RNA–Protein interactions for RNA: ENST00000453024.5

CTNNB1-210, Transcript of catenin beta 1, humanhuman

TSL 2 BASIC

Gene CTNNB1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-210ENST00000453024 L3MBTL2Q969R5 705 aa21.97■■□□□ 1.11
CTNNB1-210ENST00000453024 P3H3Q8IVL6 736 aa21.95■■□□□ 1.1
CTNNB1-210ENST00000453024 DHX29Q7Z478 1369 aaKnown RBP21.94■■□□□ 1.1
CTNNB1-210ENST00000453024 ABCA5Q8WWZ7 1642 aa21.94■■□□□ 1.1
CTNNB1-210ENST00000453024 PNISRQ8TF01 805 aaKnown RBP21.94■■□□□ 1.1
CTNNB1-210ENST00000453024 CUX1P39880 1505 aa21.94■■□□□ 1.1
CTNNB1-210ENST00000453024 RCAN3Q9UKA8 241 aa21.93■■□□□ 1.1
CTNNB1-210ENST00000453024 FMN1Q68DA7 1419 aa21.93■■□□□ 1.1
CTNNB1-210ENST00000453024 DENND4BO75064 1496 aaPredicted RBP21.91■■□□□ 1.1
CTNNB1-210ENST00000453024 NBPF8Q3BBV2 869 aa21.9■■□□□ 1.1
CTNNB1-210ENST00000453024 PLEKHG5O94827 1062 aa21.89■■□□□ 1.1
CTNNB1-210ENST00000453024 HSP90AA2PQ14568 343 aaPredicted RBP21.89■■□□□ 1.1
CTNNB1-210ENST00000453024 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.09
CTNNB1-210ENST00000453024 PODXL2Q9NZ53 605 aa21.88■■□□□ 1.09
CTNNB1-210ENST00000453024 SPATA31E1Q6ZUB1 1445 aa21.87■■□□□ 1.09
CTNNB1-210ENST00000453024 NAP1L5Q96NT1 182 aaPredicted RBP21.87■■□□□ 1.09
CTNNB1-210ENST00000453024 POLR1AO95602 1720 aaPredicted RBP21.85■■□□□ 1.09
CTNNB1-210ENST00000453024 TMC1Q8TDI8 760 aa21.85■■□□□ 1.09
CTNNB1-210ENST00000453024 POGKQ9P215 609 aa21.85■■□□□ 1.09
CTNNB1-210ENST00000453024 RRP9O43818 475 aaKnown RBP21.84■■□□□ 1.09
CTNNB1-210ENST00000453024 IGF1RP08069 1367 aa21.83■■□□□ 1.09
CTNNB1-210ENST00000453024 POLR3GLQ9BT43 218 aa21.82■■□□□ 1.08
CTNNB1-210ENST00000453024 HSP90AA1P07900 732 aaKnown RBP21.81■■□□□ 1.08
CTNNB1-210ENST00000453024 PABPN1Q86U42 306 aaKnown RBP eCLIP21.81■■□□□ 1.08
CTNNB1-210ENST00000453024 PLIN1O60240 522 aa21.81■■□□□ 1.08
CTNNB1-210ENST00000453024 RRP7BPQ9NSQ0 103 aa21.81■■□□□ 1.08
CTNNB1-210ENST00000453024 FOXD1Q16676 465 aa21.8■■□□□ 1.08
CTNNB1-210ENST00000453024 FHOD3Q2V2M9 1422 aa21.79■■□□□ 1.08
CTNNB1-210ENST00000453024 FYCO1Q9BQS8 1478 aa21.79■■□□□ 1.08
CTNNB1-210ENST00000453024 LRPPRCP42704 1394 aaKnown RBP21.78■■□□□ 1.08
CTNNB1-210ENST00000453024 CRBNQ96SW2 442 aa21.78■■□□□ 1.08
CTNNB1-210ENST00000453024 PNNQ9H307 717 aaKnown RBP21.78■■□□□ 1.08
CTNNB1-210ENST00000453024 HECW1Q76N89 1606 aa21.76■■□□□ 1.07
CTNNB1-210ENST00000453024 C8orf34Q49A92 452 aa21.76■■□□□ 1.07
CTNNB1-210ENST00000453024 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
CTNNB1-210ENST00000453024 CASKIN1Q8WXD9 1431 aa21.75■■□□□ 1.07
CTNNB1-210ENST00000453024 FAM161AQ3B820 660 aa21.75■■□□□ 1.07
CTNNB1-210ENST00000453024 L1TD1Q5T7N2 865 aaKnown RBP21.75■■□□□ 1.07
CTNNB1-210ENST00000453024 MPHOSPH9Q99550 1183 aa21.75■■□□□ 1.07
CTNNB1-210ENST00000453024 CHIC2Q9UKJ5 165 aa21.73■■□□□ 1.07
CTNNB1-210ENST00000453024 CLCN1P35523 988 aa21.71■■□□□ 1.07
CTNNB1-210ENST00000453024 CDCA7LQ96GN5 454 aa21.71■■□□□ 1.07
CTNNB1-210ENST00000453024 MTUS2Q5JR59 1369 aa21.7■■□□□ 1.06
CTNNB1-210ENST00000453024 KDM2BQ8NHM5 1336 aa21.7■■□□□ 1.06
CTNNB1-210ENST00000453024 KDM6BO15054 1643 aa21.69■■□□□ 1.06
CTNNB1-210ENST00000453024 TEX14Q8IWB6 1497 aa21.69■■□□□ 1.06
CTNNB1-210ENST00000453024 ARXQ96QS3 562 aa21.69■■□□□ 1.06
CTNNB1-210ENST00000453024 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
CTNNB1-210ENST00000453024 KTN1Q86UP2 1357 aaKnown RBP21.68■■□□□ 1.06
CTNNB1-210ENST00000453024 BCORL1Q5H9F3 1711 aa21.67■■□□□ 1.06
CTNNB1-210ENST00000453024 MYOM3Q5VTT5 1437 aa21.67■■□□□ 1.06
CTNNB1-210ENST00000453024 MIA2Q96PC5 1412 aa21.66■■□□□ 1.06
CTNNB1-210ENST00000453024 PDE3BQ13370 1112 aa21.66■■□□□ 1.06
CTNNB1-210ENST00000453024 XRCC6P12956 609 aaKnown RBP eCLIP21.65■■□□□ 1.066e-9■□□□□ 9.9
CTNNB1-210ENST00000453024 RPRD2Q5VT52 1461 aaKnown RBP21.65■■□□□ 1.06
CTNNB1-210ENST00000453024 C20orf194Q5TEA3 1177 aa21.64■■□□□ 1.05
CTNNB1-210ENST00000453024 BRD4O60885 1362 aaPredicted RBP21.64■■□□□ 1.05
CTNNB1-210ENST00000453024 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.05
CTNNB1-210ENST00000453024 ANKRD30BQ9BXX2 1392 aa21.62■■□□□ 1.05
CTNNB1-210ENST00000453024 GCC2Q8IWJ2 1684 aa21.62■■□□□ 1.05
CTNNB1-210ENST00000453024 CENPQQ7L2Z9 268 aaPredicted RBP21.62■■□□□ 1.05
CTNNB1-210ENST00000453024 PANK2Q9BZ23 570 aa21.61■■□□□ 1.05
CTNNB1-210ENST00000453024 MYBBP1AQ9BQG0 1328 aaKnown RBP21.61■■□□□ 1.05
CTNNB1-210ENST00000453024 USP47Q96K76 1375 aa21.59■■□□□ 1.05
CTNNB1-210ENST00000453024 KIF15Q9NS87 1388 aa21.59■■□□□ 1.05
CTNNB1-210ENST00000453024 RGS3P49796 1198 aa21.58■■□□□ 1.05
CTNNB1-210ENST00000453024 SLKQ9H2G2 1235 aaPredicted RBP21.58■■□□□ 1.04
CTNNB1-210ENST00000453024 GOLGA6L3A6NEY3 463 aa21.56■■□□□ 1.04
CTNNB1-210ENST00000453024 FSD2A1L4K1 749 aa21.55■■□□□ 1.04
CTNNB1-210ENST00000453024 USP19O94966 1318 aa21.55■■□□□ 1.04
CTNNB1-210ENST00000453024 ARID4BQ4LE39 1312 aaPredicted RBP21.55■■□□□ 1.04
CTNNB1-210ENST00000453024 CFTRP13569 1480 aa21.54■■□□□ 1.04
CTNNB1-210ENST00000453024 SNAPC4Q5SXM2 1469 aa21.54■■□□□ 1.04
CTNNB1-210ENST00000453024 RALBP1Q15311 655 aa21.53■■□□□ 1.04
CTNNB1-210ENST00000453024 EFCAB5A4FU69 1503 aa21.53■■□□□ 1.04
CTNNB1-210ENST00000453024 ROCK2O75116 1388 aaKnown RBP21.52■■□□□ 1.04
CTNNB1-210ENST00000453024 ZNF326Q5BKZ1 582 aaKnown RBP21.51■■□□□ 1.03
CTNNB1-210ENST00000453024 GZF1Q9H116 711 aaPredicted RBP21.49■■□□□ 1.03
CTNNB1-210ENST00000453024 ANTXR1Q9H6X2 564 aa21.49■■□□□ 1.03
CTNNB1-210ENST00000453024 SUPT6HQ7KZ85 1726 aaKnown RBP21.48■■□□□ 1.03
CTNNB1-210ENST00000453024 ERBB4Q15303 1308 aa21.47■■□□□ 1.03
CTNNB1-210ENST00000453024 LRRIQ1Q96JM4 1722 aa21.47■■□□□ 1.03
CTNNB1-210ENST00000453024 BECN1Q14457 450 aa21.47■■□□□ 1.03
CTNNB1-210ENST00000453024 RBM10P98175 930 aaKnown RBP21.46■■□□□ 1.03
CTNNB1-210ENST00000453024 PDCL3Q9H2J4 239 aa21.46■■□□□ 1.03
CTNNB1-210ENST00000453024 KDM5CP41229 1560 aa21.46■■□□□ 1.03
CTNNB1-210ENST00000453024 NLRP13Q86W25 1043 aa21.46■■□□□ 1.03
CTNNB1-210ENST00000453024 ESPNB1AK53 854 aa21.45■■□□□ 1.02
CTNNB1-210ENST00000453024 SEC24BO95487 1268 aa21.45■■□□□ 1.02
CTNNB1-210ENST00000453024 A0A0U1RQG5 324 aaPredicted RBP21.45■■□□□ 1.02
CTNNB1-210ENST00000453024 PRDM4Q9UKN5 801 aa21.44■■□□□ 1.02
CTNNB1-210ENST00000453024 CENPJQ9HC77 1338 aaPredicted RBP21.44■■□□□ 1.02
CTNNB1-210ENST00000453024 UGGT2Q9NYU1 1516 aa21.44■■□□□ 1.02
CTNNB1-210ENST00000453024 TCOF1Q13428 1488 aaKnown RBP21.43■■□□□ 1.02
CTNNB1-210ENST00000453024 SLC4A1APQ9BWU0 796 aaKnown RBP21.42■■□□□ 1.02
CTNNB1-210ENST00000453024 CALD1Q05682 793 aaKnown RBP21.42■■□□□ 1.02
CTNNB1-210ENST00000453024 MBD5Q9P267 1494 aa21.42■■□□□ 1.02
CTNNB1-210ENST00000453024 THOC2Q8NI27 1593 aaKnown RBP21.41■■□□□ 1.02
CTNNB1-210ENST00000453024 TPM2P07951 284 aa21.41■■□□□ 1.02
CTNNB1-210ENST00000453024 EHBP1L1Q8N3D4 1523 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms