RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
ABCB1-210ENST00000543898 SUPT5HO00267 1087 aaKnown RBP14.52□□□□□ -0.09
ABCB1-210ENST00000543898 SHROOM4Q9ULL8 1493 aa14.45□□□□□ -0.1
ABCB1-210ENST00000543898 DCAF8L2P0C7V8 631 aa14.22□□□□□ -0.13
ABCB1-210ENST00000543898 PCGF6Q9BYE7 350 aa14.16□□□□□ -0.14
ABCB1-210ENST00000543898 HRCP23327 699 aa14.02□□□□□ -0.16
ABCB1-210ENST00000543898 PELP1Q8IZL8 1130 aaKnown RBP13.93□□□□□ -0.18
ABCB1-210ENST00000543898 PPARGC1BQ86YN6 1023 aaKnown RBP13.91□□□□□ -0.18
ABCB1-210ENST00000543898 MYT1Q01538 1121 aa13.82□□□□□ -0.2
ABCB1-210ENST00000543898 CHIC1Q5VXU3 224 aa13.75□□□□□ -0.21
ABCB1-210ENST00000543898 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
ABCB1-210ENST00000543898 LOC105371045A0A1W2PR82 267 aa13.65□□□□□ -0.22
ABCB1-210ENST00000543898 FAM9AQ8IZU1 332 aaPredicted RBP13.55□□□□□ -0.24
ABCB1-210ENST00000543898 TRIM26Q12899 539 aaPredicted RBP13.52□□□□□ -0.25
ABCB1-210ENST00000543898 ZEB1P37275 1124 aaPredicted RBP13.46□□□□□ -0.26
ABCB1-210ENST00000543898 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
ABCB1-210ENST00000543898 TRIM41Q8WV44 630 aa13.33□□□□□ -0.28
ABCB1-210ENST00000543898 TTBK1Q5TCY1 1321 aaPredicted RBP13.32□□□□□ -0.28
ABCB1-210ENST00000543898 CCER1Q8TC90 406 aaPredicted RBP13.27□□□□□ -0.28
ABCB1-210ENST00000543898 CENPBP07199 599 aaPredicted RBP13.22□□□□□ -0.29
ABCB1-210ENST00000543898 SCAF1Q9H7N4 1312 aaKnown RBP13.19□□□□□ -0.3
ABCB1-210ENST00000543898 DCAF1Q9Y4B6 1507 aa13.15□□□□□ -0.3
ABCB1-210ENST00000543898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.14□□□□□ -0.31
ABCB1-210ENST00000543898 YTHDC1Q96MU7 727 aaKnown RBP13.14□□□□□ -0.31
ABCB1-210ENST00000543898 GTF3C3Q9Y5Q9 886 aa13.07□□□□□ -0.32
ABCB1-210ENST00000543898 ZCCHC6Q5VYS8 1495 aaKnown RBP13.04□□□□□ -0.32
ABCB1-210ENST00000543898 DIEXFQ68CQ4 756 aaKnown RBP13.03□□□□□ -0.32
ABCB1-210ENST00000543898 ACIN1Q9UKV3 1341 aaKnown RBP13.02□□□□□ -0.33
ABCB1-210ENST00000543898 NEUROD1Q13562 356 aa12.98□□□□□ -0.33
ABCB1-210ENST00000543898 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
ABCB1-210ENST00000543898 CCDC180Q9P1Z9 1646 aa12.85□□□□□ -0.35
ABCB1-210ENST00000543898 UBTFP17480 764 aaKnown RBP12.85□□□□□ -0.35
ABCB1-210ENST00000543898 RANGAP1P46060 587 aaPredicted RBP12.83□□□□□ -0.36
ABCB1-210ENST00000543898 APLP2Q06481 763 aa12.8□□□□□ -0.36
ABCB1-210ENST00000543898 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
ABCB1-210ENST00000543898 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
ABCB1-210ENST00000543898 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
ABCB1-210ENST00000543898 SLC24A1O60721 1099 aa12.62□□□□□ -0.39
ABCB1-210ENST00000543898 MIER1Q8N108 512 aa12.6□□□□□ -0.39
ABCB1-210ENST00000543898 RSF1Q96T23 1441 aaPredicted RBP12.56□□□□□ -0.4
ABCB1-210ENST00000543898 BCL11AQ9H165 835 aa12.55□□□□□ -0.4
ABCB1-210ENST00000543898 BCANQ96GW7 911 aa12.5□□□□□ -0.41
ABCB1-210ENST00000543898 SCRIBQ14160 1630 aa12.49□□□□□ -0.41
ABCB1-210ENST00000543898 ITGAEP38570 1179 aa12.49□□□□□ -0.41
ABCB1-210ENST00000543898 NEFLP07196 543 aa12.45□□□□□ -0.42
ABCB1-210ENST00000543898 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
ABCB1-210ENST00000543898 RB1CC1Q8TDY2 1594 aa12.39□□□□□ -0.43
ABCB1-210ENST00000543898 CEP162Q5TB80 1403 aa12.34□□□□□ -0.43
ABCB1-210ENST00000543898 ATP1B4Q9UN42 357 aaPredicted RBP12.33□□□□□ -0.44
ABCB1-210ENST00000543898 ABCC9O60706 1549 aa12.31□□□□□ -0.44
ABCB1-210ENST00000543898 SUPT16HQ9Y5B9 1047 aaKnown RBP12.29□□□□□ -0.44
ABCB1-210ENST00000543898 FKBP8Q14318 412 aa12.28□□□□□ -0.44
ABCB1-210ENST00000543898 CECR2Q9BXF3 1484 aa12.27□□□□□ -0.45
ABCB1-210ENST00000543898 ANP32EQ9BTT0 268 aa12.23□□□□□ -0.45
ABCB1-210ENST00000543898 CLSPNQ9HAW4 1339 aa12.22□□□□□ -0.45
ABCB1-210ENST00000543898 TNIKQ9UKE5 1360 aa12.2□□□□□ -0.46
ABCB1-210ENST00000543898 SOGA1O94964 1423 aa12.19□□□□□ -0.46
ABCB1-210ENST00000543898 DDX10Q13206 875 aaKnown RBP12.19□□□□□ -0.46
ABCB1-210ENST00000543898 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
ABCB1-210ENST00000543898 TRIM52Q96A61 297 aa12.16□□□□□ -0.46
ABCB1-210ENST00000543898 TSHZ2Q9NRE2 1034 aa12.16□□□□□ -0.46
ABCB1-210ENST00000543898 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
ABCB1-210ENST00000543898 MROH2BQ7Z745 1585 aa12.15□□□□□ -0.46
ABCB1-210ENST00000543898 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
ABCB1-210ENST00000543898 FAM50AQ14320 339 aaKnown RBP12.14□□□□□ -0.47
ABCB1-210ENST00000543898 CLIP1P30622 1438 aa12.13□□□□□ -0.47
ABCB1-210ENST00000543898 HIRIP3Q9BW71 556 aaPredicted RBP12.13□□□□□ -0.47
ABCB1-210ENST00000543898 ABCC8Q09428 1581 aa12.13□□□□□ -0.47
ABCB1-210ENST00000543898 ANP32CO43423 234 aa12.12□□□□□ -0.47
ABCB1-210ENST00000543898 CNGB1Q14028 1251 aaPredicted RBP12.1□□□□□ -0.47
ABCB1-210ENST00000543898 GOLGA3Q08378 1498 aa12.09□□□□□ -0.47
ABCB1-210ENST00000543898 WRNQ14191 1432 aaPredicted RBP eCLIP12.08□□□□□ -0.48
ABCB1-210ENST00000543898 CDK11AQ9UQ88 783 aaPredicted RBP12.07□□□□□ -0.48
ABCB1-210ENST00000543898 KCNH8Q96L42 1107 aa12.07□□□□□ -0.48
ABCB1-210ENST00000543898 WIZO95785 1651 aa12.06□□□□□ -0.48
ABCB1-210ENST00000543898 IRX6P78412 446 aaPredicted RBP12.05□□□□□ -0.48
ABCB1-210ENST00000543898 RUSC2Q8N2Y8 1516 aa12.03□□□□□ -0.48
ABCB1-210ENST00000543898 EEA1Q15075 1411 aa12.03□□□□□ -0.48
ABCB1-210ENST00000543898 RBM19Q9Y4C8 960 aaKnown RBP12.01□□□□□ -0.49
ABCB1-210ENST00000543898 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
ABCB1-210ENST00000543898 POLR3GLQ9BT43 218 aa11.98□□□□□ -0.49
ABCB1-210ENST00000543898 P3H3Q8IVL6 736 aa11.97□□□□□ -0.49
ABCB1-210ENST00000543898 SIN3AQ96ST3 1273 aa11.97□□□□□ -0.49
ABCB1-210ENST00000543898 KANK4Q5T7N3 995 aaPredicted RBP11.96□□□□□ -0.49
ABCB1-210ENST00000543898 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
ABCB1-210ENST00000543898 VPS8Q8N3P4 1428 aa11.94□□□□□ -0.5
ABCB1-210ENST00000543898 DHX57Q6P158 1386 aaKnown RBP11.91□□□□□ -0.5
ABCB1-210ENST00000543898 BAZ1AQ9NRL2 1556 aaPredicted RBP11.91□□□□□ -0.5
ABCB1-210ENST00000543898 NBR1Q14596 966 aa11.9□□□□□ -0.5
ABCB1-210ENST00000543898 RTL5Q5HYW3 569 aaPredicted RBP11.9□□□□□ -0.5
ABCB1-210ENST00000543898 FAM9BQ8IZU0 186 aa11.87□□□□□ -0.51
ABCB1-210ENST00000543898 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
ABCB1-210ENST00000543898 NACADO15069 1562 aa11.86□□□□□ -0.51
ABCB1-210ENST00000543898 TONSLQ96HA7 1378 aa11.85□□□□□ -0.51
ABCB1-210ENST00000543898 CCNB3Q8WWL7 1395 aa11.83□□□□□ -0.52
ABCB1-210ENST00000543898 RAPGEF2Q9Y4G8 1499 aa11.81□□□□□ -0.52
ABCB1-210ENST00000543898 SENP3-EIF4A1A0A087X0R7 540 aa11.79□□□□□ -0.52
ABCB1-210ENST00000543898 TOP2AP11388 1531 aaKnown RBP11.78□□□□□ -0.52
ABCB1-210ENST00000543898 RAB3GAP2Q9H2M9 1393 aa11.78□□□□□ -0.52
ABCB1-210ENST00000543898 NPM2Q86SE8 214 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms