RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 LRRC9Q6ZRR7 1453 aa13.16□□□□□ -0.3
UFD1-205ENST00000459854 ASXL2Q76L83 1435 aa13.15□□□□□ -0.3
UFD1-205ENST00000459854 ATP10BO94823 1461 aa13.15□□□□□ -0.3
UFD1-205ENST00000459854 NEUROD1Q13562 356 aa13.15□□□□□ -0.31
UFD1-205ENST00000459854 NUP153P49790 1475 aaKnown RBP13.14□□□□□ -0.31
UFD1-205ENST00000459854 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
UFD1-205ENST00000459854 SHROOM2Q13796 1616 aa13.13□□□□□ -0.31
UFD1-205ENST00000459854 WDR7Q9Y4E6 1490 aa13.12□□□□□ -0.31
UFD1-205ENST00000459854 DDRGK1Q96HY6 314 aa13.12□□□□□ -0.31
UFD1-205ENST00000459854 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
UFD1-205ENST00000459854 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
UFD1-205ENST00000459854 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
UFD1-205ENST00000459854 CD109Q6YHK3 1445 aa13.12□□□□□ -0.31
UFD1-205ENST00000459854 TIAM1Q13009 1591 aa13.12□□□□□ -0.31
UFD1-205ENST00000459854 ERCC6L2Q5T890 1561 aa13.12□□□□□ -0.31
UFD1-205ENST00000459854 MAP3K1Q13233 1512 aa13.12□□□□□ -0.31
UFD1-205ENST00000459854 ERICH6BQ5W0A0 696 aa13.11□□□□□ -0.31
UFD1-205ENST00000459854 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
UFD1-205ENST00000459854 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
UFD1-205ENST00000459854 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
UFD1-205ENST00000459854 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
UFD1-205ENST00000459854 KIF14Q15058 1648 aa13.09□□□□□ -0.31
UFD1-205ENST00000459854 ABCA8O94911 1581 aa13.09□□□□□ -0.31
UFD1-205ENST00000459854 NPM2Q86SE8 214 aaKnown RBP13.09□□□□□ -0.31
UFD1-205ENST00000459854 MYOM3Q5VTT5 1437 aa13.09□□□□□ -0.31
UFD1-205ENST00000459854 HNRNPMP52272 730 aaKnown RBP eCLIP13.08□□□□□ -0.31
UFD1-205ENST00000459854 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
UFD1-205ENST00000459854 KDM5BQ9UGL1 1544 aa13.07□□□□□ -0.32
UFD1-205ENST00000459854 TEX14Q8IWB6 1497 aa13.06□□□□□ -0.32
UFD1-205ENST00000459854 RRP7BPQ9NSQ0 103 aa13.06□□□□□ -0.32
UFD1-205ENST00000459854 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
UFD1-205ENST00000459854 PPM1GO15355 546 aaPredicted RBP13.05□□□□□ -0.32
UFD1-205ENST00000459854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.321e-6■■□□□ 11.7
UFD1-205ENST00000459854 ANKRD30AQ9BXX3 1397 aa13.04□□□□□ -0.32
UFD1-205ENST00000459854 MIA2Q96PC5 1412 aa13.04□□□□□ -0.32
UFD1-205ENST00000459854 CNGB1Q14028 1251 aaPredicted RBP13.04□□□□□ -0.32
UFD1-205ENST00000459854 TRIM44Q96DX7 344 aaPredicted RBP13.04□□□□□ -0.32
UFD1-205ENST00000459854 PHLDB1Q86UU1 1377 aa13.03□□□□□ -0.32
UFD1-205ENST00000459854 FGD6Q6ZV73 1430 aa13.03□□□□□ -0.32
UFD1-205ENST00000459854 HSP90AA1P07900 732 aaKnown RBP13.03□□□□□ -0.32
UFD1-205ENST00000459854 NBR1Q14596 966 aa13.02□□□□□ -0.32
UFD1-205ENST00000459854 BCL11AQ9H165 835 aa13.01□□□□□ -0.33
UFD1-205ENST00000459854 NCLP19338 710 aaKnown RBP13.01□□□□□ -0.33
UFD1-205ENST00000459854 GOLGA6L2Q8N9W4 650 aaPredicted RBP13□□□□□ -0.33
UFD1-205ENST00000459854 CCDC136Q96JN2 1154 aa13□□□□□ -0.33
UFD1-205ENST00000459854 KANK1Q14678 1352 aa13□□□□□ -0.33
UFD1-205ENST00000459854 SCAPERQ9BY12 1400 aa12.99□□□□□ -0.33
UFD1-205ENST00000459854 PLCH2O75038 1416 aa12.99□□□□□ -0.33
UFD1-205ENST00000459854 FANCAO15360 1455 aa12.98□□□□□ -0.33
UFD1-205ENST00000459854 BECN1Q14457 450 aa12.97□□□□□ -0.33
UFD1-205ENST00000459854 NEFMP07197 916 aa12.97□□□□□ -0.33
UFD1-205ENST00000459854 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
UFD1-205ENST00000459854 ZCCHC11Q5TAX3 1644 aaKnown RBP12.97□□□□□ -0.33
UFD1-205ENST00000459854 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
UFD1-205ENST00000459854 ADGRL1O94910 1474 aa12.97□□□□□ -0.33
UFD1-205ENST00000459854 PLPPR3Q6T4P5 718 aa12.96□□□□□ -0.33
UFD1-205ENST00000459854 MLECQ14165 292 aa12.96□□□□□ -0.33
UFD1-205ENST00000459854 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.34
UFD1-205ENST00000459854 AFAP1Q8N556 730 aa12.95□□□□□ -0.34
UFD1-205ENST00000459854 ADCY10Q96PN6 1610 aa12.95□□□□□ -0.34
UFD1-205ENST00000459854 AKNAQ7Z591 1439 aa12.95□□□□□ -0.34
UFD1-205ENST00000459854 DENND4BO75064 1496 aaPredicted RBP12.95□□□□□ -0.34
UFD1-205ENST00000459854 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
UFD1-205ENST00000459854 GGT6Q6P531 493 aa12.95□□□□□ -0.34
UFD1-205ENST00000459854 ABCC10Q5T3U5 1492 aa12.94□□□□□ -0.34
UFD1-205ENST00000459854 CFAP43Q8NDM7 1665 aa12.94□□□□□ -0.34
UFD1-205ENST00000459854 KIF3BO15066 747 aa12.94□□□□□ -0.34
UFD1-205ENST00000459854 RAPGEF3O95398 923 aa12.94□□□□□ -0.34
UFD1-205ENST00000459854 GPATCH8Q9UKJ3 1502 aaKnown RBP12.93□□□□□ -0.34
UFD1-205ENST00000459854 MAPKBP1O60336 1514 aa12.92□□□□□ -0.34
UFD1-205ENST00000459854 ITSN2Q9NZM3 1697 aa12.91□□□□□ -0.34
UFD1-205ENST00000459854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.9□□□□□ -0.342e-7■□□□□ 9.2
UFD1-205ENST00000459854 CCDC141Q6ZP82 1450 aa12.9□□□□□ -0.34
UFD1-205ENST00000459854 CAMSAP2Q08AD1 1489 aa12.89□□□□□ -0.35
UFD1-205ENST00000459854 NEO1Q92859 1461 aa12.89□□□□□ -0.35
UFD1-205ENST00000459854 GOLGA6L22H0YM25 854 aa12.89□□□□□ -0.35
UFD1-205ENST00000459854 RRBP1Q9P2E9 1410 aaKnown RBP12.89□□□□□ -0.35
UFD1-205ENST00000459854 KIF15Q9NS87 1388 aa12.88□□□□□ -0.35
UFD1-205ENST00000459854 SETD5Q9C0A6 1442 aa12.88□□□□□ -0.35
UFD1-205ENST00000459854 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
UFD1-205ENST00000459854 POGZQ7Z3K3 1410 aa12.88□□□□□ -0.35
UFD1-205ENST00000459854 CHGAP10645 457 aaKnown RBP12.88□□□□□ -0.35
UFD1-205ENST00000459854 C9orf84Q5VXU9 1444 aa12.88□□□□□ -0.35
UFD1-205ENST00000459854 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
UFD1-205ENST00000459854 WASHC2CQ9Y4E1 1318 aa12.87□□□□□ -0.35
UFD1-205ENST00000459854 CFAP74Q9C0B2 1584 aa12.86□□□□□ -0.35
UFD1-205ENST00000459854 ZNF518AQ6AHZ1 1483 aa12.86□□□□□ -0.35
UFD1-205ENST00000459854 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.85□□□□□ -0.35
UFD1-205ENST00000459854 CDK11BP21127 795 aaKnown RBP12.85□□□□□ -0.35
UFD1-205ENST00000459854 DAPK1P53355 1430 aa12.85□□□□□ -0.35
UFD1-205ENST00000459854 PTPN23Q9H3S7 1636 aa12.85□□□□□ -0.35
UFD1-205ENST00000459854 NUP155O75694 1391 aa12.84□□□□□ -0.35
UFD1-205ENST00000459854 NOP58Q9Y2X3 529 aaKnown RBP12.84□□□□□ -0.35
UFD1-205ENST00000459854 MAGI3Q5TCQ9 1506 aa12.82□□□□□ -0.36
UFD1-205ENST00000459854 ANKRD50Q9ULJ7 1429 aa12.82□□□□□ -0.36
UFD1-205ENST00000459854 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
UFD1-205ENST00000459854 MIER1Q8N108 512 aa12.81□□□□□ -0.36
UFD1-205ENST00000459854 NAP1L5Q96NT1 182 aaPredicted RBP12.81□□□□□ -0.36
UFD1-205ENST00000459854 MYO5CQ9NQX4 1742 aa12.81□□□□□ -0.36
UFD1-205ENST00000459854 ROCK1Q13464 1354 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms