RNA–Protein interactions for RNA: ENST00000436949.5

SEMA3A-204, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3A, Length 2,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-204ENST00000436949 MSH5O43196 834 aa9.38□□□□□ -0.91
SEMA3A-204ENST00000436949 CFAP43Q8NDM7 1665 aa9.37□□□□□ -0.91
SEMA3A-204ENST00000436949 CCDC18Q5T9S5 1454 aa9.37□□□□□ -0.91
SEMA3A-204ENST00000436949 CHIC2Q9UKJ5 165 aa9.37□□□□□ -0.91
SEMA3A-204ENST00000436949 FGD6Q6ZV73 1430 aa9.37□□□□□ -0.91
SEMA3A-204ENST00000436949 TSPOAP1O95153 1857 aa9.36□□□□□ -0.91
SEMA3A-204ENST00000436949 CCDC184Q52MB2 194 aa9.36□□□□□ -0.91
SEMA3A-204ENST00000436949 RRP7BPQ9NSQ0 103 aa9.36□□□□□ -0.91
SEMA3A-204ENST00000436949 MTUS2Q5JR59 1369 aa9.36□□□□□ -0.91
SEMA3A-204ENST00000436949 CASKIN1Q8WXD9 1431 aa9.36□□□□□ -0.91
SEMA3A-204ENST00000436949 BCL11AQ9H165 835 aa9.35□□□□□ -0.91
SEMA3A-204ENST00000436949 FYCO1Q9BQS8 1478 aa9.34□□□□□ -0.91
SEMA3A-204ENST00000436949 WASHC2AQ641Q2 1341 aa9.34□□□□□ -0.91
SEMA3A-204ENST00000436949 HSPA5P11021 654 aaKnown RBP9.33□□□□□ -0.92
SEMA3A-204ENST00000436949 FOXD1Q16676 465 aa9.33□□□□□ -0.92
SEMA3A-204ENST00000436949 ARID3CA6NKF2 412 aa9.33□□□□□ -0.92
SEMA3A-204ENST00000436949 FBXO41Q8TF61 875 aa9.33□□□□□ -0.92
SEMA3A-204ENST00000436949 ASXL2Q76L83 1435 aa9.33□□□□□ -0.92
SEMA3A-204ENST00000436949 UACAQ9BZF9 1416 aa9.33□□□□□ -0.92
SEMA3A-204ENST00000436949 KDM5BQ9UGL1 1544 aa9.32□□□□□ -0.92
SEMA3A-204ENST00000436949 HFM1A2PYH4 1435 aa9.32□□□□□ -0.92
SEMA3A-204ENST00000436949 NAIPQ13075 1403 aa9.32□□□□□ -0.92
SEMA3A-204ENST00000436949 CARMIL2Q6F5E8 1435 aa9.32□□□□□ -0.92
SEMA3A-204ENST00000436949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.32□□□□□ -0.92
SEMA3A-204ENST00000436949 EPRSP07814 1512 aaKnown RBP9.31□□□□□ -0.92
SEMA3A-204ENST00000436949 PTPRGP23470 1445 aa9.31□□□□□ -0.92
SEMA3A-204ENST00000436949 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
SEMA3A-204ENST00000436949 CNGB1Q14028 1251 aaPredicted RBP9.3□□□□□ -0.92
SEMA3A-204ENST00000436949 PTPN23Q9H3S7 1636 aa9.3□□□□□ -0.92
SEMA3A-204ENST00000436949 FAM9BQ8IZU0 186 aa9.3□□□□□ -0.92
SEMA3A-204ENST00000436949 MAGI3Q5TCQ9 1506 aa9.29□□□□□ -0.92
SEMA3A-204ENST00000436949 NCOA2Q15596 1464 aa9.29□□□□□ -0.92
SEMA3A-204ENST00000436949 FMN1Q68DA7 1419 aa9.29□□□□□ -0.92
SEMA3A-204ENST00000436949 SENP3-EIF4A1A0A087X0R7 540 aa9.28□□□□□ -0.92
SEMA3A-204ENST00000436949 CDK11AQ9UQ88 783 aaPredicted RBP9.28□□□□□ -0.92
SEMA3A-204ENST00000436949 EFCAB5A4FU69 1503 aa9.28□□□□□ -0.92
SEMA3A-204ENST00000436949 MYOM3Q5VTT5 1437 aa9.27□□□□□ -0.93
SEMA3A-204ENST00000436949 COL17A1Q9UMD9 1497 aaPredicted RBP9.27□□□□□ -0.93
SEMA3A-204ENST00000436949 L3MBTL2Q969R5 705 aa9.27□□□□□ -0.93
SEMA3A-204ENST00000436949 IQGAP2Q13576 1575 aa9.27□□□□□ -0.93
SEMA3A-204ENST00000436949 DENND4BO75064 1496 aaPredicted RBP9.27□□□□□ -0.93
SEMA3A-204ENST00000436949 EIF4G2P78344 907 aaKnown RBP eCLIP9.26□□□□□ -0.93
SEMA3A-204ENST00000436949 B4GALNT3Q6L9W6 998 aa9.26□□□□□ -0.93
SEMA3A-204ENST00000436949 ZCCHC11Q5TAX3 1644 aaKnown RBP9.25□□□□□ -0.93
SEMA3A-204ENST00000436949 UGGT2Q9NYU1 1516 aa9.25□□□□□ -0.93
SEMA3A-204ENST00000436949 LRRIQ1Q96JM4 1722 aa9.25□□□□□ -0.93
SEMA3A-204ENST00000436949 MPHOSPH9Q99550 1183 aa9.24□□□□□ -0.93
SEMA3A-204ENST00000436949 MRS2Q9HD23 443 aa9.24□□□□□ -0.93
SEMA3A-204ENST00000436949 NBPF8Q3BBV2 869 aa9.24□□□□□ -0.93
SEMA3A-204ENST00000436949 PRKRIP1Q9H875 184 aaPredicted RBP9.23□□□□□ -0.93
SEMA3A-204ENST00000436949 WDR7Q9Y4E6 1490 aa9.23□□□□□ -0.93
SEMA3A-204ENST00000436949 ADAMTSL3P82987 1691 aa9.23□□□□□ -0.93
SEMA3A-204ENST00000436949 ARAP3Q8WWN8 1544 aa9.23□□□□□ -0.93
SEMA3A-204ENST00000436949 CTTNBP2Q8WZ74 1663 aa9.23□□□□□ -0.93
SEMA3A-204ENST00000436949 DISP1Q96F81 1524 aa9.22□□□□□ -0.93
SEMA3A-204ENST00000436949 ERICH6Q7L0X2 663 aa9.22□□□□□ -0.93
SEMA3A-204ENST00000436949 FANCIQ9NVI1 1328 aa9.22□□□□□ -0.93
SEMA3A-204ENST00000436949 PPP4R2Q9NY27 417 aa9.21□□□□□ -0.93
SEMA3A-204ENST00000436949 CNTLNQ9NXG0 1405 aa9.21□□□□□ -0.93
SEMA3A-204ENST00000436949 POLR3GLQ9BT43 218 aa9.21□□□□□ -0.94
SEMA3A-204ENST00000436949 CCDC7Q96M83 1385 aa9.21□□□□□ -0.94
SEMA3A-204ENST00000436949 KIAA0556O60303 1618 aa9.2□□□□□ -0.94
SEMA3A-204ENST00000436949 ZNF644Q9H582 1327 aaPredicted RBP9.19□□□□□ -0.94
SEMA3A-204ENST00000436949 SUPT6HQ7KZ85 1726 aaKnown RBP9.19□□□□□ -0.94
SEMA3A-204ENST00000436949 SAMD9Q5K651 1589 aa9.19□□□□□ -0.94
SEMA3A-204ENST00000436949 KIF7Q2M1P5 1343 aa9.19□□□□□ -0.94
SEMA3A-204ENST00000436949 EHBP1L1Q8N3D4 1523 aa9.18□□□□□ -0.94
SEMA3A-204ENST00000436949 NCOA1Q15788 1441 aa9.18□□□□□ -0.94
SEMA3A-204ENST00000436949 ZNF326Q5BKZ1 582 aaKnown RBP9.18□□□□□ -0.94
SEMA3A-204ENST00000436949 CDK13Q14004 1512 aaKnown RBP9.17□□□□□ -0.94
SEMA3A-204ENST00000436949 PTPRMP28827 1452 aa9.16□□□□□ -0.94
SEMA3A-204ENST00000436949 ZBED9Q6R2W3 1325 aa9.16□□□□□ -0.94
SEMA3A-204ENST00000436949 SLC4A1APQ9BWU0 796 aaKnown RBP9.16□□□□□ -0.94
SEMA3A-204ENST00000436949 ABCA8O94911 1581 aa9.16□□□□□ -0.94
SEMA3A-204ENST00000436949 BCORL1Q5H9F3 1711 aa9.15□□□□□ -0.94
SEMA3A-204ENST00000436949 AKNAQ7Z591 1439 aa9.15□□□□□ -0.94
SEMA3A-204ENST00000436949 CD109Q6YHK3 1445 aa9.15□□□□□ -0.94
SEMA3A-204ENST00000436949 ANKRD30BQ9BXX2 1392 aa9.15□□□□□ -0.95
SEMA3A-204ENST00000436949 TCOF1Q13428 1488 aaKnown RBP9.14□□□□□ -0.95
SEMA3A-204ENST00000436949 PAK3O75914 559 aaPredicted RBP9.14□□□□□ -0.95
SEMA3A-204ENST00000436949 NBR1Q14596 966 aa9.14□□□□□ -0.95
SEMA3A-204ENST00000436949 ERICH6BQ5W0A0 696 aa9.14□□□□□ -0.95
SEMA3A-204ENST00000436949 HECW1Q76N89 1606 aa9.13□□□□□ -0.95
SEMA3A-204ENST00000436949 NEO1Q92859 1461 aa9.13□□□□□ -0.95
SEMA3A-204ENST00000436949 ABCA9Q8IUA7 1624 aa9.13□□□□□ -0.95
SEMA3A-204ENST00000436949 LMTK3Q96Q04 1460 aa9.13□□□□□ -0.95
SEMA3A-204ENST00000436949 SPATA31E1Q6ZUB1 1445 aa9.12□□□□□ -0.95
SEMA3A-204ENST00000436949 GCC2Q8IWJ2 1684 aa9.12□□□□□ -0.95
SEMA3A-204ENST00000436949 RPRD2Q5VT52 1461 aaKnown RBP9.11□□□□□ -0.95
SEMA3A-204ENST00000436949 ABCC5O15440 1437 aa9.1□□□□□ -0.95
SEMA3A-204ENST00000436949 DAPK1P53355 1430 aa9.1□□□□□ -0.95
SEMA3A-204ENST00000436949 ARHGEF40Q8TER5 1519 aa9.1□□□□□ -0.95
SEMA3A-204ENST00000436949 DEKP35659 375 aaKnown RBP9.1□□□□□ -0.95
SEMA3A-204ENST00000436949 ZNF777Q9ULD5 760 aaPredicted RBP9.1□□□□□ -0.95
SEMA3A-204ENST00000436949 DHX29Q7Z478 1369 aaKnown RBP9.09□□□□□ -0.95
SEMA3A-204ENST00000436949 CCDC136Q96JN2 1154 aa9.09□□□□□ -0.95
SEMA3A-204ENST00000436949 MIA2Q96PC5 1412 aa9.09□□□□□ -0.95
SEMA3A-204ENST00000436949 NOP58Q9Y2X3 529 aaKnown RBP9.09□□□□□ -0.95
SEMA3A-204ENST00000436949 SALL2Q9Y467 1007 aaPredicted RBP9.08□□□□□ -0.96
SEMA3A-204ENST00000436949 MADDQ8WXG6 1647 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 1037.7 ms