RNA–Protein interactions for RNA: ENST00000460563.5

HMGN2-202, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,045 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-202ENST00000460563 PRXQ9BXM0 1461 aa18.54■□□□□ 0.56
HMGN2-202ENST00000460563 COL17A1Q9UMD9 1497 aaPredicted RBP18.54■□□□□ 0.56
HMGN2-202ENST00000460563 ABCA8O94911 1581 aa18.54■□□□□ 0.56
HMGN2-202ENST00000460563 WDR7Q9Y4E6 1490 aa18.52■□□□□ 0.56
HMGN2-202ENST00000460563 GOLGA3Q08378 1498 aa18.52■□□□□ 0.55
HMGN2-202ENST00000460563 SPDYE1Q8NFV5 336 aaPredicted RBP18.49■□□□□ 0.55
HMGN2-202ENST00000460563 TEX14Q8IWB6 1497 aa18.48■□□□□ 0.55
HMGN2-202ENST00000460563 CFAP43Q8NDM7 1665 aa18.47■□□□□ 0.55
HMGN2-202ENST00000460563 ADGRL1O94910 1474 aa18.46■□□□□ 0.55
HMGN2-202ENST00000460563 PLCD3Q8N3E9 789 aa18.45■□□□□ 0.54
HMGN2-202ENST00000460563 MIER1Q8N108 512 aa18.44■□□□□ 0.54
HMGN2-202ENST00000460563 CLEC11AQ9Y240 323 aa18.41■□□□□ 0.54
HMGN2-202ENST00000460563 SAMD9Q5K651 1589 aa18.4■□□□□ 0.54
HMGN2-202ENST00000460563 ARID3CA6NKF2 412 aa18.39■□□□□ 0.53
HMGN2-202ENST00000460563 P3H3Q8IVL6 736 aa18.39■□□□□ 0.53
HMGN2-202ENST00000460563 CD109Q6YHK3 1445 aa18.39■□□□□ 0.53
HMGN2-202ENST00000460563 MAGI3Q5TCQ9 1506 aa18.39■□□□□ 0.53
HMGN2-202ENST00000460563 KCNH8Q96L42 1107 aa18.38■□□□□ 0.53
HMGN2-202ENST00000460563 KLHL34Q8N239 644 aa18.36■□□□□ 0.53
HMGN2-202ENST00000460563 PITPNM1O00562 1244 aa18.35■□□□□ 0.53
HMGN2-202ENST00000460563 RAPGEF6Q8TEU7 1601 aa18.34■□□□□ 0.53
HMGN2-202ENST00000460563 ATP10BO94823 1461 aa18.34■□□□□ 0.53
HMGN2-202ENST00000460563 KIF21BO75037 1637 aa18.33■□□□□ 0.52
HMGN2-202ENST00000460563 ABCA9Q8IUA7 1624 aa18.31■□□□□ 0.52
HMGN2-202ENST00000460563 SPOCK2Q92563 424 aa18.3■□□□□ 0.52
HMGN2-202ENST00000460563 PRR29P0C7W0 189 aa18.27■□□□□ 0.52
HMGN2-202ENST00000460563 HECW2Q9P2P5 1572 aa18.26■□□□□ 0.51
HMGN2-202ENST00000460563 FHOD3Q2V2M9 1422 aa18.26■□□□□ 0.51
HMGN2-202ENST00000460563 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
HMGN2-202ENST00000460563 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
HMGN2-202ENST00000460563 EEA1Q15075 1411 aa18.23■□□□□ 0.51
HMGN2-202ENST00000460563 ARAP3Q8WWN8 1544 aa18.23■□□□□ 0.51
HMGN2-202ENST00000460563 PLEKHG5O94827 1062 aa18.23■□□□□ 0.51
HMGN2-202ENST00000460563 FAM9AQ8IZU1 332 aaPredicted RBP18.22■□□□□ 0.51
HMGN2-202ENST00000460563 CREBZFQ9NS37 354 aa18.22■□□□□ 0.51
HMGN2-202ENST00000460563 FRMPD1Q5SYB0 1578 aa18.21■□□□□ 0.51
HMGN2-202ENST00000460563 PKD2Q13563 968 aa18.19■□□□□ 0.5
HMGN2-202ENST00000460563 ZBTB47Q9UFB7 747 aaPredicted RBP18.16■□□□□ 0.5
HMGN2-202ENST00000460563 EFCAB5A4FU69 1503 aa18.15■□□□□ 0.5
HMGN2-202ENST00000460563 NEO1Q92859 1461 aa18.14■□□□□ 0.5
HMGN2-202ENST00000460563 TTC37Q6PGP7 1564 aa18.13■□□□□ 0.49
HMGN2-202ENST00000460563 ADAMTSL3P82987 1691 aa18.13■□□□□ 0.49
HMGN2-202ENST00000460563 RAPGEF3O95398 923 aa18.13■□□□□ 0.49
HMGN2-202ENST00000460563 RICTORQ6R327 1708 aa18.12■□□□□ 0.49
HMGN2-202ENST00000460563 MNX1P50219 401 aaPredicted RBP18.11■□□□□ 0.49
HMGN2-202ENST00000460563 CDK13Q14004 1512 aaKnown RBP18.11■□□□□ 0.49
HMGN2-202ENST00000460563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.11■□□□□ 0.498e-44■■□□□ 13.2
HMGN2-202ENST00000460563 BCORL1Q5H9F3 1711 aa18.1■□□□□ 0.49
HMGN2-202ENST00000460563 PHLDB1Q86UU1 1377 aa18.1■□□□□ 0.49
HMGN2-202ENST00000460563 ARHGEF40Q8TER5 1519 aa18.08■□□□□ 0.49
HMGN2-202ENST00000460563 MADDQ8WXG6 1647 aa18.08■□□□□ 0.48
HMGN2-202ENST00000460563 CFAP74Q9C0B2 1584 aa18.08■□□□□ 0.48
HMGN2-202ENST00000460563 ILDR1Q86SU0 546 aaPredicted RBP18.07■□□□□ 0.48
HMGN2-202ENST00000460563 SIGLEC1Q9BZZ2 1709 aa18.06■□□□□ 0.48
HMGN2-202ENST00000460563 FANCAO15360 1455 aa18.05■□□□□ 0.48
HMGN2-202ENST00000460563 PTPRMP28827 1452 aa18.05■□□□□ 0.48
HMGN2-202ENST00000460563 PLEKHD1A6NEE1 506 aa18.03■□□□□ 0.48
HMGN2-202ENST00000460563 AKNAQ7Z591 1439 aa18.03■□□□□ 0.48
HMGN2-202ENST00000460563 RIMS1Q86UR5 1692 aaKnown RBP18.03■□□□□ 0.48
HMGN2-202ENST00000460563 DENND4BO75064 1496 aaPredicted RBP18.02■□□□□ 0.48
HMGN2-202ENST00000460563 LRRIQ1Q96JM4 1722 aa18.02■□□□□ 0.48
HMGN2-202ENST00000460563 HECW1Q76N89 1606 aa18.01■□□□□ 0.47
HMGN2-202ENST00000460563 NUBP1P53384 320 aa18.01■□□□□ 0.47
HMGN2-202ENST00000460563 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
HMGN2-202ENST00000460563 ZMYM4Q5VZL5 1548 aa18■□□□□ 0.47
HMGN2-202ENST00000460563 MYO5CQ9NQX4 1742 aa17.99■□□□□ 0.47
HMGN2-202ENST00000460563 KIF14Q15058 1648 aa17.98■□□□□ 0.47
HMGN2-202ENST00000460563 CHADLQ6NUI6 762 aa17.98■□□□□ 0.47
HMGN2-202ENST00000460563 ARID4BQ4LE39 1312 aaPredicted RBP17.98■□□□□ 0.47
HMGN2-202ENST00000460563 UBTFP17480 764 aaKnown RBP17.97■□□□□ 0.47
HMGN2-202ENST00000460563 ZFYVE16Q7Z3T8 1539 aa17.97■□□□□ 0.47
HMGN2-202ENST00000460563 YEATS2Q9ULM3 1422 aa17.97■□□□□ 0.47
HMGN2-202ENST00000460563 ECM2O94769 699 aaPredicted RBP17.94■□□□□ 0.46
HMGN2-202ENST00000460563 CIZ1Q9ULV3 898 aaPredicted RBP17.94■□□□□ 0.46
HMGN2-202ENST00000460563 FMN1Q68DA7 1419 aa17.93■□□□□ 0.46
HMGN2-202ENST00000460563 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
HMGN2-202ENST00000460563 PCF11O94913 1555 aaKnown RBP17.92■□□□□ 0.46
HMGN2-202ENST00000460563 FER1L4A9Z1Z3 1794 aa17.92■□□□□ 0.46
HMGN2-202ENST00000460563 FXR2P51116 673 aaKnown RBP eCLIP17.92■□□□□ 0.46
HMGN2-202ENST00000460563 CHRDL2Q6WN34 429 aa17.92■□□□□ 0.46
HMGN2-202ENST00000460563 PLCH2O75038 1416 aa17.91■□□□□ 0.46
HMGN2-202ENST00000460563 POGZQ7Z3K3 1410 aa17.91■□□□□ 0.46
HMGN2-202ENST00000460563 LMTK3Q96Q04 1460 aa17.9■□□□□ 0.46
HMGN2-202ENST00000460563 SCAPERQ9BY12 1400 aa17.89■□□□□ 0.46
HMGN2-202ENST00000460563 MAGI2Q86UL8 1455 aa17.87■□□□□ 0.45
HMGN2-202ENST00000460563 CDC42BPBQ9Y5S2 1711 aa17.86■□□□□ 0.45
HMGN2-202ENST00000460563 PRKAR2AP13861 404 aaKnown RBP17.86■□□□□ 0.45
HMGN2-202ENST00000460563 TROQ12816 1431 aaPredicted RBP17.86■□□□□ 0.45
HMGN2-202ENST00000460563 ARHGAP5Q13017 1502 aa17.85■□□□□ 0.45
HMGN2-202ENST00000460563 RASEFQ8IZ41 740 aa17.85■□□□□ 0.45
HMGN2-202ENST00000460563 MLECQ14165 292 aa17.83■□□□□ 0.44
HMGN2-202ENST00000460563 PREX2Q70Z35 1606 aa17.83■□□□□ 0.44
HMGN2-202ENST00000460563 PIP4P2Q8N4L2 257 aa17.82■□□□□ 0.44
HMGN2-202ENST00000460563 KDM5CP41229 1560 aa17.82■□□□□ 0.44
HMGN2-202ENST00000460563 RGL2O15211 777 aa17.81■□□□□ 0.44
HMGN2-202ENST00000460563 GSE1Q14687 1217 aa17.81■□□□□ 0.44
HMGN2-202ENST00000460563 FARP1Q9Y4F1 1045 aaPredicted RBP17.81■□□□□ 0.44
HMGN2-202ENST00000460563 CLIP1P30622 1438 aa17.81■□□□□ 0.44
HMGN2-202ENST00000460563 C9orf84Q5VXU9 1444 aa17.81■□□□□ 0.44
HMGN2-202ENST00000460563 DCAF8Q5TAQ9 597 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms