RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 NISCHQ9Y2I1 1504 aa13.01□□□□□ -0.33
BEST1-202ENST00000449131 DCAF8L2P0C7V8 631 aa12.5□□□□□ -0.41
BEST1-202ENST00000449131 SUPT5HO00267 1087 aaKnown RBP12.11□□□□□ -0.47
BEST1-202ENST00000449131 SHROOM4Q9ULL8 1493 aa12□□□□□ -0.49
BEST1-202ENST00000449131 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
BEST1-202ENST00000449131 PCGF6Q9BYE7 350 aa11.55□□□□□ -0.56
BEST1-202ENST00000449131 SLC24A1O60721 1099 aa11.46□□□□□ -0.57
BEST1-202ENST00000449131 FAM9AQ8IZU1 332 aaPredicted RBP11.37□□□□□ -0.59
BEST1-202ENST00000449131 TTBK1Q5TCY1 1321 aaPredicted RBP11.27□□□□□ -0.6
BEST1-202ENST00000449131 PPARGC1BQ86YN6 1023 aaKnown RBP11.22□□□□□ -0.61
BEST1-202ENST00000449131 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
BEST1-202ENST00000449131 CHIC1Q5VXU3 224 aa11.15□□□□□ -0.62
BEST1-202ENST00000449131 LOC105371045A0A1W2PR82 267 aa11.15□□□□□ -0.62
BEST1-202ENST00000449131 APLP2Q06481 763 aa11.12□□□□□ -0.63
BEST1-202ENST00000449131 HRCP23327 699 aa11.12□□□□□ -0.63
BEST1-202ENST00000449131 RANGAP1P46060 587 aaPredicted RBP11.01□□□□□ -0.65
BEST1-202ENST00000449131 ZEB1P37275 1124 aaPredicted RBP10.98□□□□□ -0.65
BEST1-202ENST00000449131 CCER1Q8TC90 406 aaPredicted RBP10.97□□□□□ -0.65
BEST1-202ENST00000449131 ABCC9O60706 1549 aa10.96□□□□□ -0.65
BEST1-202ENST00000449131 UBTFP17480 764 aaKnown RBP10.95□□□□□ -0.66
BEST1-202ENST00000449131 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
BEST1-202ENST00000449131 TRIM26Q12899 539 aaPredicted RBP10.9□□□□□ -0.66
BEST1-202ENST00000449131 YTHDC1Q96MU7 727 aaKnown RBP10.88□□□□□ -0.67
BEST1-202ENST00000449131 ZCCHC6Q5VYS8 1495 aaKnown RBP10.86□□□□□ -0.67
BEST1-202ENST00000449131 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
BEST1-202ENST00000449131 CENPBP07199 599 aaPredicted RBP10.81□□□□□ -0.68
BEST1-202ENST00000449131 ATP1B4Q9UN42 357 aaPredicted RBP10.79□□□□□ -0.68
BEST1-202ENST00000449131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.75□□□□□ -0.69
BEST1-202ENST00000449131 PABPN1Q86U42 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
BEST1-202ENST00000449131 MYT1Q01538 1121 aa10.62□□□□□ -0.71
BEST1-202ENST00000449131 HNRNPUL2Q1KMD3 747 aaKnown RBP10.62□□□□□ -0.71
BEST1-202ENST00000449131 SCRIBQ14160 1630 aa10.62□□□□□ -0.71
BEST1-202ENST00000449131 ITGAEP38570 1179 aa10.58□□□□□ -0.72
BEST1-202ENST00000449131 MYO15BQ96JP2 1530 aa10.56□□□□□ -0.72
BEST1-202ENST00000449131 DIEXFQ68CQ4 756 aaKnown RBP10.54□□□□□ -0.72
BEST1-202ENST00000449131 PLPPR3Q6T4P5 718 aa10.54□□□□□ -0.72
BEST1-202ENST00000449131 GTF3C3Q9Y5Q9 886 aa10.52□□□□□ -0.73
BEST1-202ENST00000449131 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
BEST1-202ENST00000449131 NEFLP07196 543 aa10.46□□□□□ -0.74
BEST1-202ENST00000449131 AEBP2Q6ZN18 517 aaPredicted RBP10.42□□□□□ -0.74
BEST1-202ENST00000449131 SCAF1Q9H7N4 1312 aaKnown RBP10.41□□□□□ -0.74
BEST1-202ENST00000449131 ERICH6Q7L0X2 663 aa10.4□□□□□ -0.74
BEST1-202ENST00000449131 DCAF1Q9Y4B6 1507 aa10.37□□□□□ -0.75
BEST1-202ENST00000449131 NEUROD1Q13562 356 aa10.36□□□□□ -0.75
BEST1-202ENST00000449131 ACIN1Q9UKV3 1341 aaKnown RBP10.36□□□□□ -0.75
BEST1-202ENST00000449131 CSRNP3Q8WYN3 585 aa10.36□□□□□ -0.75
BEST1-202ENST00000449131 CECR2Q9BXF3 1484 aa10.35□□□□□ -0.75
BEST1-202ENST00000449131 CNGB1Q14028 1251 aaPredicted RBP10.34□□□□□ -0.75
BEST1-202ENST00000449131 RSF1Q96T23 1441 aaPredicted RBP10.33□□□□□ -0.76
BEST1-202ENST00000449131 BCANQ96GW7 911 aa10.33□□□□□ -0.76
BEST1-202ENST00000449131 FAM50AQ14320 339 aaKnown RBP10.32□□□□□ -0.76
BEST1-202ENST00000449131 POLR3GLQ9BT43 218 aa10.31□□□□□ -0.76
BEST1-202ENST00000449131 NACADO15069 1562 aa10.29□□□□□ -0.76
BEST1-202ENST00000449131 RB1CC1Q8TDY2 1594 aa10.28□□□□□ -0.76
BEST1-202ENST00000449131 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
BEST1-202ENST00000449131 P3H3Q8IVL6 736 aa10.2□□□□□ -0.78
BEST1-202ENST00000449131 MROH2BQ7Z745 1585 aa10.19□□□□□ -0.78
BEST1-202ENST00000449131 TRIM52Q96A61 297 aa10.19□□□□□ -0.78
BEST1-202ENST00000449131 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
BEST1-202ENST00000449131 MYT1LQ9UL68 1186 aa10.18□□□□□ -0.78
BEST1-202ENST00000449131 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
BEST1-202ENST00000449131 PRKCSHP14314 528 aaPredicted RBP10.16□□□□□ -0.78
BEST1-202ENST00000449131 MIER1Q8N108 512 aa10.15□□□□□ -0.78
BEST1-202ENST00000449131 WIZO95785 1651 aa10.09□□□□□ -0.79
BEST1-202ENST00000449131 ANP32CO43423 234 aa10.09□□□□□ -0.79
BEST1-202ENST00000449131 ARID3CA6NKF2 412 aa10.08□□□□□ -0.8
BEST1-202ENST00000449131 ZNF326Q5BKZ1 582 aaKnown RBP10.06□□□□□ -0.8
BEST1-202ENST00000449131 FBLN2P98095 1184 aa10.05□□□□□ -0.8
BEST1-202ENST00000449131 HIRIP3Q9BW71 556 aaPredicted RBP10.05□□□□□ -0.8
BEST1-202ENST00000449131 KCNA4P22459 653 aa10.04□□□□□ -0.8
BEST1-202ENST00000449131 BAZ1AQ9NRL2 1556 aaPredicted RBP10.02□□□□□ -0.81
BEST1-202ENST00000449131 CLIP1P30622 1438 aa10□□□□□ -0.81
BEST1-202ENST00000449131 DDX10Q13206 875 aaKnown RBP10□□□□□ -0.81
BEST1-202ENST00000449131 FKBP8Q14318 412 aa10□□□□□ -0.81
BEST1-202ENST00000449131 NCBP3Q53F19 620 aaKnown RBP10□□□□□ -0.81
BEST1-202ENST00000449131 CEP162Q5TB80 1403 aa9.99□□□□□ -0.81
BEST1-202ENST00000449131 SLC4A1APQ9BWU0 796 aaKnown RBP9.98□□□□□ -0.81
BEST1-202ENST00000449131 CCDC88BA6NC98 1476 aa9.96□□□□□ -0.81
BEST1-202ENST00000449131 ZNF777Q9ULD5 760 aaPredicted RBP9.95□□□□□ -0.82
BEST1-202ENST00000449131 EEA1Q15075 1411 aa9.95□□□□□ -0.82
BEST1-202ENST00000449131 WRNQ14191 1432 aaPredicted RBP eCLIP9.94□□□□□ -0.82
BEST1-202ENST00000449131 ABCC8Q09428 1581 aa9.94□□□□□ -0.82
BEST1-202ENST00000449131 GOLGA3Q08378 1498 aa9.94□□□□□ -0.82
BEST1-202ENST00000449131 PHF23Q9BUL5 403 aaPredicted RBP9.93□□□□□ -0.82
BEST1-202ENST00000449131 IRX6P78412 446 aaPredicted RBP9.93□□□□□ -0.82
BEST1-202ENST00000449131 TONSLQ96HA7 1378 aa9.93□□□□□ -0.82
BEST1-202ENST00000449131 TNIKQ9UKE5 1360 aa9.92□□□□□ -0.82
BEST1-202ENST00000449131 BAZ1BQ9UIG0 1483 aaKnown RBP9.92□□□□□ -0.82
BEST1-202ENST00000449131 SENP3-EIF4A1A0A087X0R7 540 aa9.91□□□□□ -0.82
BEST1-202ENST00000449131 CHIC2Q9UKJ5 165 aa9.91□□□□□ -0.82
BEST1-202ENST00000449131 CDK11AQ9UQ88 783 aaPredicted RBP9.91□□□□□ -0.82
BEST1-202ENST00000449131 SMARCA4P51532 1647 aa9.9□□□□□ -0.82
BEST1-202ENST00000449131 CLSPNQ9HAW4 1339 aa9.88□□□□□ -0.83
BEST1-202ENST00000449131 TULP1O00294 542 aaPredicted RBP9.88□□□□□ -0.83
BEST1-202ENST00000449131 SOGA1O94964 1423 aa9.88□□□□□ -0.83
BEST1-202ENST00000449131 HNRNPUQ00839 825 aaKnown RBP eCLIP9.86□□□□□ -0.83
BEST1-202ENST00000449131 RTL5Q5HYW3 569 aaPredicted RBP9.86□□□□□ -0.83
BEST1-202ENST00000449131 MTUS2Q5JR59 1369 aa9.85□□□□□ -0.83
BEST1-202ENST00000449131 CEP164Q9UPV0 1460 aa9.84□□□□□ -0.83
BEST1-202ENST00000449131 BICRAQ9NZM4 1560 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms