RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
CTNNA1-221ENST00000520339 SAMD9Q5K651 1589 aa15.41■□□□□ 0.06
CTNNA1-221ENST00000520339 PROM2Q8N271 834 aa15.41■□□□□ 0.06
CTNNA1-221ENST00000520339 FHOD3Q2V2M9 1422 aa15.41■□□□□ 0.06
CTNNA1-221ENST00000520339 ADGRL1O94910 1474 aa15.37■□□□□ 0.05
CTNNA1-221ENST00000520339 NUP153P49790 1475 aaKnown RBP15.37■□□□□ 0.05
CTNNA1-221ENST00000520339 PLEKHD1A6NEE1 506 aa15.36■□□□□ 0.05
CTNNA1-221ENST00000520339 PHLDB1Q86UU1 1377 aa15.36■□□□□ 0.05
CTNNA1-221ENST00000520339 UBTFP17480 764 aaKnown RBP15.35■□□□□ 0.05
CTNNA1-221ENST00000520339 CFAP43Q8NDM7 1665 aa15.34■□□□□ 0.05
CTNNA1-221ENST00000520339 ARAP3Q8WWN8 1544 aa15.33■□□□□ 0.05
CTNNA1-221ENST00000520339 DSG3P32926 999 aa15.33■□□□□ 0.04
CTNNA1-221ENST00000520339 RAPGEF6Q8TEU7 1601 aa15.32■□□□□ 0.04
CTNNA1-221ENST00000520339 RAPGEF3O95398 923 aa15.32■□□□□ 0.04
CTNNA1-221ENST00000520339 KIF21BO75037 1637 aa15.32■□□□□ 0.04
CTNNA1-221ENST00000520339 ILDR1Q86SU0 546 aaPredicted RBP15.3■□□□□ 0.04
CTNNA1-221ENST00000520339 EFCAB5A4FU69 1503 aa15.29■□□□□ 0.04
CTNNA1-221ENST00000520339 NEO1Q92859 1461 aa15.28■□□□□ 0.04
CTNNA1-221ENST00000520339 ABCA9Q8IUA7 1624 aa15.28■□□□□ 0.04
CTNNA1-221ENST00000520339 VASPP50552 380 aaPredicted RBP15.26■□□□□ 0.03
CTNNA1-221ENST00000520339 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
CTNNA1-221ENST00000520339 ARHGAP35Q9NRY4 1499 aa15.23■□□□□ 0.03
CTNNA1-221ENST00000520339 ATP1B4Q9UN42 357 aaPredicted RBP15.22■□□□□ 0.03
CTNNA1-221ENST00000520339 FMN1Q68DA7 1419 aa15.22■□□□□ 0.03
CTNNA1-221ENST00000520339 AKNAQ7Z591 1439 aa15.21■□□□□ 0.03
CTNNA1-221ENST00000520339 CDK13Q14004 1512 aaKnown RBP15.19■□□□□ 0.02
CTNNA1-221ENST00000520339 CDK11AQ9UQ88 783 aaPredicted RBP15.19■□□□□ 0.02
CTNNA1-221ENST00000520339 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
CTNNA1-221ENST00000520339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.18■□□□□ 0.026e-6■■■■■ 38.2
CTNNA1-221ENST00000520339 FANCAO15360 1455 aa15.17■□□□□ 0.02
CTNNA1-221ENST00000520339 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
CTNNA1-221ENST00000520339 PLCH2O75038 1416 aa15.17■□□□□ 0.02
CTNNA1-221ENST00000520339 ARID4BQ4LE39 1312 aaPredicted RBP15.16■□□□□ 0.02
CTNNA1-221ENST00000520339 EFCAB2Q5VUJ9 269 aa15.14■□□□□ 0.01
CTNNA1-221ENST00000520339 FRMPD1Q5SYB0 1578 aa15.14■□□□□ 0.01
CTNNA1-221ENST00000520339 SCAPERQ9BY12 1400 aa15.12■□□□□ 0.01
CTNNA1-221ENST00000520339 TROQ12816 1431 aaPredicted RBP15.11■□□□□ 0.01
CTNNA1-221ENST00000520339 IFNLR1Q8IU57 520 aaPredicted RBP15.11■□□□□ 0.01
CTNNA1-221ENST00000520339 TTC37Q6PGP7 1564 aa15.11■□□□□ 0.01
CTNNA1-221ENST00000520339 PTPRMP28827 1452 aa15.1■□□□□ 0.01
CTNNA1-221ENST00000520339 CACNB1Q02641 598 aaPredicted RBP15.1■□□□□ 0.01
CTNNA1-221ENST00000520339 SPDYE2BA6NHP3 402 aa15.09■□□□□ 0.01
CTNNA1-221ENST00000520339 SPDYE6P0CI01 402 aa15.09■□□□□ 0.01
CTNNA1-221ENST00000520339 SPDYE2Q495Y8 402 aa15.09■□□□□ 0.01
CTNNA1-221ENST00000520339 HECW2Q9P2P5 1572 aa15.09■□□□□ 0.01
CTNNA1-221ENST00000520339 YEATS2Q9ULM3 1422 aa15.09■□□□□ 0.01
CTNNA1-221ENST00000520339 MAGI2Q86UL8 1455 aa15.08■□□□□ 0.01
CTNNA1-221ENST00000520339 HECW1Q76N89 1606 aa15.08■□□□□ 0
CTNNA1-221ENST00000520339 POGZQ7Z3K3 1410 aa15.08■□□□□ 0
CTNNA1-221ENST00000520339 CASKIN1Q8WXD9 1431 aa15.07■□□□□ 0
CTNNA1-221ENST00000520339 CLIP1P30622 1438 aa15.06■□□□□ 0
CTNNA1-221ENST00000520339 ADAMTSL3P82987 1691 aa15.06■□□□□ 0
CTNNA1-221ENST00000520339 AFAP1Q8N556 730 aa15.05■□□□□ -0
CTNNA1-221ENST00000520339 ZMYM4Q5VZL5 1548 aa15.05■□□□□ -0
CTNNA1-221ENST00000520339 ARHGEF40Q8TER5 1519 aa15.05■□□□□ -0
CTNNA1-221ENST00000520339 CFAP74Q9C0B2 1584 aa15.04■□□□□ -0
CTNNA1-221ENST00000520339 RICTORQ6R327 1708 aa15.03■□□□□ -0
CTNNA1-221ENST00000520339 ZFYVE16Q7Z3T8 1539 aa15.02■□□□□ -0
CTNNA1-221ENST00000520339 MLECQ14165 292 aa15.02■□□□□ -0
CTNNA1-221ENST00000520339 SSUH2Q9Y2M2 353 aa15.02■□□□□ -0
CTNNA1-221ENST00000520339 ATP10AO60312 1499 aa15.01□□□□□ -0.01
CTNNA1-221ENST00000520339 CCDC18Q5T9S5 1454 aa15□□□□□ -0.01
CTNNA1-221ENST00000520339 BCORL1Q5H9F3 1711 aa15□□□□□ -0.01
CTNNA1-221ENST00000520339 KIF14Q15058 1648 aa14.99□□□□□ -0.01
CTNNA1-221ENST00000520339 ARHGAP5Q13017 1502 aa14.97□□□□□ -0.01
CTNNA1-221ENST00000520339 MADDQ8WXG6 1647 aa14.97□□□□□ -0.01
CTNNA1-221ENST00000520339 C9orf84Q5VXU9 1444 aa14.97□□□□□ -0.01
CTNNA1-221ENST00000520339 ZNF518AQ6AHZ1 1483 aa14.96□□□□□ -0.01
CTNNA1-221ENST00000520339 FYCO1Q9BQS8 1478 aa14.96□□□□□ -0.01
CTNNA1-221ENST00000520339 PCF11O94913 1555 aaKnown RBP14.95□□□□□ -0.02
CTNNA1-221ENST00000520339 TRAPPC8Q9Y2L5 1435 aa14.95□□□□□ -0.02
CTNNA1-221ENST00000520339 MYT1LQ9UL68 1186 aa14.95□□□□□ -0.02
CTNNA1-221ENST00000520339 ARHGEF12Q9NZN5 1544 aa14.94□□□□□ -0.02
CTNNA1-221ENST00000520339 STAG3Q9UJ98 1225 aa14.94□□□□□ -0.02
CTNNA1-221ENST00000520339 LMTK3Q96Q04 1460 aa14.94□□□□□ -0.02
CTNNA1-221ENST00000520339 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
CTNNA1-221ENST00000520339 MLH3Q9UHC1 1453 aa14.93□□□□□ -0.02
CTNNA1-221ENST00000520339 HSPA2P54652 639 aa14.92□□□□□ -0.02
CTNNA1-221ENST00000520339 KDM5CP41229 1560 aa14.91□□□□□ -0.02
CTNNA1-221ENST00000520339 CEBPAP49715 358 aaPredicted RBP14.91□□□□□ -0.02
CTNNA1-221ENST00000520339 ZNF777Q9ULD5 760 aaPredicted RBP14.91□□□□□ -0.02
CTNNA1-221ENST00000520339 SIGLEC1Q9BZZ2 1709 aa14.91□□□□□ -0.02
CTNNA1-221ENST00000520339 MYO5CQ9NQX4 1742 aa14.91□□□□□ -0.02
CTNNA1-221ENST00000520339 GPATCH8Q9UKJ3 1502 aaKnown RBP14.91□□□□□ -0.02
CTNNA1-221ENST00000520339 LRRIQ1Q96JM4 1722 aa14.9□□□□□ -0.02
CTNNA1-221ENST00000520339 HNRNPMP52272 730 aaKnown RBP eCLIP14.89□□□□□ -0.037e-14■■■■■ 45.2
CTNNA1-221ENST00000520339 CFDP1Q9UEE9 299 aaPredicted RBP14.89□□□□□ -0.03
CTNNA1-221ENST00000520339 RIMS1Q86UR5 1692 aaKnown RBP14.87□□□□□ -0.03
CTNNA1-221ENST00000520339 ABCC1P33527 1531 aa14.87□□□□□ -0.03
CTNNA1-221ENST00000520339 MTUS2Q5JR59 1369 aa14.86□□□□□ -0.03
CTNNA1-221ENST00000520339 PLCD3Q8N3E9 789 aa14.86□□□□□ -0.03
CTNNA1-221ENST00000520339 SPAG9O60271 1321 aaKnown RBP14.86□□□□□ -0.03
CTNNA1-221ENST00000520339 CCNB3Q8WWL7 1395 aa14.85□□□□□ -0.03
CTNNA1-221ENST00000520339 KIAA1107Q9UPP5 1409 aa14.85□□□□□ -0.03
CTNNA1-221ENST00000520339 DIP2CQ9Y2E4 1556 aa14.85□□□□□ -0.03
CTNNA1-221ENST00000520339 PREX2Q70Z35 1606 aa14.84□□□□□ -0.03
CTNNA1-221ENST00000520339 CEP162Q5TB80 1403 aa14.84□□□□□ -0.03
CTNNA1-221ENST00000520339 CDC42BPBQ9Y5S2 1711 aa14.84□□□□□ -0.03
CTNNA1-221ENST00000520339 FBXO41Q8TF61 875 aa14.84□□□□□ -0.03
CTNNA1-221ENST00000520339 AGLP35573 1532 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms