RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 CASKIN1Q8WXD9 1431 aa7.69□□□□□ -1.18
R3HDM1-202ENST00000409478 RRP9O43818 475 aaKnown RBP7.68□□□□□ -1.18
R3HDM1-202ENST00000409478 VSIG10Q8N0Z9 540 aa7.68□□□□□ -1.18
R3HDM1-202ENST00000409478 PTPRKQ15262 1439 aa7.67□□□□□ -1.18
R3HDM1-202ENST00000409478 L1TD1Q5T7N2 865 aaKnown RBP7.67□□□□□ -1.18
R3HDM1-202ENST00000409478 SPATA31E1Q6ZUB1 1445 aa7.67□□□□□ -1.18
R3HDM1-202ENST00000409478 RCAN3Q9UKA8 241 aa7.67□□□□□ -1.18
R3HDM1-202ENST00000409478 DHX29Q7Z478 1369 aaKnown RBP7.67□□□□□ -1.18
R3HDM1-202ENST00000409478 EFCAB5A4FU69 1503 aa7.67□□□□□ -1.18
R3HDM1-202ENST00000409478 MIA2Q96PC5 1412 aa7.66□□□□□ -1.18
R3HDM1-202ENST00000409478 DCAF11Q8TEB1 546 aa7.66□□□□□ -1.18
R3HDM1-202ENST00000409478 IGF1RP08069 1367 aa7.66□□□□□ -1.18
R3HDM1-202ENST00000409478 FGD5Q6ZNL6 1462 aa7.66□□□□□ -1.18
R3HDM1-202ENST00000409478 HSP90AA2PQ14568 343 aaPredicted RBP7.66□□□□□ -1.18
R3HDM1-202ENST00000409478 PNISRQ8TF01 805 aaKnown RBP7.66□□□□□ -1.18
R3HDM1-202ENST00000409478 ARID4BQ4LE39 1312 aaPredicted RBP7.66□□□□□ -1.18
R3HDM1-202ENST00000409478 PDE3BQ13370 1112 aa7.66□□□□□ -1.18
R3HDM1-202ENST00000409478 GCC2Q8IWJ2 1684 aa7.65□□□□□ -1.18
R3HDM1-202ENST00000409478 HMGXB3Q12766 1538 aa7.65□□□□□ -1.18
R3HDM1-202ENST00000409478 L3MBTL2Q969R5 705 aa7.65□□□□□ -1.18
R3HDM1-202ENST00000409478 HSP90AA1P07900 732 aaKnown RBP7.65□□□□□ -1.19
R3HDM1-202ENST00000409478 LRPPRCP42704 1394 aaKnown RBP7.65□□□□□ -1.19
R3HDM1-202ENST00000409478 CARMIL1Q5VZK9 1371 aa7.65□□□□□ -1.19
R3HDM1-202ENST00000409478 FRAT2O75474 233 aaPredicted RBP7.64□□□□□ -1.19
R3HDM1-202ENST00000409478 TMC1Q8TDI8 760 aa7.64□□□□□ -1.19
R3HDM1-202ENST00000409478 ATP1B4Q9UN42 357 aaPredicted RBP7.64□□□□□ -1.19
R3HDM1-202ENST00000409478 KTN1Q86UP2 1357 aaKnown RBP7.64□□□□□ -1.19
R3HDM1-202ENST00000409478 MYOM3Q5VTT5 1437 aa7.64□□□□□ -1.19
R3HDM1-202ENST00000409478 ROCK2O75116 1388 aaKnown RBP7.64□□□□□ -1.19
R3HDM1-202ENST00000409478 RRAGDQ9NQL2 400 aaPredicted RBP7.63□□□□□ -1.19
R3HDM1-202ENST00000409478 DENND4BO75064 1496 aaPredicted RBP7.63□□□□□ -1.19
R3HDM1-202ENST00000409478 BRD4O60885 1362 aaPredicted RBP7.63□□□□□ -1.19
R3HDM1-202ENST00000409478 MTUS2Q5JR59 1369 aa7.63□□□□□ -1.19
R3HDM1-202ENST00000409478 FAM161AQ3B820 660 aa7.63□□□□□ -1.19
R3HDM1-202ENST00000409478 RPRD2Q5VT52 1461 aaKnown RBP7.62□□□□□ -1.19
R3HDM1-202ENST00000409478 PNNQ9H307 717 aaKnown RBP7.62□□□□□ -1.19
R3HDM1-202ENST00000409478 SLC4A3P48751 1232 aa7.62□□□□□ -1.19
R3HDM1-202ENST00000409478 NAP1L5Q96NT1 182 aaPredicted RBP7.62□□□□□ -1.19
R3HDM1-202ENST00000409478 TEX14Q8IWB6 1497 aa7.62□□□□□ -1.19
R3HDM1-202ENST00000409478 CLCN1P35523 988 aa7.61□□□□□ -1.19
R3HDM1-202ENST00000409478 FHOD3Q2V2M9 1422 aa7.61□□□□□ -1.19
R3HDM1-202ENST00000409478 PODXL2Q9NZ53 605 aa7.61□□□□□ -1.19
R3HDM1-202ENST00000409478 MPHOSPH9Q99550 1183 aa7.61□□□□□ -1.19
R3HDM1-202ENST00000409478 KIF15Q9NS87 1388 aa7.61□□□□□ -1.19
R3HDM1-202ENST00000409478 CENPQQ7L2Z9 268 aaPredicted RBP7.6□□□□□ -1.19
R3HDM1-202ENST00000409478 SUPT6HQ7KZ85 1726 aaKnown RBP7.6□□□□□ -1.19
R3HDM1-202ENST00000409478 CADPSQ9ULU8 1353 aa7.6□□□□□ -1.19
R3HDM1-202ENST00000409478 MYBBP1AQ9BQG0 1328 aaKnown RBP7.6□□□□□ -1.19
R3HDM1-202ENST00000409478 NBPF8Q3BBV2 869 aa7.6□□□□□ -1.19
R3HDM1-202ENST00000409478 RALBP1Q15311 655 aa7.59□□□□□ -1.19
R3HDM1-202ENST00000409478 TCOF1Q13428 1488 aaKnown RBP7.59□□□□□ -1.19
R3HDM1-202ENST00000409478 EHBP1L1Q8N3D4 1523 aa7.59□□□□□ -1.19
R3HDM1-202ENST00000409478 KDM2BQ8NHM5 1336 aa7.59□□□□□ -1.2
R3HDM1-202ENST00000409478 C8orf34Q49A92 452 aa7.58□□□□□ -1.2
R3HDM1-202ENST00000409478 THOC2Q8NI27 1593 aaKnown RBP7.58□□□□□ -1.2
R3HDM1-202ENST00000409478 ANKRD30BQ9BXX2 1392 aa7.58□□□□□ -1.2
R3HDM1-202ENST00000409478 SNAPC4Q5SXM2 1469 aa7.58□□□□□ -1.2
R3HDM1-202ENST00000409478 P3H3Q8IVL6 736 aa7.58□□□□□ -1.2
R3HDM1-202ENST00000409478 INSRP06213 1382 aa7.58□□□□□ -1.2
R3HDM1-202ENST00000409478 BECN1Q14457 450 aa7.57□□□□□ -1.2
R3HDM1-202ENST00000409478 CRBNQ96SW2 442 aa7.57□□□□□ -1.2
R3HDM1-202ENST00000409478 DNAJC5BQ9UF47 199 aa7.57□□□□□ -1.2
R3HDM1-202ENST00000409478 RRP7BPQ9NSQ0 103 aa7.57□□□□□ -1.2
R3HDM1-202ENST00000409478 POGKQ9P215 609 aa7.57□□□□□ -1.2
R3HDM1-202ENST00000409478 CFTRP13569 1480 aa7.57□□□□□ -1.2
R3HDM1-202ENST00000409478 ZMYM4Q5VZL5 1548 aa7.57□□□□□ -1.2
R3HDM1-202ENST00000409478 USP47Q96K76 1375 aa7.57□□□□□ -1.2
R3HDM1-202ENST00000409478 CENPJQ9HC77 1338 aaPredicted RBP7.57□□□□□ -1.2
R3HDM1-202ENST00000409478 GOLGA6L3A6NEY3 463 aa7.56□□□□□ -1.2
R3HDM1-202ENST00000409478 UGGT2Q9NYU1 1516 aa7.56□□□□□ -1.2
R3HDM1-202ENST00000409478 PDS5BQ9NTI5 1447 aa7.56□□□□□ -1.2
R3HDM1-202ENST00000409478 PLEKHH2Q8IVE3 1493 aa7.56□□□□□ -1.2
R3HDM1-202ENST00000409478 ARHGEF11O15085 1522 aa7.56□□□□□ -1.2
R3HDM1-202ENST00000409478 ERCC6Q03468 1493 aa7.56□□□□□ -1.2
R3HDM1-202ENST00000409478 FBLN2P98095 1184 aa7.55□□□□□ -1.2
R3HDM1-202ENST00000409478 BCORL1Q5H9F3 1711 aa7.55□□□□□ -1.2
R3HDM1-202ENST00000409478 TPM2P07951 284 aa7.55□□□□□ -1.2
R3HDM1-202ENST00000409478 KDM5CP41229 1560 aa7.55□□□□□ -1.2
R3HDM1-202ENST00000409478 KIF14Q15058 1648 aa7.55□□□□□ -1.2
R3HDM1-202ENST00000409478 CNGB1Q14028 1251 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-202ENST00000409478 MBD5Q9P267 1494 aa7.54□□□□□ -1.2
R3HDM1-202ENST00000409478 POLR3GLQ9BT43 218 aa7.54□□□□□ -1.2
R3HDM1-202ENST00000409478 KDM6BO15054 1643 aa7.54□□□□□ -1.2
R3HDM1-202ENST00000409478 PDCL3Q9H2J4 239 aa7.54□□□□□ -1.2
R3HDM1-202ENST00000409478 SENP3-EIF4A1A0A087X0R7 540 aa7.54□□□□□ -1.2
R3HDM1-202ENST00000409478 FSD2A1L4K1 749 aa7.54□□□□□ -1.2
R3HDM1-202ENST00000409478 NLRP13Q86W25 1043 aa7.54□□□□□ -1.2
R3HDM1-202ENST00000409478 CTTNBP2Q8WZ74 1663 aa7.53□□□□□ -1.2
R3HDM1-202ENST00000409478 PRDM2Q13029 1718 aa7.53□□□□□ -1.2
R3HDM1-202ENST00000409478 PLIN1O60240 522 aa7.53□□□□□ -1.2
R3HDM1-202ENST00000409478 XRCC6P12956 609 aaKnown RBP eCLIP7.53□□□□□ -1.2
R3HDM1-202ENST00000409478 SKAP1Q86WV1 359 aa7.53□□□□□ -1.2
R3HDM1-202ENST00000409478 GRIN2BQ13224 1484 aa7.53□□□□□ -1.2
R3HDM1-202ENST00000409478 CHIC2Q9UKJ5 165 aa7.52□□□□□ -1.2
R3HDM1-202ENST00000409478 ISY1Q9ULR0 285 aaKnown RBP7.52□□□□□ -1.2
R3HDM1-202ENST00000409478 CALD1Q05682 793 aaKnown RBP7.52□□□□□ -1.21
R3HDM1-202ENST00000409478 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-202ENST00000409478 ROCK1Q13464 1354 aa7.52□□□□□ -1.21
R3HDM1-202ENST00000409478 MRE11P49959 708 aa7.52□□□□□ -1.21
R3HDM1-202ENST00000409478 BLMP54132 1417 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms