RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 SLKQ9H2G2 1235 aaPredicted RBP17.97■□□□□ 0.47
CLTCL1-201ENST00000412649 FHOD3Q2V2M9 1422 aa17.96■□□□□ 0.47
CLTCL1-201ENST00000412649 HSP90AA2PQ14568 343 aaPredicted RBP17.96■□□□□ 0.47
CLTCL1-201ENST00000412649 PRXQ9BXM0 1461 aa17.96■□□□□ 0.46
CLTCL1-201ENST00000412649 UBE2Q2Q8WVN8 375 aa17.95■□□□□ 0.46
CLTCL1-201ENST00000412649 MAPKBP1O60336 1514 aa17.95■□□□□ 0.46
CLTCL1-201ENST00000412649 FAM161AQ3B820 660 aa17.95■□□□□ 0.46
CLTCL1-201ENST00000412649 KIF7Q2M1P5 1343 aa17.95■□□□□ 0.46
CLTCL1-201ENST00000412649 BACH2Q9BYV9 841 aa17.94■□□□□ 0.46
CLTCL1-201ENST00000412649 CC2D1BQ5T0F9 858 aaKnown RBP17.94■□□□□ 0.46
CLTCL1-201ENST00000412649 KTN1Q86UP2 1357 aaKnown RBP17.94■□□□□ 0.46
CLTCL1-201ENST00000412649 ROCK2O75116 1388 aaKnown RBP17.93■□□□□ 0.46
CLTCL1-201ENST00000412649 GOLGA6L3A6NEY3 463 aa17.93■□□□□ 0.46
CLTCL1-201ENST00000412649 PLIN1O60240 522 aa17.91■□□□□ 0.46
CLTCL1-201ENST00000412649 NLRP13Q86W25 1043 aa17.91■□□□□ 0.46
CLTCL1-201ENST00000412649 FGD6Q6ZV73 1430 aa17.91■□□□□ 0.46
CLTCL1-201ENST00000412649 MYBBP1AQ9BQG0 1328 aaKnown RBP17.91■□□□□ 0.46
CLTCL1-201ENST00000412649 CENPQQ7L2Z9 268 aaPredicted RBP17.91■□□□□ 0.46
CLTCL1-201ENST00000412649 FAM43AQ8N2R8 423 aa17.91■□□□□ 0.46
CLTCL1-201ENST00000412649 KIF15Q9NS87 1388 aa17.9■□□□□ 0.46
CLTCL1-201ENST00000412649 CRBNQ96SW2 442 aa17.9■□□□□ 0.46
CLTCL1-201ENST00000412649 GZF1Q9H116 711 aaPredicted RBP17.9■□□□□ 0.46
CLTCL1-201ENST00000412649 PKNOX2Q96KN3 472 aa17.89■□□□□ 0.45
CLTCL1-201ENST00000412649 TIAM1Q13009 1591 aa17.88■□□□□ 0.45
CLTCL1-201ENST00000412649 GOLGA6L22H0YM25 854 aa17.88■□□□□ 0.45
CLTCL1-201ENST00000412649 ARID4BQ4LE39 1312 aaPredicted RBP17.87■□□□□ 0.45
CLTCL1-201ENST00000412649 ATAD2BQ9ULI0 1458 aa17.87■□□□□ 0.45
CLTCL1-201ENST00000412649 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
CLTCL1-201ENST00000412649 SPRYD3Q8NCJ5 442 aa17.86■□□□□ 0.45
CLTCL1-201ENST00000412649 TSPY4P0CV99 314 aa17.85■□□□□ 0.45
CLTCL1-201ENST00000412649 TSPY10P0CW01 314 aa17.85■□□□□ 0.45
CLTCL1-201ENST00000412649 FRAT2O75474 233 aaPredicted RBP17.83■□□□□ 0.44
CLTCL1-201ENST00000412649 RGL3Q3MIN7 710 aa17.83■□□□□ 0.44
CLTCL1-201ENST00000412649 USP47Q96K76 1375 aa17.83■□□□□ 0.44
CLTCL1-201ENST00000412649 DCAF11Q8TEB1 546 aa17.83■□□□□ 0.44
CLTCL1-201ENST00000412649 CFDP1Q9UEE9 299 aaPredicted RBP17.81■□□□□ 0.44
CLTCL1-201ENST00000412649 PKD2Q13563 968 aa17.8■□□□□ 0.44
CLTCL1-201ENST00000412649 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
CLTCL1-201ENST00000412649 HSCBQ8IWL3 235 aa17.8■□□□□ 0.44
CLTCL1-201ENST00000412649 MYH16Q9H6N6 1097 aa17.8■□□□□ 0.44
CLTCL1-201ENST00000412649 C11orf95C9JLR9 678 aaPredicted RBP17.79■□□□□ 0.44
CLTCL1-201ENST00000412649 IGF1RP08069 1367 aa17.79■□□□□ 0.44
CLTCL1-201ENST00000412649 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
CLTCL1-201ENST00000412649 MSNP26038 577 aaKnown RBP17.78■□□□□ 0.44
CLTCL1-201ENST00000412649 TNNT2P45379 298 aaPredicted RBP17.77■□□□□ 0.44
CLTCL1-201ENST00000412649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.77■□□□□ 0.44
CLTCL1-201ENST00000412649 PNISRQ8TF01 805 aaKnown RBP17.77■□□□□ 0.43
CLTCL1-201ENST00000412649 NCLP19338 710 aaKnown RBP17.76■□□□□ 0.43
CLTCL1-201ENST00000412649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLTCL1-201ENST00000412649 GOLGA2Q08379 1002 aa17.75■□□□□ 0.43
CLTCL1-201ENST00000412649 MYOM3Q5VTT5 1437 aa17.75■□□□□ 0.43
CLTCL1-201ENST00000412649 HSP90AB1P08238 724 aaKnown RBP17.75■□□□□ 0.43
CLTCL1-201ENST00000412649 TMF1P82094 1093 aa17.75■□□□□ 0.43
CLTCL1-201ENST00000412649 BRD4O60885 1362 aaPredicted RBP17.74■□□□□ 0.43
CLTCL1-201ENST00000412649 CDCA8Q53HL2 280 aa17.73■□□□□ 0.43
CLTCL1-201ENST00000412649 ST20-MTHFSA0A0A6YYL1 179 aa17.73■□□□□ 0.43
CLTCL1-201ENST00000412649 MAP3K1Q13233 1512 aa17.73■□□□□ 0.43
CLTCL1-201ENST00000412649 FTSJ3Q8IY81 847 aaKnown RBP17.72■□□□□ 0.43
CLTCL1-201ENST00000412649 CUX1P39880 1505 aa17.71■□□□□ 0.43
CLTCL1-201ENST00000412649 CASKIN1Q8WXD9 1431 aa17.71■□□□□ 0.43
CLTCL1-201ENST00000412649 MAPK8IP3Q9UPT6 1336 aa17.7■□□□□ 0.42
CLTCL1-201ENST00000412649 NBPF8Q3BBV2 869 aa17.7■□□□□ 0.42
CLTCL1-201ENST00000412649 GBP4Q96PP9 640 aa17.7■□□□□ 0.42
CLTCL1-201ENST00000412649 NEUROD2Q15784 382 aa17.7■□□□□ 0.42
CLTCL1-201ENST00000412649 WASHC2CQ9Y4E1 1318 aa17.69■□□□□ 0.42
CLTCL1-201ENST00000412649 FYCO1Q9BQS8 1478 aa17.69■□□□□ 0.42
CLTCL1-201ENST00000412649 CDCA7LQ96GN5 454 aa17.69■□□□□ 0.42
CLTCL1-201ENST00000412649 PTMAP06454 111 aaKnown RBP17.68■□□□□ 0.42
CLTCL1-201ENST00000412649 NCOA1Q15788 1441 aa17.68■□□□□ 0.42
CLTCL1-201ENST00000412649 DNTTIP2Q5QJE6 756 aaKnown RBP17.68■□□□□ 0.42
CLTCL1-201ENST00000412649 PTMSP20962 102 aa17.66■□□□□ 0.42
CLTCL1-201ENST00000412649 PMFBP1Q8TBY8 1022 aa17.66■□□□□ 0.42
CLTCL1-201ENST00000412649 NAIPQ13075 1403 aa17.66■□□□□ 0.42
CLTCL1-201ENST00000412649 DDX11L8A8MPP1 907 aa17.66■□□□□ 0.42
CLTCL1-201ENST00000412649 FBLN2P98095 1184 aa17.65■□□□□ 0.42
CLTCL1-201ENST00000412649 NCOA2Q15596 1464 aa17.65■□□□□ 0.42
CLTCL1-201ENST00000412649 RWDD1Q9H446 243 aaPredicted RBP17.64■□□□□ 0.41
CLTCL1-201ENST00000412649 MFAP1P55081 439 aaKnown RBP17.62■□□□□ 0.41
CLTCL1-201ENST00000412649 RRP9O43818 475 aaKnown RBP17.61■□□□□ 0.41
CLTCL1-201ENST00000412649 NUP155O75694 1391 aa17.61■□□□□ 0.41
CLTCL1-201ENST00000412649 MRE11P49959 708 aa17.6■□□□□ 0.41
CLTCL1-201ENST00000412649 SKAP1Q86WV1 359 aa17.6■□□□□ 0.41
CLTCL1-201ENST00000412649 CGNL1Q0VF96 1302 aa17.6■□□□□ 0.41
CLTCL1-201ENST00000412649 CHMP5Q9NZZ3 219 aa17.59■□□□□ 0.41
CLTCL1-201ENST00000412649 POGKQ9P215 609 aa17.59■□□□□ 0.41
CLTCL1-201ENST00000412649 ARID3AQ99856 593 aa17.59■□□□□ 0.41
CLTCL1-201ENST00000412649 CENPJQ9HC77 1338 aaPredicted RBP17.58■□□□□ 0.41
CLTCL1-201ENST00000412649 PANK3Q9H999 370 aa17.58■□□□□ 0.4
CLTCL1-201ENST00000412649 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
CLTCL1-201ENST00000412649 ANKRD30AQ9BXX3 1397 aa17.56■□□□□ 0.4
CLTCL1-201ENST00000412649 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
CLTCL1-201ENST00000412649 PLEKHD1A6NEE1 506 aa17.56■□□□□ 0.4
CLTCL1-201ENST00000412649 PCF11O94913 1555 aaKnown RBP17.55■□□□□ 0.4
CLTCL1-201ENST00000412649 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
CLTCL1-201ENST00000412649 MIA2Q96PC5 1412 aa17.54■□□□□ 0.4
CLTCL1-201ENST00000412649 CFTRP13569 1480 aa17.53■□□□□ 0.4
CLTCL1-201ENST00000412649 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
CLTCL1-201ENST00000412649 SKOR2Q2VWA4 1001 aaPredicted RBP17.53■□□□□ 0.4
CLTCL1-201ENST00000412649 TRAK2O60296 914 aa17.52■□□□□ 0.4
CLTCL1-201ENST00000412649 PTPN23Q9H3S7 1636 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 667.5 ms