RNA–Protein interactions for RNA: ENST00000468608.1

PARP1-205, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3

Gene PARP1, Length 438 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-205ENST00000468608 KDM4FA0A1W2PPD8 638 aa8.82□□□□□ -1
PARP1-205ENST00000468608 GLI2P10070 1586 aa8.82□□□□□ -1
PARP1-205ENST00000468608 NUP153P49790 1475 aaKnown RBP8.81□□□□□ -1
PARP1-205ENST00000468608 CLIP1P30622 1438 aa8.8□□□□□ -1
PARP1-205ENST00000468608 EPRSP07814 1512 aaKnown RBP8.8□□□□□ -1
PARP1-205ENST00000468608 PLEKHD1A6NEE1 506 aa8.8□□□□□ -1
PARP1-205ENST00000468608 ZCCHC11Q5TAX3 1644 aaKnown RBP8.79□□□□□ -1
PARP1-205ENST00000468608 EFCAB5A4FU69 1503 aa8.79□□□□□ -1
PARP1-205ENST00000468608 COL17A1Q9UMD9 1497 aaPredicted RBP8.77□□□□□ -1
PARP1-205ENST00000468608 WDR7Q9Y4E6 1490 aa8.77□□□□□ -1
PARP1-205ENST00000468608 SPDYE2BA6NHP3 402 aa8.77□□□□□ -1.01
PARP1-205ENST00000468608 SPDYE6P0CI01 402 aa8.77□□□□□ -1.01
PARP1-205ENST00000468608 SPDYE2Q495Y8 402 aa8.77□□□□□ -1.01
PARP1-205ENST00000468608 FMN1Q68DA7 1419 aa8.77□□□□□ -1.01
PARP1-205ENST00000468608 TEX14Q8IWB6 1497 aa8.77□□□□□ -1.01
PARP1-205ENST00000468608 PPRC1Q5VV67 1664 aaKnown RBP8.76□□□□□ -1.01
PARP1-205ENST00000468608 ZNF692Q9BU19 519 aaPredicted RBP8.76□□□□□ -1.01
PARP1-205ENST00000468608 CEP162Q5TB80 1403 aa8.76□□□□□ -1.01
PARP1-205ENST00000468608 CD109Q6YHK3 1445 aa8.76□□□□□ -1.01
PARP1-205ENST00000468608 VASPP50552 380 aaPredicted RBP8.75□□□□□ -1.01
PARP1-205ENST00000468608 MAP3K4Q9Y6R4 1608 aa8.75□□□□□ -1.01
PARP1-205ENST00000468608 RAPGEF6Q8TEU7 1601 aa8.74□□□□□ -1.01
PARP1-205ENST00000468608 CASKIN1Q8WXD9 1431 aa8.73□□□□□ -1.01
PARP1-205ENST00000468608 CDK13Q14004 1512 aaKnown RBP8.73□□□□□ -1.01
PARP1-205ENST00000468608 MAGI3Q5TCQ9 1506 aa8.72□□□□□ -1.01
PARP1-205ENST00000468608 CDK11AQ9UQ88 783 aaPredicted RBP8.72□□□□□ -1.01
PARP1-205ENST00000468608 SSUH2Q9Y2M2 353 aa8.72□□□□□ -1.01
PARP1-205ENST00000468608 CFAP43Q8NDM7 1665 aa8.69□□□□□ -1.02
PARP1-205ENST00000468608 RAPGEF3O95398 923 aa8.68□□□□□ -1.02
PARP1-205ENST00000468608 KANK4Q5T7N3 995 aaPredicted RBP8.68□□□□□ -1.02
PARP1-205ENST00000468608 PHLDB1Q86UU1 1377 aa8.68□□□□□ -1.02
PARP1-205ENST00000468608 ADGRL1O94910 1474 aa8.68□□□□□ -1.02
PARP1-205ENST00000468608 TROQ12816 1431 aaPredicted RBP8.67□□□□□ -1.02
PARP1-205ENST00000468608 ARAP3Q8WWN8 1544 aa8.66□□□□□ -1.02
PARP1-205ENST00000468608 PLCH2O75038 1416 aa8.65□□□□□ -1.02
PARP1-205ENST00000468608 EFCAB2Q5VUJ9 269 aa8.65□□□□□ -1.02
PARP1-205ENST00000468608 PCF11O94913 1555 aaKnown RBP8.65□□□□□ -1.03
PARP1-205ENST00000468608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.64□□□□□ -1.03
PARP1-205ENST00000468608 FYCO1Q9BQS8 1478 aa8.64□□□□□ -1.03
PARP1-205ENST00000468608 VPS8Q8N3P4 1428 aa8.64□□□□□ -1.03
PARP1-205ENST00000468608 IFNLR1Q8IU57 520 aaPredicted RBP8.64□□□□□ -1.03
PARP1-205ENST00000468608 STAG3Q9UJ98 1225 aa8.64□□□□□ -1.03
PARP1-205ENST00000468608 HECW1Q76N89 1606 aa8.64□□□□□ -1.03
PARP1-205ENST00000468608 ABCA9Q8IUA7 1624 aa8.64□□□□□ -1.03
PARP1-205ENST00000468608 AKNAQ7Z591 1439 aa8.63□□□□□ -1.03
PARP1-205ENST00000468608 AFAP1Q8N556 730 aa8.62□□□□□ -1.03
PARP1-205ENST00000468608 CCDC18Q5T9S5 1454 aa8.62□□□□□ -1.03
PARP1-205ENST00000468608 NEO1Q92859 1461 aa8.62□□□□□ -1.03
PARP1-205ENST00000468608 ARID4BQ4LE39 1312 aaPredicted RBP8.61□□□□□ -1.03
PARP1-205ENST00000468608 ZNF644Q9H582 1327 aaPredicted RBP8.61□□□□□ -1.03
PARP1-205ENST00000468608 ZNF777Q9ULD5 760 aaPredicted RBP8.61□□□□□ -1.03
PARP1-205ENST00000468608 MTUS2Q5JR59 1369 aa8.61□□□□□ -1.03
PARP1-205ENST00000468608 FANCAO15360 1455 aa8.6□□□□□ -1.03
PARP1-205ENST00000468608 HNRNPMP52272 730 aaKnown RBP eCLIP8.6□□□□□ -1.03
PARP1-205ENST00000468608 SCAPERQ9BY12 1400 aa8.6□□□□□ -1.03
PARP1-205ENST00000468608 GPATCH8Q9UKJ3 1502 aaKnown RBP8.59□□□□□ -1.03
PARP1-205ENST00000468608 KIF14Q15058 1648 aa8.59□□□□□ -1.03
PARP1-205ENST00000468608 CFDP1Q9UEE9 299 aaPredicted RBP8.59□□□□□ -1.03
PARP1-205ENST00000468608 TTC37Q6PGP7 1564 aa8.59□□□□□ -1.03
PARP1-205ENST00000468608 LRRIQ1Q96JM4 1722 aa8.59□□□□□ -1.03
PARP1-205ENST00000468608 CCNB3Q8WWL7 1395 aa8.58□□□□□ -1.04
PARP1-205ENST00000468608 DENND4BO75064 1496 aaPredicted RBP8.57□□□□□ -1.04
PARP1-205ENST00000468608 PPARGC1BQ86YN6 1023 aaKnown RBP8.57□□□□□ -1.04
PARP1-205ENST00000468608 TRAPPC8Q9Y2L5 1435 aa8.56□□□□□ -1.04
PARP1-205ENST00000468608 ARHGEF12Q9NZN5 1544 aa8.56□□□□□ -1.04
PARP1-205ENST00000468608 LRRC9Q6ZRR7 1453 aa8.56□□□□□ -1.04
PARP1-205ENST00000468608 HECW2Q9P2P5 1572 aa8.54□□□□□ -1.04
PARP1-205ENST00000468608 NCOA2Q15596 1464 aa8.54□□□□□ -1.04
PARP1-205ENST00000468608 ILDR1Q86SU0 546 aaPredicted RBP8.54□□□□□ -1.04
PARP1-205ENST00000468608 RBM42Q9BTD8 480 aaKnown RBP8.54□□□□□ -1.04
PARP1-205ENST00000468608 ARHGAP5Q13017 1502 aa8.54□□□□□ -1.04
PARP1-205ENST00000468608 MAP3K1Q13233 1512 aa8.54□□□□□ -1.04
PARP1-205ENST00000468608 YEATS2Q9ULM3 1422 aa8.54□□□□□ -1.04
PARP1-205ENST00000468608 PTPRMP28827 1452 aa8.53□□□□□ -1.04
PARP1-205ENST00000468608 SLC24A1O60721 1099 aa8.53□□□□□ -1.04
PARP1-205ENST00000468608 KLHL34Q8N239 644 aa8.53□□□□□ -1.04
PARP1-205ENST00000468608 PLCD3Q8N3E9 789 aa8.53□□□□□ -1.04
PARP1-205ENST00000468608 TIAM1Q13009 1591 aa8.52□□□□□ -1.04
PARP1-205ENST00000468608 MLECQ14165 292 aa8.52□□□□□ -1.05
PARP1-205ENST00000468608 MYT1LQ9UL68 1186 aa8.52□□□□□ -1.05
PARP1-205ENST00000468608 POGZQ7Z3K3 1410 aa8.52□□□□□ -1.05
PARP1-205ENST00000468608 ADAMTSL3P82987 1691 aa8.52□□□□□ -1.05
PARP1-205ENST00000468608 FRMPD1Q5SYB0 1578 aa8.52□□□□□ -1.05
PARP1-205ENST00000468608 SPOCK2Q92563 424 aa8.51□□□□□ -1.05
PARP1-205ENST00000468608 KIAA1107Q9UPP5 1409 aa8.51□□□□□ -1.05
PARP1-205ENST00000468608 CFAP74Q9C0B2 1584 aa8.51□□□□□ -1.05
PARP1-205ENST00000468608 RICTORQ6R327 1708 aa8.51□□□□□ -1.05
PARP1-205ENST00000468608 MAGI2Q86UL8 1455 aa8.51□□□□□ -1.05
PARP1-205ENST00000468608 MBD5Q9P267 1494 aa8.51□□□□□ -1.05
PARP1-205ENST00000468608 EHBP1L1Q8N3D4 1523 aa8.5□□□□□ -1.05
PARP1-205ENST00000468608 BCORL1Q5H9F3 1711 aa8.5□□□□□ -1.05
PARP1-205ENST00000468608 MIER1Q8N108 512 aa8.5□□□□□ -1.05
PARP1-205ENST00000468608 SPAG9O60271 1321 aaKnown RBP8.5□□□□□ -1.05
PARP1-205ENST00000468608 PLEKHG5O94827 1062 aa8.48□□□□□ -1.05
PARP1-205ENST00000468608 RSPH4AQ5TD94 716 aa8.48□□□□□ -1.05
PARP1-205ENST00000468608 AKT1S1Q96B36 256 aa8.48□□□□□ -1.05
PARP1-205ENST00000468608 ATP10AO60312 1499 aa8.48□□□□□ -1.05
PARP1-205ENST00000468608 ZFYVE16Q7Z3T8 1539 aa8.48□□□□□ -1.05
PARP1-205ENST00000468608 MLH3Q9UHC1 1453 aa8.47□□□□□ -1.05
PARP1-205ENST00000468608 MYO5CQ9NQX4 1742 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms