RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 ADAMTSL3P82987 1691 aa16.13■□□□□ 0.17
TNRC6A-205ENST00000464539 PCF11O94913 1555 aaKnown RBP16.12■□□□□ 0.17
TNRC6A-205ENST00000464539 PPP1R15AO75807 674 aaPredicted RBP16.12■□□□□ 0.17
TNRC6A-205ENST00000464539 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
TNRC6A-205ENST00000464539 ANP32CO43423 234 aa16.07■□□□□ 0.16
TNRC6A-205ENST00000464539 DDX10Q13206 875 aaKnown RBP16.07■□□□□ 0.16
TNRC6A-205ENST00000464539 PHLDB1Q86UU1 1377 aa16.07■□□□□ 0.16
TNRC6A-205ENST00000464539 CCNB3Q8WWL7 1395 aa16.07■□□□□ 0.16
TNRC6A-205ENST00000464539 ABCA8O94911 1581 aa16.05■□□□□ 0.16
TNRC6A-205ENST00000464539 ITGAEP38570 1179 aa16.05■□□□□ 0.16
TNRC6A-205ENST00000464539 BCORL1Q5H9F3 1711 aa16.03■□□□□ 0.16
TNRC6A-205ENST00000464539 MADDQ8WXG6 1647 aa16.02■□□□□ 0.15
TNRC6A-205ENST00000464539 SOCS7O14512 581 aa16.01■□□□□ 0.15
TNRC6A-205ENST00000464539 KANK4Q5T7N3 995 aaPredicted RBP16.01■□□□□ 0.15
TNRC6A-205ENST00000464539 DEKP35659 375 aaKnown RBP16.01■□□□□ 0.15
TNRC6A-205ENST00000464539 CERKQ8TCT0 537 aa16■□□□□ 0.15
TNRC6A-205ENST00000464539 ARID4BQ4LE39 1312 aaPredicted RBP15.99■□□□□ 0.15
TNRC6A-205ENST00000464539 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
TNRC6A-205ENST00000464539 DISP3Q9P2K9 1392 aa15.98■□□□□ 0.15
TNRC6A-205ENST00000464539 TRIM52Q96A61 297 aa15.97■□□□□ 0.15
TNRC6A-205ENST00000464539 NEO1Q92859 1461 aa15.97■□□□□ 0.15
TNRC6A-205ENST00000464539 ABCA9Q8IUA7 1624 aa15.96■□□□□ 0.15
TNRC6A-205ENST00000464539 RAPGEF3O95398 923 aa15.96■□□□□ 0.15
TNRC6A-205ENST00000464539 SETD5Q9C0A6 1442 aa15.96■□□□□ 0.15
TNRC6A-205ENST00000464539 ILDR2Q71H61 639 aa15.95■□□□□ 0.14
TNRC6A-205ENST00000464539 PRXQ9BXM0 1461 aa15.95■□□□□ 0.14
TNRC6A-205ENST00000464539 CTTNBP2Q8WZ74 1663 aa15.95■□□□□ 0.14
TNRC6A-205ENST00000464539 PPP4R2Q9NY27 417 aa15.95■□□□□ 0.14
TNRC6A-205ENST00000464539 HSPA2P54652 639 aa15.94■□□□□ 0.14
TNRC6A-205ENST00000464539 RIMS1Q86UR5 1692 aaKnown RBP15.94■□□□□ 0.14
TNRC6A-205ENST00000464539 FRMPD1Q5SYB0 1578 aa15.93■□□□□ 0.14
TNRC6A-205ENST00000464539 MAP3K1Q13233 1512 aa15.91■□□□□ 0.14
TNRC6A-205ENST00000464539 ARHGEF40Q8TER5 1519 aa15.91■□□□□ 0.14
TNRC6A-205ENST00000464539 ATP10BO94823 1461 aa15.91■□□□□ 0.14
TNRC6A-205ENST00000464539 POGZQ7Z3K3 1410 aa15.89■□□□□ 0.13
TNRC6A-205ENST00000464539 ARID3CA6NKF2 412 aa15.86■□□□□ 0.13
TNRC6A-205ENST00000464539 NOP58Q9Y2X3 529 aaKnown RBP15.86■□□□□ 0.13
TNRC6A-205ENST00000464539 FANCAO15360 1455 aa15.86■□□□□ 0.13
TNRC6A-205ENST00000464539 RANGAP1P46060 587 aaPredicted RBP15.86■□□□□ 0.13
TNRC6A-205ENST00000464539 DENND4BO75064 1496 aaPredicted RBP15.84■□□□□ 0.13
TNRC6A-205ENST00000464539 AKNAQ7Z591 1439 aa15.84■□□□□ 0.13
TNRC6A-205ENST00000464539 SPATA31D1Q6ZQQ2 1576 aa15.83■□□□□ 0.12
TNRC6A-205ENST00000464539 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.12
TNRC6A-205ENST00000464539 FHOD3Q2V2M9 1422 aa15.82■□□□□ 0.12
TNRC6A-205ENST00000464539 SIN3AQ96ST3 1273 aa15.82■□□□□ 0.12
TNRC6A-205ENST00000464539 HNRNPUQ00839 825 aaKnown RBP eCLIP15.81■□□□□ 0.12
TNRC6A-205ENST00000464539 RICTORQ6R327 1708 aa15.81■□□□□ 0.12
TNRC6A-205ENST00000464539 PHF23Q9BUL5 403 aaPredicted RBP15.8■□□□□ 0.12
TNRC6A-205ENST00000464539 DMRT2Q9Y5R5 561 aa15.79■□□□□ 0.12
TNRC6A-205ENST00000464539 EFCAB5A4FU69 1503 aa15.79■□□□□ 0.12
TNRC6A-205ENST00000464539 ZMYM4Q5VZL5 1548 aa15.79■□□□□ 0.12
TNRC6A-205ENST00000464539 TTC37Q6PGP7 1564 aa15.79■□□□□ 0.12
TNRC6A-205ENST00000464539 CFAP74Q9C0B2 1584 aa15.78■□□□□ 0.12
TNRC6A-205ENST00000464539 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
TNRC6A-205ENST00000464539 YEATS2Q9ULM3 1422 aa15.78■□□□□ 0.12
TNRC6A-205ENST00000464539 ARHGAP35Q9NRY4 1499 aa15.77■□□□□ 0.12
TNRC6A-205ENST00000464539 MAGI2Q86UL8 1455 aa15.76■□□□□ 0.11
TNRC6A-205ENST00000464539 RAPGEF6Q8TEU7 1601 aa15.76■□□□□ 0.11
TNRC6A-205ENST00000464539 P3H3Q8IVL6 736 aa15.76■□□□□ 0.11
TNRC6A-205ENST00000464539 FER1L4A9Z1Z3 1794 aa15.75■□□□□ 0.11
TNRC6A-205ENST00000464539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.11
TNRC6A-205ENST00000464539 PREX1Q8TCU6 1659 aa15.75■□□□□ 0.11
TNRC6A-205ENST00000464539 TIAM1Q13009 1591 aa15.75■□□□□ 0.11
TNRC6A-205ENST00000464539 MLECQ14165 292 aa15.73■□□□□ 0.11
TNRC6A-205ENST00000464539 RTL5Q5HYW3 569 aaPredicted RBP15.73■□□□□ 0.11
TNRC6A-205ENST00000464539 ANO8Q9HCE9 1232 aaPredicted RBP15.73■□□□□ 0.11
TNRC6A-205ENST00000464539 SIGLEC1Q9BZZ2 1709 aa15.73■□□□□ 0.11
TNRC6A-205ENST00000464539 IRX6P78412 446 aaPredicted RBP15.72■□□□□ 0.11
TNRC6A-205ENST00000464539 ARHGEF12Q9NZN5 1544 aa15.71■□□□□ 0.11
TNRC6A-205ENST00000464539 TONSLQ96HA7 1378 aa15.71■□□□□ 0.1
TNRC6A-205ENST00000464539 LRRC9Q6ZRR7 1453 aa15.71■□□□□ 0.1
TNRC6A-205ENST00000464539 IPO9Q96P70 1041 aaKnown RBP15.7■□□□□ 0.1
TNRC6A-205ENST00000464539 NUP153P49790 1475 aaKnown RBP15.7■□□□□ 0.1
TNRC6A-205ENST00000464539 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
TNRC6A-205ENST00000464539 PLEKHD1A6NEE1 506 aa15.69■□□□□ 0.1
TNRC6A-205ENST00000464539 ANP32AP39687 249 aaKnown RBP15.69■□□□□ 0.1
TNRC6A-205ENST00000464539 STRCQ7RTU9 1775 aa15.68■□□□□ 0.1
TNRC6A-205ENST00000464539 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
TNRC6A-205ENST00000464539 HECW1Q76N89 1606 aa15.68■□□□□ 0.1
TNRC6A-205ENST00000464539 PTPRTO14522 1441 aa15.68■□□□□ 0.1
TNRC6A-205ENST00000464539 UHRF1BP1Q6BDS2 1440 aa15.68■□□□□ 0.1
TNRC6A-205ENST00000464539 NBR1Q14596 966 aa15.67■□□□□ 0.1
TNRC6A-205ENST00000464539 IQSEC2Q5JU85 1478 aa15.67■□□□□ 0.1
TNRC6A-205ENST00000464539 ZBED9Q6R2W3 1325 aa15.66■□□□□ 0.1
TNRC6A-205ENST00000464539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.66■□□□□ 0.1
TNRC6A-205ENST00000464539 PAK3O75914 559 aaPredicted RBP15.66■□□□□ 0.1
TNRC6A-205ENST00000464539 ZBTB47Q9UFB7 747 aaPredicted RBP15.66■□□□□ 0.1
TNRC6A-205ENST00000464539 C9orf84Q5VXU9 1444 aa15.65■□□□□ 0.1
TNRC6A-205ENST00000464539 ATP10AO60312 1499 aa15.65■□□□□ 0.1
TNRC6A-205ENST00000464539 B4GALNT3Q6L9W6 998 aa15.65■□□□□ 0.1
TNRC6A-205ENST00000464539 USP35Q9P2H5 1018 aa15.65■□□□□ 0.1
TNRC6A-205ENST00000464539 CEBPAP49715 358 aaPredicted RBP15.63■□□□□ 0.09
TNRC6A-205ENST00000464539 WASHC2AQ641Q2 1341 aa15.63■□□□□ 0.09
TNRC6A-205ENST00000464539 SCAPERQ9BY12 1400 aa15.62■□□□□ 0.09
TNRC6A-205ENST00000464539 FAM50AQ14320 339 aaKnown RBP15.62■□□□□ 0.09
TNRC6A-205ENST00000464539 LTBP4Q8N2S1 1624 aa15.61■□□□□ 0.09
TNRC6A-205ENST00000464539 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
TNRC6A-205ENST00000464539 NCOA2Q15596 1464 aa15.6■□□□□ 0.09
TNRC6A-205ENST00000464539 C11orf95C9JLR9 678 aaPredicted RBP15.59■□□□□ 0.09
TNRC6A-205ENST00000464539 PLCH2O75038 1416 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms