RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 MAGI3Q5TCQ9 1506 aa12.08□□□□□ -0.48
VPS8-204ENST00000424463 NCOA2Q15596 1464 aa12.07□□□□□ -0.48
VPS8-204ENST00000424463 CDK13Q14004 1512 aaKnown RBP12.07□□□□□ -0.48
VPS8-204ENST00000424463 RAB3GAP2Q9H2M9 1393 aa12.07□□□□□ -0.48
VPS8-204ENST00000424463 EPRSP07814 1512 aaKnown RBP12.06□□□□□ -0.48
VPS8-204ENST00000424463 FGD6Q6ZV73 1430 aa12.06□□□□□ -0.48
VPS8-204ENST00000424463 KIAA0556O60303 1618 aa12.06□□□□□ -0.48
VPS8-204ENST00000424463 NUP160Q12769 1436 aa12.06□□□□□ -0.48
VPS8-204ENST00000424463 ZMYND15Q9H091 742 aa12.05□□□□□ -0.48
VPS8-204ENST00000424463 CCDC18Q5T9S5 1454 aa12.04□□□□□ -0.48
VPS8-204ENST00000424463 SETD5Q9C0A6 1442 aa12.04□□□□□ -0.48
VPS8-204ENST00000424463 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
VPS8-204ENST00000424463 HECW1Q76N89 1606 aa12.04□□□□□ -0.48
VPS8-204ENST00000424463 PAXIP1Q6ZW49 1069 aaPredicted RBP12.03□□□□□ -0.48
VPS8-204ENST00000424463 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
VPS8-204ENST00000424463 MYOM3Q5VTT5 1437 aa12.02□□□□□ -0.48
VPS8-204ENST00000424463 DEKP35659 375 aaKnown RBP12.02□□□□□ -0.49
VPS8-204ENST00000424463 EHBP1L1Q8N3D4 1523 aa12.02□□□□□ -0.49
VPS8-204ENST00000424463 TSHZ2Q9NRE2 1034 aa12.01□□□□□ -0.49
VPS8-204ENST00000424463 NUP153P49790 1475 aaKnown RBP12.01□□□□□ -0.49
VPS8-204ENST00000424463 PTPRKQ15262 1439 aa12.01□□□□□ -0.49
VPS8-204ENST00000424463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.01□□□□□ -0.49
VPS8-204ENST00000424463 PLB1Q6P1J6 1458 aa12.01□□□□□ -0.49
VPS8-204ENST00000424463 ZBTB4Q9P1Z0 1013 aaPredicted RBP12□□□□□ -0.49
VPS8-204ENST00000424463 SUPT6HQ7KZ85 1726 aaKnown RBP12□□□□□ -0.49
VPS8-204ENST00000424463 CARMIL2Q6F5E8 1435 aa12□□□□□ -0.49
VPS8-204ENST00000424463 ARHGEF11O15085 1522 aa11.98□□□□□ -0.49
VPS8-204ENST00000424463 CHIC2Q9UKJ5 165 aa11.98□□□□□ -0.49
VPS8-204ENST00000424463 RAPGEF6Q8TEU7 1601 aa11.98□□□□□ -0.49
VPS8-204ENST00000424463 ZNF316A6NFI3 1004 aaPredicted RBP11.97□□□□□ -0.49
VPS8-204ENST00000424463 PRG4Q92954 1404 aaPredicted RBP11.96□□□□□ -0.49
VPS8-204ENST00000424463 CDK11AQ9UQ88 783 aaPredicted RBP11.96□□□□□ -0.5
VPS8-204ENST00000424463 DIEXFQ68CQ4 756 aaKnown RBP11.94□□□□□ -0.5
VPS8-204ENST00000424463 RRP7BPQ9NSQ0 103 aa11.94□□□□□ -0.5
VPS8-204ENST00000424463 ZNF644Q9H582 1327 aaPredicted RBP11.94□□□□□ -0.5
VPS8-204ENST00000424463 PTPN23Q9H3S7 1636 aa11.94□□□□□ -0.5
VPS8-204ENST00000424463 TMEM132AQ24JP5 1023 aa11.93□□□□□ -0.5
VPS8-204ENST00000424463 SIN3AQ96ST3 1273 aa11.93□□□□□ -0.5
VPS8-204ENST00000424463 MAPKBP1O60336 1514 aa11.93□□□□□ -0.5
VPS8-204ENST00000424463 CDK11BP21127 795 aaKnown RBP11.92□□□□□ -0.5
VPS8-204ENST00000424463 ZNF326Q5BKZ1 582 aaKnown RBP11.92□□□□□ -0.5
VPS8-204ENST00000424463 CHD1O14646 1710 aa11.92□□□□□ -0.5
VPS8-204ENST00000424463 PTPRGP23470 1445 aa11.91□□□□□ -0.5
VPS8-204ENST00000424463 TCOF1Q13428 1488 aaKnown RBP11.91□□□□□ -0.5
VPS8-204ENST00000424463 HFM1A2PYH4 1435 aa11.9□□□□□ -0.5
VPS8-204ENST00000424463 NAIPQ13075 1403 aa11.9□□□□□ -0.5
VPS8-204ENST00000424463 GLIPR1L2Q4G1C9 344 aa11.9□□□□□ -0.5
VPS8-204ENST00000424463 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.9□□□□□ -0.5
VPS8-204ENST00000424463 MIA2Q96PC5 1412 aa11.9□□□□□ -0.5
VPS8-204ENST00000424463 TROQ12816 1431 aaPredicted RBP11.89□□□□□ -0.51
VPS8-204ENST00000424463 PLEKHD1A6NEE1 506 aa11.89□□□□□ -0.51
VPS8-204ENST00000424463 ATP10BO94823 1461 aa11.89□□□□□ -0.51
VPS8-204ENST00000424463 NAP1L5Q96NT1 182 aaPredicted RBP11.88□□□□□ -0.51
VPS8-204ENST00000424463 ZNF777Q9ULD5 760 aaPredicted RBP11.88□□□□□ -0.51
VPS8-204ENST00000424463 ABCA8O94911 1581 aa11.88□□□□□ -0.51
VPS8-204ENST00000424463 HSP90B1P14625 803 aaKnown RBP11.87□□□□□ -0.51
VPS8-204ENST00000424463 CFDP1Q9UEE9 299 aaPredicted RBP11.87□□□□□ -0.51
VPS8-204ENST00000424463 BCCIPQ9P287 314 aaKnown RBP eCLIP11.87□□□□□ -0.51
VPS8-204ENST00000424463 ERCC6L2Q5T890 1561 aa11.86□□□□□ -0.51
VPS8-204ENST00000424463 KIF14Q15058 1648 aa11.84□□□□□ -0.51
VPS8-204ENST00000424463 GPATCH8Q9UKJ3 1502 aaKnown RBP11.84□□□□□ -0.51
VPS8-204ENST00000424463 ABCC5O15440 1437 aa11.84□□□□□ -0.51
VPS8-204ENST00000424463 TRIM52Q96A61 297 aa11.84□□□□□ -0.51
VPS8-204ENST00000424463 DAPK1P53355 1430 aa11.83□□□□□ -0.52
VPS8-204ENST00000424463 UACAQ9BZF9 1416 aa11.83□□□□□ -0.52
VPS8-204ENST00000424463 PPP6R1Q9UPN7 881 aa11.82□□□□□ -0.52
VPS8-204ENST00000424463 KDM6BO15054 1643 aa11.81□□□□□ -0.52
VPS8-204ENST00000424463 VSIG10Q8N0Z9 540 aa11.81□□□□□ -0.52
VPS8-204ENST00000424463 SHROOM2Q13796 1616 aa11.81□□□□□ -0.52
VPS8-204ENST00000424463 CAMSAP2Q08AD1 1489 aa11.79□□□□□ -0.52
VPS8-204ENST00000424463 IRX6P78412 446 aaPredicted RBP11.79□□□□□ -0.52
VPS8-204ENST00000424463 ABCC10Q5T3U5 1492 aa11.78□□□□□ -0.52
VPS8-204ENST00000424463 FOXD1Q16676 465 aa11.78□□□□□ -0.52
VPS8-204ENST00000424463 IGSF3O75054 1194 aa11.77□□□□□ -0.52
VPS8-204ENST00000424463 MIER1Q8N108 512 aa11.77□□□□□ -0.52
VPS8-204ENST00000424463 MPHOSPH9Q99550 1183 aa11.77□□□□□ -0.52
VPS8-204ENST00000424463 ADCY10Q96PN6 1610 aa11.77□□□□□ -0.53
VPS8-204ENST00000424463 CLASP1Q7Z460 1538 aa11.77□□□□□ -0.53
VPS8-204ENST00000424463 AKNAQ7Z591 1439 aa11.77□□□□□ -0.53
VPS8-204ENST00000424463 ROCK1Q13464 1354 aa11.77□□□□□ -0.53
VPS8-204ENST00000424463 PPP1R15AO75807 674 aaPredicted RBP11.77□□□□□ -0.53
VPS8-204ENST00000424463 HNRNPMP52272 730 aaKnown RBP eCLIP11.77□□□□□ -0.53
VPS8-204ENST00000424463 KCNH8Q96L42 1107 aa11.77□□□□□ -0.53
VPS8-204ENST00000424463 NAP1L2Q9ULW6 460 aaPredicted RBP11.77□□□□□ -0.53
VPS8-204ENST00000424463 DNMT1P26358 1616 aaKnown RBP11.76□□□□□ -0.53
VPS8-204ENST00000424463 DENND4BO75064 1496 aaPredicted RBP11.75□□□□□ -0.53
VPS8-204ENST00000424463 GCC2Q8IWJ2 1684 aa11.74□□□□□ -0.53
VPS8-204ENST00000424463 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
VPS8-204ENST00000424463 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
VPS8-204ENST00000424463 ITSN2Q9NZM3 1697 aa11.73□□□□□ -0.53
VPS8-204ENST00000424463 TONSLQ96HA7 1378 aa11.72□□□□□ -0.53
VPS8-204ENST00000424463 CDC42BPAQ5VT25 1732 aa11.72□□□□□ -0.53
VPS8-204ENST00000424463 HIRIP3Q9BW71 556 aaPredicted RBP11.72□□□□□ -0.53
VPS8-204ENST00000424463 ABCC2Q92887 1545 aa11.72□□□□□ -0.53
VPS8-204ENST00000424463 TSPY4P0CV99 314 aa11.7□□□□□ -0.54
VPS8-204ENST00000424463 TSPY10P0CW01 314 aa11.7□□□□□ -0.54
VPS8-204ENST00000424463 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
VPS8-204ENST00000424463 CHRM1P11229 460 aaPredicted RBP11.7□□□□□ -0.54
VPS8-204ENST00000424463 ANKRD30AQ9BXX3 1397 aa11.69□□□□□ -0.54
VPS8-204ENST00000424463 IL27Q8NEV9 243 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms