RBP11.03□□□□□ -0.64
ABCB1-210ENST00000543898 FANCD2Q9BXW9 1451 aa11.03□□□□□ -0.64
ABCB1-210ENST00000543898 L1TD1Q5T7N2 865 aaKnown RBP11.03□□□□□ -0.64
ABCB1-210ENST00000543898 TRIM44Q96DX7 344 aaPredicted RBP11.03□□□□□ -0.64
ABCB1-210ENST00000543898 RSPH6AQ9H0K4 717 aa11.03□□□□□ -0.64
ABCB1-210ENST00000543898 ANKRD30BQ9BXX2 1392 aa11.03□□□□□ -0.64
ABCB1-210ENST00000543898 BCL11BQ9C0K0 894 aaPredicted RBP11.01□□□□□ -0.65
ABCB1-210ENST00000543898 PNNQ9H307 717 aaKnown RBP11.01□□□□□ -0.65
ABCB1-210ENST00000543898 ADAMTS8Q9UP79 889 aa11.01□□□□□ -0.65
ABCB1-210ENST00000543898 CHMP7Q8WUX9 453 aaPredicted RBP11□□□□□ -0.65
ABCB1-210ENST00000543898 ANP32BQ92688 251 aaKnown RBP11□□□□□ -0.65
ABCB1-210ENST00000543898 ANKRD30AQ9BXX3 1397 aa11□□□□□ -0.65
ABCB1-210ENST00000543898 CLUAP1Q96AJ1 413 aa10.99□□□□□ -0.65
ABCB1-210ENST00000543898 CHGAP10645 457 aaKnown RBP10.99□□□□□ -0.65
ABCB1-210ENST00000543898 HNRNPMP52272 730 aaKnown RBP eCLIP10.99□□□□□ -0.65
ABCB1-210ENST00000543898 EFCAB5A4FU69 1503 aa10.98□□□□□ -0.65
ABCB1-210ENST00000543898 AMER1Q5JTC6 1135 aaPredicted RBP10.98□□□□□ -0.65
ABCB1-210ENST00000543898 COG6Q9Y2V7 657 aa10.98□□□□□ -0.65
ABCB1-210ENST00000543898 GOLGA6L3A6NEY3 463 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms