RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 TOP2BQ02880 1626 aa9.39□□□□□ -0.91
BEST1-202ENST00000449131 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
BEST1-202ENST00000449131 TNNT2P45379 298 aaPredicted RBP9.37□□□□□ -0.91
BEST1-202ENST00000449131 TMF1P82094 1093 aa9.37□□□□□ -0.91
BEST1-202ENST00000449131 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
BEST1-202ENST00000449131 NUP155O75694 1391 aa9.36□□□□□ -0.91
BEST1-202ENST00000449131 RGS3P49796 1198 aa9.36□□□□□ -0.91
BEST1-202ENST00000449131 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
BEST1-202ENST00000449131 AQRO60306 1485 aaKnown RBP eCLIP9.36□□□□□ -0.91
BEST1-202ENST00000449131 KLHL34Q8N239 644 aa9.35□□□□□ -0.91
BEST1-202ENST00000449131 PPM1GO15355 546 aaPredicted RBP9.34□□□□□ -0.91
BEST1-202ENST00000449131 DDRGK1Q96HY6 314 aa9.34□□□□□ -0.91
BEST1-202ENST00000449131 KIF21BO75037 1637 aa9.33□□□□□ -0.92
BEST1-202ENST00000449131 CARMIL2Q6F5E8 1435 aa9.33□□□□□ -0.92
BEST1-202ENST00000449131 FRAT1Q92837 279 aaPredicted RBP9.33□□□□□ -0.92
BEST1-202ENST00000449131 POLA1P09884 1462 aaPredicted RBP9.33□□□□□ -0.92
BEST1-202ENST00000449131 ADRA2BP18089 450 aa9.33□□□□□ -0.92
BEST1-202ENST00000449131 ARAP1Q96P48 1450 aa9.33□□□□□ -0.92
BEST1-202ENST00000449131 ANKRD30AQ9BXX3 1397 aa9.33□□□□□ -0.92
BEST1-202ENST00000449131 PRXQ9BXM0 1461 aa9.32□□□□□ -0.92
BEST1-202ENST00000449131 HNRNPMP52272 730 aaKnown RBP eCLIP9.32□□□□□ -0.92
BEST1-202ENST00000449131 TOPBP1Q92547 1522 aa9.32□□□□□ -0.92
BEST1-202ENST00000449131 ANP32BQ92688 251 aaKnown RBP9.31□□□□□ -0.92
BEST1-202ENST00000449131 MYH16Q9H6N6 1097 aa9.31□□□□□ -0.92
BEST1-202ENST00000449131 BECN1Q14457 450 aa9.3□□□□□ -0.92
BEST1-202ENST00000449131 ROCK2O75116 1388 aaKnown RBP9.3□□□□□ -0.92
BEST1-202ENST00000449131 FTSJ3Q8IY81 847 aaKnown RBP9.3□□□□□ -0.92
BEST1-202ENST00000449131 JPH4Q96JJ6 628 aa9.3□□□□□ -0.92
BEST1-202ENST00000449131 POGKQ9P215 609 aa9.3□□□□□ -0.92
BEST1-202ENST00000449131 KTN1Q86UP2 1357 aaKnown RBP9.3□□□□□ -0.92
BEST1-202ENST00000449131 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
BEST1-202ENST00000449131 PLEKHG5O94827 1062 aa9.29□□□□□ -0.92
BEST1-202ENST00000449131 ERICH6BQ5W0A0 696 aa9.29□□□□□ -0.92
BEST1-202ENST00000449131 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.29□□□□□ -0.92
BEST1-202ENST00000449131 GAPVD1Q14C86 1478 aa9.29□□□□□ -0.92
BEST1-202ENST00000449131 U2SURPO15042 1029 aaKnown RBP9.29□□□□□ -0.92
BEST1-202ENST00000449131 CCDC18Q5T9S5 1454 aa9.29□□□□□ -0.92
BEST1-202ENST00000449131 NUDCQ9Y266 331 aa9.28□□□□□ -0.92
BEST1-202ENST00000449131 RALBP1Q15311 655 aa9.28□□□□□ -0.92
BEST1-202ENST00000449131 MAPK8IP3Q9UPT6 1336 aa9.28□□□□□ -0.92
BEST1-202ENST00000449131 RCAN3Q9UKA8 241 aa9.28□□□□□ -0.92
BEST1-202ENST00000449131 GGT6Q6P531 493 aa9.28□□□□□ -0.92
BEST1-202ENST00000449131 KANK1Q14678 1352 aa9.27□□□□□ -0.93
BEST1-202ENST00000449131 SAFB2Q14151 953 aaKnown RBP eCLIP9.27□□□□□ -0.93
BEST1-202ENST00000449131 EFCAB2Q5VUJ9 269 aa9.27□□□□□ -0.93
BEST1-202ENST00000449131 PRKRIP1Q9H875 184 aaPredicted RBP9.27□□□□□ -0.93
BEST1-202ENST00000449131 ST20-MTHFSA0A0A6YYL1 179 aa9.26□□□□□ -0.93
BEST1-202ENST00000449131 SLC4A3P48751 1232 aa9.26□□□□□ -0.93
BEST1-202ENST00000449131 CCDC184Q52MB2 194 aa9.26□□□□□ -0.93
BEST1-202ENST00000449131 URB2Q14146 1524 aaKnown RBP9.26□□□□□ -0.93
BEST1-202ENST00000449131 MORC1Q86VD1 984 aa9.26□□□□□ -0.93
BEST1-202ENST00000449131 PLIN1O60240 522 aa9.25□□□□□ -0.93
BEST1-202ENST00000449131 ZBTB7CA1YPR0 619 aa9.25□□□□□ -0.93
BEST1-202ENST00000449131 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
BEST1-202ENST00000449131 LRRC9Q6ZRR7 1453 aa9.24□□□□□ -0.93
BEST1-202ENST00000449131 ARID4BQ4LE39 1312 aaPredicted RBP9.24□□□□□ -0.93
BEST1-202ENST00000449131 FGD6Q6ZV73 1430 aa9.24□□□□□ -0.93
BEST1-202ENST00000449131 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
BEST1-202ENST00000449131 NLRP13Q86W25 1043 aa9.24□□□□□ -0.93
BEST1-202ENST00000449131 ZNF644Q9H582 1327 aaPredicted RBP9.24□□□□□ -0.93
BEST1-202ENST00000449131 BIVM-ERCC5R4GMW8 1640 aa9.23□□□□□ -0.93
BEST1-202ENST00000449131 KIF3BO15066 747 aa9.23□□□□□ -0.93
BEST1-202ENST00000449131 STK26Q9P289 416 aa9.22□□□□□ -0.93
BEST1-202ENST00000449131 RSPH4AQ5TD94 716 aa9.22□□□□□ -0.93
BEST1-202ENST00000449131 ANO8Q9HCE9 1232 aaPredicted RBP9.22□□□□□ -0.93
BEST1-202ENST00000449131 DNMBPQ6XZF7 1577 aa9.21□□□□□ -0.93
BEST1-202ENST00000449131 MYOM3Q5VTT5 1437 aa9.21□□□□□ -0.94
BEST1-202ENST00000449131 MLECQ14165 292 aa9.21□□□□□ -0.94
BEST1-202ENST00000449131 RRBP1Q9P2E9 1410 aaKnown RBP9.21□□□□□ -0.94
BEST1-202ENST00000449131 ERICH3Q5RHP9 1530 aa9.21□□□□□ -0.94
BEST1-202ENST00000449131 EXOC6Q8TAG9 804 aa9.2□□□□□ -0.94
BEST1-202ENST00000449131 ZNF608Q9ULD9 1512 aaPredicted RBP9.2□□□□□ -0.94
BEST1-202ENST00000449131 USP47Q96K76 1375 aa9.2□□□□□ -0.94
BEST1-202ENST00000449131 MSH5O43196 834 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 UACAQ9BZF9 1416 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 SPAG9O60271 1321 aaKnown RBP9.19□□□□□ -0.94
BEST1-202ENST00000449131 PAK3O75914 559 aaPredicted RBP9.19□□□□□ -0.94
BEST1-202ENST00000449131 IPO9Q96P70 1041 aaKnown RBP9.19□□□□□ -0.94
BEST1-202ENST00000449131 ARID3AQ99856 593 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 WASHC2AQ641Q2 1341 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 TCERG1O14776 1098 aaKnown RBP9.19□□□□□ -0.94
BEST1-202ENST00000449131 MS4A1P11836 297 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 PANK3Q9H999 370 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 U2AF1L5P0DN76 240 aaPredicted RBP9.19□□□□□ -0.94
BEST1-202ENST00000449131 U2AF1Q01081 240 aaKnown RBP eCLIP9.19□□□□□ -0.94
BEST1-202ENST00000449131 CCDC146Q8IYE0 955 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 KIF15Q9NS87 1388 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 MYBBP1AQ9BQG0 1328 aaKnown RBP9.18□□□□□ -0.94
BEST1-202ENST00000449131 ZBED9Q6R2W3 1325 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 GOLGA2Q08379 1002 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 CASKIN1Q8WXD9 1431 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 SLKQ9H2G2 1235 aaPredicted RBP9.18□□□□□ -0.94
BEST1-202ENST00000449131 LAMC3Q9Y6N6 1575 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 ABCA10Q8WWZ4 1543 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 PDE3BQ13370 1112 aa9.17□□□□□ -0.94
BEST1-202ENST00000449131 SOX12O15370 315 aa9.17□□□□□ -0.94
BEST1-202ENST00000449131 CCDC144AA2RUR9 1427 aa9.17□□□□□ -0.94
BEST1-202ENST00000449131 NCOA2Q15596 1464 aa9.16□□□□□ -0.94
BEST1-202ENST00000449131 GOLGA6L22H0YM25 854 aa9.16□□□□□ -0.94
BEST1-202ENST00000449131 NCLP19338 710 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms