RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 NISCHQ9Y2I1 1504 aa17.84■□□□□ 0.45
VPS8-204ENST00000424463 PELP1Q8IZL8 1130 aaKnown RBP15.43■□□□□ 0.06
VPS8-204ENST00000424463 MYT1Q01538 1121 aa15.39■□□□□ 0.05
VPS8-204ENST00000424463 SLC24A1O60721 1099 aa15.35■□□□□ 0.05
VPS8-204ENST00000424463 CCDC180Q9P1Z9 1646 aa15.29■□□□□ 0.04
VPS8-204ENST00000424463 TTBK1Q5TCY1 1321 aaPredicted RBP15.07■□□□□ 0
VPS8-204ENST00000424463 ZCCHC6Q5VYS8 1495 aaKnown RBP14.99□□□□□ -0.01
VPS8-204ENST00000424463 SHROOM4Q9ULL8 1493 aa14.95□□□□□ -0.02
VPS8-204ENST00000424463 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
VPS8-204ENST00000424463 PRKCSHP14314 528 aaPredicted RBP14.89□□□□□ -0.03
VPS8-204ENST00000424463 APLP2Q06481 763 aa14.72□□□□□ -0.05
VPS8-204ENST00000424463 DCAF1Q9Y4B6 1507 aa14.63□□□□□ -0.07
VPS8-204ENST00000424463 ABCC9O60706 1549 aa14.55□□□□□ -0.08
VPS8-204ENST00000424463 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
VPS8-204ENST00000424463 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
VPS8-204ENST00000424463 DAXXQ9UER7 740 aaPredicted RBP14.46□□□□□ -0.1
VPS8-204ENST00000424463 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
VPS8-204ENST00000424463 SCRIBQ14160 1630 aa14.3□□□□□ -0.12
VPS8-204ENST00000424463 NACADO15069 1562 aa14.26□□□□□ -0.13
VPS8-204ENST00000424463 RB1CC1Q8TDY2 1594 aa14.11□□□□□ -0.15
VPS8-204ENST00000424463 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
VPS8-204ENST00000424463 BCL11AQ9H165 835 aa13.98□□□□□ -0.17
VPS8-204ENST00000424463 CECR2Q9BXF3 1484 aa13.96□□□□□ -0.17
VPS8-204ENST00000424463 CHIC1Q5VXU3 224 aa13.91□□□□□ -0.18
VPS8-204ENST00000424463 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
VPS8-204ENST00000424463 MROH2BQ7Z745 1585 aa13.85□□□□□ -0.19
VPS8-204ENST00000424463 UNC13AQ9UPW8 1703 aa13.84□□□□□ -0.19
VPS8-204ENST00000424463 FAM9AQ8IZU1 332 aaPredicted RBP13.79□□□□□ -0.2
VPS8-204ENST00000424463 BICRAQ9NZM4 1560 aa13.75□□□□□ -0.21
VPS8-204ENST00000424463 WIZO95785 1651 aa13.73□□□□□ -0.21
VPS8-204ENST00000424463 EIF5BO60841 1220 aaKnown RBP13.72□□□□□ -0.21
VPS8-204ENST00000424463 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.21
VPS8-204ENST00000424463 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
VPS8-204ENST00000424463 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
VPS8-204ENST00000424463 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
VPS8-204ENST00000424463 TOP2AP11388 1531 aaKnown RBP13.51□□□□□ -0.25
VPS8-204ENST00000424463 LOC105371045A0A1W2PR82 267 aa13.51□□□□□ -0.25
VPS8-204ENST00000424463 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
VPS8-204ENST00000424463 SCAF1Q9H7N4 1312 aaKnown RBP13.45□□□□□ -0.26
VPS8-204ENST00000424463 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
VPS8-204ENST00000424463 SMARCA2P51531 1590 aa13.43□□□□□ -0.26
VPS8-204ENST00000424463 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
VPS8-204ENST00000424463 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
VPS8-204ENST00000424463 EIF4G1Q04637 1599 aaKnown RBP13.36□□□□□ -0.27
VPS8-204ENST00000424463 BAZ1BQ9UIG0 1483 aaKnown RBP13.34□□□□□ -0.27
VPS8-204ENST00000424463 HRCP23327 699 aa13.31□□□□□ -0.28
VPS8-204ENST00000424463 EHMT2Q96KQ7 1210 aa13.31□□□□□ -0.28
VPS8-204ENST00000424463 ABCC8Q09428 1581 aa13.3□□□□□ -0.28
VPS8-204ENST00000424463 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
VPS8-204ENST00000424463 ARXQ96QS3 562 aa13.28□□□□□ -0.28
VPS8-204ENST00000424463 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
VPS8-204ENST00000424463 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
VPS8-204ENST00000424463 AEBP2Q6ZN18 517 aaPredicted RBP13.18□□□□□ -0.3
VPS8-204ENST00000424463 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
VPS8-204ENST00000424463 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
VPS8-204ENST00000424463 UBE2Q2Q8WVN8 375 aa13.15□□□□□ -0.3
VPS8-204ENST00000424463 SOGA1O94964 1423 aa13.13□□□□□ -0.31
VPS8-204ENST00000424463 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
VPS8-204ENST00000424463 CENPBP07199 599 aaPredicted RBP13.12□□□□□ -0.31
VPS8-204ENST00000424463 TIMELESSQ9UNS1 1208 aa13.11□□□□□ -0.31
VPS8-204ENST00000424463 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
VPS8-204ENST00000424463 RUSC2Q8N2Y8 1516 aa13.09□□□□□ -0.31
VPS8-204ENST00000424463 PCGF6Q9BYE7 350 aa13.08□□□□□ -0.32
VPS8-204ENST00000424463 CC2D2AQ9P2K1 1620 aa13.07□□□□□ -0.32
VPS8-204ENST00000424463 SYNJ1O43426 1573 aa13.06□□□□□ -0.32
VPS8-204ENST00000424463 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
VPS8-204ENST00000424463 RANGAP1P46060 587 aaPredicted RBP13.03□□□□□ -0.32
VPS8-204ENST00000424463 CFTRP13569 1480 aa13□□□□□ -0.33
VPS8-204ENST00000424463 EEA1Q15075 1411 aa12.96□□□□□ -0.33
VPS8-204ENST00000424463 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.34
VPS8-204ENST00000424463 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
VPS8-204ENST00000424463 DNAJC5BQ9UF47 199 aa12.94□□□□□ -0.34
VPS8-204ENST00000424463 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
VPS8-204ENST00000424463 PPARGC1BQ86YN6 1023 aaKnown RBP12.92□□□□□ -0.34
VPS8-204ENST00000424463 CUX1P39880 1505 aa12.92□□□□□ -0.34
VPS8-204ENST00000424463 TRIM26Q12899 539 aaPredicted RBP12.92□□□□□ -0.34
VPS8-204ENST00000424463 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
VPS8-204ENST00000424463 BIVM-ERCC5R4GMW8 1640 aa12.87□□□□□ -0.35
VPS8-204ENST00000424463 ANP32EQ9BTT0 268 aa12.87□□□□□ -0.35
VPS8-204ENST00000424463 CEP162Q5TB80 1403 aa12.86□□□□□ -0.35
VPS8-204ENST00000424463 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
VPS8-204ENST00000424463 GOLGA3Q08378 1498 aa12.85□□□□□ -0.35
VPS8-204ENST00000424463 NESP48681 1621 aa12.85□□□□□ -0.35
VPS8-204ENST00000424463 CEP164Q9UPV0 1460 aa12.83□□□□□ -0.36
VPS8-204ENST00000424463 PKNOX2Q96KN3 472 aa12.81□□□□□ -0.36
VPS8-204ENST00000424463 FANCD2Q9BXW9 1451 aa12.81□□□□□ -0.36
VPS8-204ENST00000424463 RAPGEF2Q9Y4G8 1499 aa12.81□□□□□ -0.36
VPS8-204ENST00000424463 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
VPS8-204ENST00000424463 KIF21BO75037 1637 aa12.78□□□□□ -0.36
VPS8-204ENST00000424463 TULP1O00294 542 aaPredicted RBP12.77□□□□□ -0.36
VPS8-204ENST00000424463 KIF27Q86VH2 1401 aa12.76□□□□□ -0.37
VPS8-204ENST00000424463 HOMEZQ8IX15 550 aa12.76□□□□□ -0.37
VPS8-204ENST00000424463 PDIA4P13667 645 aaKnown RBP12.75□□□□□ -0.37
VPS8-204ENST00000424463 FGD5Q6ZNL6 1462 aa12.74□□□□□ -0.37
VPS8-204ENST00000424463 PRXQ9BXM0 1461 aa12.73□□□□□ -0.37
VPS8-204ENST00000424463 CUX2O14529 1486 aa12.72□□□□□ -0.37
VPS8-204ENST00000424463 CLIP1P30622 1438 aa12.71□□□□□ -0.37
VPS8-204ENST00000424463 IGF1RP08069 1367 aa12.7□□□□□ -0.38
VPS8-204ENST00000424463 RAD54L2Q9Y4B4 1467 aa12.69□□□□□ -0.38
VPS8-204ENST00000424463 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms