RNA–Protein interactions for RNA: ENST00000468608.1

PARP1-205, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3

Gene PARP1, Length 438 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-205ENST00000468608 AEBP2Q6ZN18 517 aaPredicted RBP15.1■□□□□ 0.01
PARP1-205ENST00000468608 CHIC1Q5VXU3 224 aa15.05■□□□□ -0
PARP1-205ENST00000468608 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
PARP1-205ENST00000468608 NISCHQ9Y2I1 1504 aa13.16□□□□□ -0.3
PARP1-205ENST00000468608 SENP3Q9H4L4 574 aaPredicted RBP12.81□□□□□ -0.36
PARP1-205ENST00000468608 PLPPR3Q6T4P5 718 aa12.37□□□□□ -0.43
PARP1-205ENST00000468608 FOXD1Q16676 465 aa11.83□□□□□ -0.52
PARP1-205ENST00000468608 ABCC9O60706 1549 aa11.62□□□□□ -0.55
PARP1-205ENST00000468608 ADRA2BP18089 450 aa11.59□□□□□ -0.55
PARP1-205ENST00000468608 PPP6R1Q9UPN7 881 aa11.58□□□□□ -0.56
PARP1-205ENST00000468608 CCDC180Q9P1Z9 1646 aa11.56□□□□□ -0.56
PARP1-205ENST00000468608 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
PARP1-205ENST00000468608 DCAF8L2P0C7V8 631 aa11.14□□□□□ -0.63
PARP1-205ENST00000468608 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
PARP1-205ENST00000468608 NACADO15069 1562 aa10.98□□□□□ -0.65
PARP1-205ENST00000468608 KCNA4P22459 653 aa10.96□□□□□ -0.65
PARP1-205ENST00000468608 DNAJC5BQ9UF47 199 aa10.94□□□□□ -0.66
PARP1-205ENST00000468608 ZCCHC6Q5VYS8 1495 aaKnown RBP10.93□□□□□ -0.66
PARP1-205ENST00000468608 PPP4R3CPQ6ZMV5 832 aa10.92□□□□□ -0.66
PARP1-205ENST00000468608 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
PARP1-205ENST00000468608 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
PARP1-205ENST00000468608 MSH5O43196 834 aa10.83□□□□□ -0.68
PARP1-205ENST00000468608 DCAF1Q9Y4B6 1507 aa10.83□□□□□ -0.68
PARP1-205ENST00000468608 UNC13AQ9UPW8 1703 aa10.76□□□□□ -0.69
PARP1-205ENST00000468608 NCBP3Q53F19 620 aaKnown RBP10.74□□□□□ -0.69
PARP1-205ENST00000468608 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
PARP1-205ENST00000468608 SCAF1Q9H7N4 1312 aaKnown RBP10.66□□□□□ -0.7
PARP1-205ENST00000468608 SCRIBQ14160 1630 aa10.61□□□□□ -0.71
PARP1-205ENST00000468608 CNKSR2Q8WXI2 1034 aa10.57□□□□□ -0.72
PARP1-205ENST00000468608 NPM3O75607 178 aaKnown RBP10.55□□□□□ -0.72
PARP1-205ENST00000468608 SHROOM4Q9ULL8 1493 aa10.54□□□□□ -0.72
PARP1-205ENST00000468608 SLC4A1APQ9BWU0 796 aaKnown RBP10.51□□□□□ -0.73
PARP1-205ENST00000468608 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
PARP1-205ENST00000468608 CC2D2AQ9P2K1 1620 aa10.47□□□□□ -0.73
PARP1-205ENST00000468608 CECR2Q9BXF3 1484 aa10.46□□□□□ -0.74
PARP1-205ENST00000468608 EIF4G1Q04637 1599 aaKnown RBP10.44□□□□□ -0.74
PARP1-205ENST00000468608 MAPK8IP2Q13387 824 aaPredicted RBP10.42□□□□□ -0.74
PARP1-205ENST00000468608 RNF216Q9NWF9 866 aaPredicted RBP10.29□□□□□ -0.76
PARP1-205ENST00000468608 CSRNP3Q8WYN3 585 aa10.27□□□□□ -0.77
PARP1-205ENST00000468608 DMRT2Q9Y5R5 561 aa10.27□□□□□ -0.77
PARP1-205ENST00000468608 NCAPD3P42695 1498 aa10.17□□□□□ -0.78
PARP1-205ENST00000468608 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
PARP1-205ENST00000468608 HOXD11P31277 338 aaPredicted RBP10.17□□□□□ -0.78
PARP1-205ENST00000468608 MROH2BQ7Z745 1585 aa10.17□□□□□ -0.78
PARP1-205ENST00000468608 BAZ1AQ9NRL2 1556 aaPredicted RBP10.14□□□□□ -0.79
PARP1-205ENST00000468608 SMARCA4P51532 1647 aa10.13□□□□□ -0.79
PARP1-205ENST00000468608 RSF1Q96T23 1441 aaPredicted RBP10.1□□□□□ -0.79
PARP1-205ENST00000468608 ZBTB22O15209 634 aa10.09□□□□□ -0.79
PARP1-205ENST00000468608 SMARCA2P51531 1590 aa10.08□□□□□ -0.8
PARP1-205ENST00000468608 DNAJC5Q9H3Z4 198 aa10.04□□□□□ -0.8
PARP1-205ENST00000468608 FOXD4L1Q9NU39 408 aa10.04□□□□□ -0.8
PARP1-205ENST00000468608 PEG3Q9GZU2 1588 aa10.04□□□□□ -0.8
PARP1-205ENST00000468608 ERCC6Q03468 1493 aa10.04□□□□□ -0.8
PARP1-205ENST00000468608 BAZ1BQ9UIG0 1483 aaKnown RBP10.04□□□□□ -0.8
PARP1-205ENST00000468608 HMGXB3Q12766 1538 aa10.02□□□□□ -0.8
PARP1-205ENST00000468608 WIZO95785 1651 aa9.99□□□□□ -0.81
PARP1-205ENST00000468608 NESP48681 1621 aa9.98□□□□□ -0.81
PARP1-205ENST00000468608 CUX2O14529 1486 aa9.98□□□□□ -0.81
PARP1-205ENST00000468608 SUPT5HO00267 1087 aaKnown RBP9.92□□□□□ -0.82
PARP1-205ENST00000468608 CADPSQ9ULU8 1353 aa9.9□□□□□ -0.82
PARP1-205ENST00000468608 LAMC3Q9Y6N6 1575 aa9.89□□□□□ -0.83
PARP1-205ENST00000468608 SLC4A2P04920 1241 aa9.88□□□□□ -0.83
PARP1-205ENST00000468608 PDS5BQ9NTI5 1447 aa9.88□□□□□ -0.83
PARP1-205ENST00000468608 TOP2AP11388 1531 aaKnown RBP9.87□□□□□ -0.83
PARP1-205ENST00000468608 CCDC88BA6NC98 1476 aa9.86□□□□□ -0.83
PARP1-205ENST00000468608 CFTRP13569 1480 aa9.81□□□□□ -0.84
PARP1-205ENST00000468608 KIF21AQ7Z4S6 1674 aa9.8□□□□□ -0.84
PARP1-205ENST00000468608 THOC2Q8NI27 1593 aaKnown RBP9.8□□□□□ -0.84
PARP1-205ENST00000468608 DCAF8L1A6NGE4 600 aa9.77□□□□□ -0.85
PARP1-205ENST00000468608 MYCNP04198 464 aaPredicted RBP9.77□□□□□ -0.85
PARP1-205ENST00000468608 MRC2Q9UBG0 1479 aa9.75□□□□□ -0.85
PARP1-205ENST00000468608 FANCD2Q9BXW9 1451 aa9.73□□□□□ -0.85
PARP1-205ENST00000468608 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
PARP1-205ENST00000468608 ATXN8OSP0DMR3 200 aa9.7□□□□□ -0.86
PARP1-205ENST00000468608 WDR62O43379 1518 aa9.7□□□□□ -0.86
PARP1-205ENST00000468608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.68□□□□□ -0.86
PARP1-205ENST00000468608 URB2Q14146 1524 aaKnown RBP9.65□□□□□ -0.86
PARP1-205ENST00000468608 OSCARQ8IYS5 282 aa9.64□□□□□ -0.87
PARP1-205ENST00000468608 TRIM41Q8WV44 630 aa9.61□□□□□ -0.87
PARP1-205ENST00000468608 TOPBP1Q92547 1522 aa9.57□□□□□ -0.88
PARP1-205ENST00000468608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.57□□□□□ -0.88
PARP1-205ENST00000468608 HNRNPUL2Q1KMD3 747 aaKnown RBP9.57□□□□□ -0.88
PARP1-205ENST00000468608 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
PARP1-205ENST00000468608 ABCC8Q09428 1581 aa9.55□□□□□ -0.88
PARP1-205ENST00000468608 U3KPZ7 1027 aaPredicted RBP9.55□□□□□ -0.88
PARP1-205ENST00000468608 SAMD1Q6SPF0 538 aaPredicted RBP9.54□□□□□ -0.88
PARP1-205ENST00000468608 IFT140Q96RY7 1462 aa9.53□□□□□ -0.88
PARP1-205ENST00000468608 RAD54L2Q9Y4B4 1467 aa9.53□□□□□ -0.88
PARP1-205ENST00000468608 ZNF608Q9ULD9 1512 aaPredicted RBP9.52□□□□□ -0.88
PARP1-205ENST00000468608 SOGA1O94964 1423 aa9.52□□□□□ -0.89
PARP1-205ENST00000468608 CUX1P39880 1505 aa9.51□□□□□ -0.89
PARP1-205ENST00000468608 POLA1P09884 1462 aaPredicted RBP9.5□□□□□ -0.89
PARP1-205ENST00000468608 DNMBPQ6XZF7 1577 aa9.5□□□□□ -0.89
PARP1-205ENST00000468608 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
PARP1-205ENST00000468608 AQRO60306 1485 aaKnown RBP eCLIP9.49□□□□□ -0.892e-9■■■■■ 36
PARP1-205ENST00000468608 WRNQ14191 1432 aaPredicted RBP eCLIP9.48□□□□□ -0.89
PARP1-205ENST00000468608 FGD5Q6ZNL6 1462 aa9.47□□□□□ -0.89
PARP1-205ENST00000468608 FBLN2P98095 1184 aa9.47□□□□□ -0.89
PARP1-205ENST00000468608 ATF5Q9Y2D1 282 aaPredicted RBP9.44□□□□□ -0.9
PARP1-205ENST00000468608 TARBP1Q13395 1621 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms