RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 NLRP13Q86W25 1043 aa27.2■■□□□ 1.94
CHKB-CPT1B-203ENST00000492556 UACAQ9BZF9 1416 aa27.18■■□□□ 1.94
CHKB-CPT1B-203ENST00000492556 IGF1RP08069 1367 aa27.17■■□□□ 1.94
CHKB-CPT1B-203ENST00000492556 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
CHKB-CPT1B-203ENST00000492556 PDE4AP27815 886 aa27.16■■□□□ 1.94
CHKB-CPT1B-203ENST00000492556 KIF15Q9NS87 1388 aa27.16■■□□□ 1.94
CHKB-CPT1B-203ENST00000492556 FGD6Q6ZV73 1430 aa27.14■■□□□ 1.94
CHKB-CPT1B-203ENST00000492556 TDRD9Q8NDG6 1382 aaKnown RBP27.14■■□□□ 1.93
CHKB-CPT1B-203ENST00000492556 MYBBP1AQ9BQG0 1328 aaKnown RBP27.13■■□□□ 1.93
CHKB-CPT1B-203ENST00000492556 CNTLNQ9NXG0 1405 aa27.13■■□□□ 1.93
CHKB-CPT1B-203ENST00000492556 NUP155O75694 1391 aa27.13■■□□□ 1.93
CHKB-CPT1B-203ENST00000492556 ANKRD30AQ9BXX3 1397 aa27.12■■□□□ 1.93
CHKB-CPT1B-203ENST00000492556 RRP1P56182 461 aaKnown RBP27.12■■□□□ 1.93
CHKB-CPT1B-203ENST00000492556 CCDC7Q96M83 1385 aa27.11■■□□□ 1.93
CHKB-CPT1B-203ENST00000492556 MS4A1P11836 297 aa27.11■■□□□ 1.93
CHKB-CPT1B-203ENST00000492556 EXOC6Q8TAG9 804 aa27.09■■□□□ 1.93
CHKB-CPT1B-203ENST00000492556 STAG3Q9UJ98 1225 aa27.08■■□□□ 1.93
CHKB-CPT1B-203ENST00000492556 WASHC2AQ641Q2 1341 aa27.08■■□□□ 1.93
CHKB-CPT1B-203ENST00000492556 PRXQ9BXM0 1461 aa27.06■■□□□ 1.92
CHKB-CPT1B-203ENST00000492556 NCLP19338 710 aaKnown RBP27.06■■□□□ 1.92
CHKB-CPT1B-203ENST00000492556 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.05■■□□□ 1.92
CHKB-CPT1B-203ENST00000492556 HSCBQ8IWL3 235 aa27.03■■□□□ 1.92
CHKB-CPT1B-203ENST00000492556 USP47Q96K76 1375 aa27.03■■□□□ 1.92
CHKB-CPT1B-203ENST00000492556 HSP90AB1P08238 724 aaKnown RBP27.01■■□□□ 1.92
CHKB-CPT1B-203ENST00000492556 KIF7Q2M1P5 1343 aa27.01■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 GOLGA2Q08379 1002 aa27.01■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 MAPK8IP3Q9UPT6 1336 aa27■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 WDR97A6NE52 1622 aa27■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 TNNT2P45379 298 aaPredicted RBP27■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 MYOM3Q5VTT5 1437 aa27■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 ST20-MTHFSA0A0A6YYL1 179 aa26.99■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 SLKQ9H2G2 1235 aaPredicted RBP26.98■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 GSE1Q14687 1217 aa26.98■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 ARID4BQ4LE39 1312 aaPredicted RBP26.97■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 CUX1P39880 1505 aa26.97■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 CENPQQ7L2Z9 268 aaPredicted RBP26.96■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 SPRYD3Q8NCJ5 442 aa26.95■■□□□ 1.91
CHKB-CPT1B-203ENST00000492556 CHMP4BQ9H444 224 aaKnown RBP26.94■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 CASKIN1Q8WXD9 1431 aa26.94■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 FAM161AQ3B820 660 aa26.93■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 NPM1P06748 294 aaKnown RBP eCLIP26.93■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 CASC1Q6TDU7 716 aa26.92■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 PLIN1O60240 522 aa26.92■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 FGD5Q6ZNL6 1462 aa26.92■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 TOP2BQ02880 1626 aa26.92■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 CRBNQ96SW2 442 aa26.9■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 RWDD1Q9H446 243 aaPredicted RBP26.9■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 PTMAP06454 111 aaKnown RBP26.9■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 MORC1Q86VD1 984 aa26.9■■□□□ 1.9
CHKB-CPT1B-203ENST00000492556 PMFBP1Q8TBY8 1022 aa26.88■■□□□ 1.89
CHKB-CPT1B-203ENST00000492556 TIAM1Q13009 1591 aa26.88■■□□□ 1.89
CHKB-CPT1B-203ENST00000492556 SLC4A3P48751 1232 aa26.87■■□□□ 1.89
CHKB-CPT1B-203ENST00000492556 PDS5BQ9NTI5 1447 aa26.86■■□□□ 1.89
CHKB-CPT1B-203ENST00000492556 PNNQ9H307 717 aaKnown RBP26.86■■□□□ 1.89
CHKB-CPT1B-203ENST00000492556 FYCO1Q9BQS8 1478 aa26.86■■□□□ 1.89
CHKB-CPT1B-203ENST00000492556 U2SURPO15042 1029 aaKnown RBP26.84■■□□□ 1.89
CHKB-CPT1B-203ENST00000492556 GOLGA6L3A6NEY3 463 aa26.84■■□□□ 1.89
CHKB-CPT1B-203ENST00000492556 GZF1Q9H116 711 aaPredicted RBP26.83■■□□□ 1.89
CHKB-CPT1B-203ENST00000492556 NCOA2Q15596 1464 aa26.83■■□□□ 1.89
CHKB-CPT1B-203ENST00000492556 MSH5O43196 834 aa26.83■■□□□ 1.89
CHKB-CPT1B-203ENST00000492556 CARMIL2Q6F5E8 1435 aa26.83■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 PANK3Q9H999 370 aa26.81■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 PAK3O75914 559 aaPredicted RBP26.8■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 DNTTIP2Q5QJE6 756 aaKnown RBP26.79■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 ESF1Q9H501 851 aaKnown RBP26.79■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 GBP4Q96PP9 640 aa26.79■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 HFM1A2PYH4 1435 aa26.79■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 CENPJQ9HC77 1338 aaPredicted RBP26.78■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 CCDC146Q8IYE0 955 aa26.78■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 PTMSP20962 102 aa26.77■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 KANK1Q14678 1352 aa26.77■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 RSPH6AQ9H0K4 717 aa26.77■■□□□ 1.88
CHKB-CPT1B-203ENST00000492556 MSNP26038 577 aaKnown RBP26.76■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 SENP3Q9H4L4 574 aaPredicted RBP26.76■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.74■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 BRD4O60885 1362 aaPredicted RBP26.74■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 HNRNPMP52272 730 aaKnown RBP eCLIP26.73■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 AKNAQ7Z591 1439 aa26.73■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 CCDC184Q52MB2 194 aa26.72■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 SMG6Q86US8 1419 aaKnown RBP26.72■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 IPO8O15397 1037 aaKnown RBP26.72■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 EIF3AQ14152 1382 aaKnown RBP26.72■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 NCAPD3P42695 1498 aa26.71■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 CCDC144AA2RUR9 1427 aa26.71■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 MFAP1P55081 439 aaKnown RBP26.7■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 RSPH4AQ5TD94 716 aa26.7■■□□□ 1.87
CHKB-CPT1B-203ENST00000492556 CFAP44Q96MT7 982 aa26.69■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 NFKBIBQ15653 356 aa26.68■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 ITPRIPQ8IWB1 547 aa26.67■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 CGNL1Q0VF96 1302 aa26.67■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 U2AF1L5P0DN76 240 aaPredicted RBP26.66■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 U2AF1Q01081 240 aaKnown RBP eCLIP26.66■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 EFCAB5A4FU69 1503 aa26.66■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 E9PSI1 815 aa26.66■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 MIA2Q96PC5 1412 aa26.65■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 POGKQ9P215 609 aa26.64■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 CLUAP1Q96AJ1 413 aa26.64■■□□□ 1.86
CHKB-CPT1B-203ENST00000492556 CFTRP13569 1480 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms