RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 CARMIL2Q6F5E8 1435 aa13.87□□□□□ -0.19
BRD9-209ENST00000490814 FGD6Q6ZV73 1430 aa13.87□□□□□ -0.19
BRD9-209ENST00000490814 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
BRD9-209ENST00000490814 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
BRD9-209ENST00000490814 MAP3K1Q13233 1512 aa13.86□□□□□ -0.19
BRD9-209ENST00000490814 ADAMTS12P58397 1594 aa13.85□□□□□ -0.19
BRD9-209ENST00000490814 EIF4G2P78344 907 aaKnown RBP eCLIP13.85□□□□□ -0.194e-8■■■■■ 75.7
BRD9-209ENST00000490814 ZNF326Q5BKZ1 582 aaKnown RBP13.85□□□□□ -0.19
BRD9-209ENST00000490814 B4GALNT3Q6L9W6 998 aa13.84□□□□□ -0.19
BRD9-209ENST00000490814 MRS2Q9HD23 443 aa13.84□□□□□ -0.19
BRD9-209ENST00000490814 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.19
BRD9-209ENST00000490814 KIAA0586Q9BVV6 1533 aa13.83□□□□□ -0.2
BRD9-209ENST00000490814 CHD1O14646 1710 aa13.83□□□□□ -0.2
BRD9-209ENST00000490814 FMN1Q68DA7 1419 aa13.83□□□□□ -0.2
BRD9-209ENST00000490814 PTPRKQ15262 1439 aa13.82□□□□□ -0.2
BRD9-209ENST00000490814 CCDC184Q52MB2 194 aa13.81□□□□□ -0.2
BRD9-209ENST00000490814 FYCO1Q9BQS8 1478 aa13.81□□□□□ -0.2
BRD9-209ENST00000490814 CEP170Q5SW79 1584 aa13.81□□□□□ -0.2
BRD9-209ENST00000490814 WASHC2AQ641Q2 1341 aa13.8□□□□□ -0.2
BRD9-209ENST00000490814 UACAQ9BZF9 1416 aa13.8□□□□□ -0.2
BRD9-209ENST00000490814 PPP4R2Q9NY27 417 aa13.8□□□□□ -0.2
BRD9-209ENST00000490814 PLEKHD1A6NEE1 506 aa13.8□□□□□ -0.2
BRD9-209ENST00000490814 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
BRD9-209ENST00000490814 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
BRD9-209ENST00000490814 ERCC6L2Q5T890 1561 aa13.78□□□□□ -0.2
BRD9-209ENST00000490814 CUL7Q14999 1698 aa13.77□□□□□ -0.2
BRD9-209ENST00000490814 NUP160Q12769 1436 aa13.77□□□□□ -0.2
BRD9-209ENST00000490814 RTL5Q5HYW3 569 aaPredicted RBP13.77□□□□□ -0.21
BRD9-209ENST00000490814 HFM1A2PYH4 1435 aa13.77□□□□□ -0.21
BRD9-209ENST00000490814 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
BRD9-209ENST00000490814 MPHOSPH9Q99550 1183 aa13.76□□□□□ -0.21
BRD9-209ENST00000490814 NAIPQ13075 1403 aa13.76□□□□□ -0.21
BRD9-209ENST00000490814 GLIPR1L2Q4G1C9 344 aa13.76□□□□□ -0.21
BRD9-209ENST00000490814 NOP58Q9Y2X3 529 aaKnown RBP13.76□□□□□ -0.21
BRD9-209ENST00000490814 PLB1Q6P1J6 1458 aa13.76□□□□□ -0.21
BRD9-209ENST00000490814 IQGAP2Q13576 1575 aa13.75□□□□□ -0.21
BRD9-209ENST00000490814 FAM69CQ0P6D2 419 aa13.75□□□□□ -0.21
BRD9-209ENST00000490814 MYOM3Q5VTT5 1437 aa13.75□□□□□ -0.21
BRD9-209ENST00000490814 CFAP43Q8NDM7 1665 aa13.74□□□□□ -0.21
BRD9-209ENST00000490814 SLC4A1APQ9BWU0 796 aaKnown RBP13.73□□□□□ -0.21
BRD9-209ENST00000490814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.212e-9■■□□□ 11.7
BRD9-209ENST00000490814 C11orf95C9JLR9 678 aaPredicted RBP13.72□□□□□ -0.21
BRD9-209ENST00000490814 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
BRD9-209ENST00000490814 EFCAB5A4FU69 1503 aa13.71□□□□□ -0.21
BRD9-209ENST00000490814 PRKRIP1Q9H875 184 aaPredicted RBP13.7□□□□□ -0.22
BRD9-209ENST00000490814 ARHGEF11O15085 1522 aa13.7□□□□□ -0.22
BRD9-209ENST00000490814 PTPN23Q9H3S7 1636 aa13.69□□□□□ -0.22
BRD9-209ENST00000490814 ZMYND15Q9H091 742 aa13.69□□□□□ -0.22
BRD9-209ENST00000490814 ANP32AP39687 249 aaKnown RBP13.68□□□□□ -0.22
BRD9-209ENST00000490814 NBPF8Q3BBV2 869 aa13.67□□□□□ -0.22
BRD9-209ENST00000490814 ZNF644Q9H582 1327 aaPredicted RBP13.66□□□□□ -0.22
BRD9-209ENST00000490814 ZBTB47Q9UFB7 747 aaPredicted RBP13.66□□□□□ -0.22
BRD9-209ENST00000490814 VSIG10Q8N0Z9 540 aa13.65□□□□□ -0.22
BRD9-209ENST00000490814 DISP1Q96F81 1524 aa13.65□□□□□ -0.22
BRD9-209ENST00000490814 NPM2Q86SE8 214 aaKnown RBP13.65□□□□□ -0.23
BRD9-209ENST00000490814 CCDC7Q96M83 1385 aa13.64□□□□□ -0.23
BRD9-209ENST00000490814 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
BRD9-209ENST00000490814 KIF7Q2M1P5 1343 aa13.62□□□□□ -0.23
BRD9-209ENST00000490814 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
BRD9-209ENST00000490814 CFDP1Q9UEE9 299 aaPredicted RBP13.6□□□□□ -0.23
BRD9-209ENST00000490814 CDK13Q14004 1512 aaKnown RBP13.6□□□□□ -0.23
BRD9-209ENST00000490814 TMC1Q8TDI8 760 aa13.59□□□□□ -0.23
BRD9-209ENST00000490814 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
BRD9-209ENST00000490814 RSPH6AQ9H0K4 717 aa13.59□□□□□ -0.23
BRD9-209ENST00000490814 ZBED9Q6R2W3 1325 aa13.59□□□□□ -0.23
BRD9-209ENST00000490814 EHBP1L1Q8N3D4 1523 aa13.58□□□□□ -0.23
BRD9-209ENST00000490814 SENP3Q9H4L4 574 aaPredicted RBP13.58□□□□□ -0.24
BRD9-209ENST00000490814 IPO9Q96P70 1041 aaKnown RBP13.58□□□□□ -0.24
BRD9-209ENST00000490814 CTTNBP2Q8WZ74 1663 aa13.57□□□□□ -0.24
BRD9-209ENST00000490814 A0A0U1RQG5 324 aaPredicted RBP13.56□□□□□ -0.24
BRD9-209ENST00000490814 RIMBP3CA6NJZ7 1639 aa13.56□□□□□ -0.24
BRD9-209ENST00000490814 RIMBP3BA6NNM3 1639 aa13.56□□□□□ -0.24
BRD9-209ENST00000490814 RIMBP3Q9UFD9 1639 aa13.56□□□□□ -0.24
BRD9-209ENST00000490814 CLASP1Q7Z460 1538 aa13.56□□□□□ -0.24
BRD9-209ENST00000490814 LAS1LQ9Y4W2 734 aaKnown RBP13.55□□□□□ -0.24
BRD9-209ENST00000490814 HNRNPMP52272 730 aaKnown RBP eCLIP13.55□□□□□ -0.245e-7■■■■□ 21.2
BRD9-209ENST00000490814 UGGT2Q9NYU1 1516 aa13.55□□□□□ -0.24
BRD9-209ENST00000490814 MAGI3Q5TCQ9 1506 aa13.55□□□□□ -0.24
BRD9-209ENST00000490814 KIAA0556O60303 1618 aa13.54□□□□□ -0.24
BRD9-209ENST00000490814 PKD2Q13563 968 aa13.54□□□□□ -0.24
BRD9-209ENST00000490814 AKNAQ7Z591 1439 aa13.54□□□□□ -0.24
BRD9-209ENST00000490814 KDM6BO15054 1643 aa13.53□□□□□ -0.24
BRD9-209ENST00000490814 NCOA1Q15788 1441 aa13.53□□□□□ -0.24
BRD9-209ENST00000490814 KDM5BQ9UGL1 1544 aa13.53□□□□□ -0.24
BRD9-209ENST00000490814 MLECQ14165 292 aa13.52□□□□□ -0.24
BRD9-209ENST00000490814 RAPGEF3O95398 923 aa13.52□□□□□ -0.25
BRD9-209ENST00000490814 PDE4CQ08493 712 aa13.52□□□□□ -0.25
BRD9-209ENST00000490814 EPRSP07814 1512 aaKnown RBP13.52□□□□□ -0.25
BRD9-209ENST00000490814 CARD11Q9BXL7 1154 aa13.52□□□□□ -0.25
BRD9-209ENST00000490814 ATP10BO94823 1461 aa13.51□□□□□ -0.25
BRD9-209ENST00000490814 ANKRD30BQ9BXX2 1392 aa13.51□□□□□ -0.25
BRD9-209ENST00000490814 NEFMP07197 916 aa13.5□□□□□ -0.25
BRD9-209ENST00000490814 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
BRD9-209ENST00000490814 DENND4BO75064 1496 aaPredicted RBP13.5□□□□□ -0.25
BRD9-209ENST00000490814 ASXL2Q76L83 1435 aa13.5□□□□□ -0.25
BRD9-209ENST00000490814 USP47Q96K76 1375 aa13.49□□□□□ -0.25
BRD9-209ENST00000490814 BRPF3Q9ULD4 1205 aa13.49□□□□□ -0.25
BRD9-209ENST00000490814 ARID4BQ4LE39 1312 aaPredicted RBP13.49□□□□□ -0.25
BRD9-209ENST00000490814 NUP153P49790 1475 aaKnown RBP13.49□□□□□ -0.25
BRD9-209ENST00000490814 AFAP1Q8N556 730 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms