RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 FHOD3Q2V2M9 1422 aa14.82□□□□□ -0.04
GPN1-202ENST00000407583 ZMYM4Q5VZL5 1548 aa14.8□□□□□ -0.04
GPN1-202ENST00000407583 EFCAB5A4FU69 1503 aa14.79□□□□□ -0.04
GPN1-202ENST00000407583 PIP4K2BP78356 416 aa14.79□□□□□ -0.04
GPN1-202ENST00000407583 ATP10BO94823 1461 aa14.76□□□□□ -0.05
GPN1-202ENST00000407583 RGS17Q9UGC6 210 aaPredicted RBP14.75□□□□□ -0.05
GPN1-202ENST00000407583 SRCAPQ6ZRS2 3230 aa14.74□□□□□ -0.05
GPN1-202ENST00000407583 MAGI2Q86UL8 1455 aa14.72□□□□□ -0.05
GPN1-202ENST00000407583 HECW1Q76N89 1606 aa14.71□□□□□ -0.05
GPN1-202ENST00000407583 SETD1BQ9UPS6 1966 aaKnown RBP14.71□□□□□ -0.05
GPN1-202ENST00000407583 MSH5O43196 834 aa14.7□□□□□ -0.06
GPN1-202ENST00000407583 CAMSAP1Q5T5Y3 1602 aa14.7□□□□□ -0.06
GPN1-202ENST00000407583 NCKAP5LQ9HCH0 1330 aa14.69□□□□□ -0.06
GPN1-202ENST00000407583 C9orf84Q5VXU9 1444 aa14.68□□□□□ -0.06
GPN1-202ENST00000407583 ATP10AO60312 1499 aa14.67□□□□□ -0.06
GPN1-202ENST00000407583 GOLGA3Q08378 1498 aa14.67□□□□□ -0.06
GPN1-202ENST00000407583 C3P01024 1663 aa14.67□□□□□ -0.06
GPN1-202ENST00000407583 TOM1O60784 492 aa14.66□□□□□ -0.06
GPN1-202ENST00000407583 TRAPPC8Q9Y2L5 1435 aa14.65□□□□□ -0.06
GPN1-202ENST00000407583 CFAP74Q9C0B2 1584 aa14.64□□□□□ -0.07
GPN1-202ENST00000407583 RAPGEF2Q9Y4G8 1499 aa14.64□□□□□ -0.07
GPN1-202ENST00000407583 POTEAQ6S8J7 498 aa14.61□□□□□ -0.07
GPN1-202ENST00000407583 SUPT5HO00267 1087 aaKnown RBP14.6□□□□□ -0.07
GPN1-202ENST00000407583 ALKQ9UM73 1620 aa14.6□□□□□ -0.07
GPN1-202ENST00000407583 SETD1AO15047 1707 aaKnown RBP14.6□□□□□ -0.07
GPN1-202ENST00000407583 SCAPERQ9BY12 1400 aa14.57□□□□□ -0.08
GPN1-202ENST00000407583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
GPN1-202ENST00000407583 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
GPN1-202ENST00000407583 PPP6R1Q9UPN7 881 aa14.56□□□□□ -0.08
GPN1-202ENST00000407583 TCOF1Q13428 1488 aaKnown RBP14.56□□□□□ -0.08
GPN1-202ENST00000407583 CTTNBP2Q8WZ74 1663 aa14.55□□□□□ -0.08
GPN1-202ENST00000407583 PKD2Q13563 968 aa14.55□□□□□ -0.08
GPN1-202ENST00000407583 PLA2R1Q13018 1463 aa14.55□□□□□ -0.08
GPN1-202ENST00000407583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.54□□□□□ -0.08
GPN1-202ENST00000407583 CPS1P31327 1500 aa14.54□□□□□ -0.08
GPN1-202ENST00000407583 PTPRKQ15262 1439 aa14.52□□□□□ -0.09
GPN1-202ENST00000407583 P3H3Q8IVL6 736 aa14.51□□□□□ -0.09
GPN1-202ENST00000407583 ESF1Q9H501 851 aaKnown RBP14.5□□□□□ -0.09
GPN1-202ENST00000407583 RAPGEF6Q8TEU7 1601 aa14.49□□□□□ -0.09
GPN1-202ENST00000407583 NPATQ14207 1427 aa14.49□□□□□ -0.09
GPN1-202ENST00000407583 UPF1Q92900 1129 aaKnown RBP eCLIP14.48□□□□□ -0.09
GPN1-202ENST00000407583 NUP153P49790 1475 aaKnown RBP14.48□□□□□ -0.09
GPN1-202ENST00000407583 SHANK2Q9UPX8 1470 aa14.48□□□□□ -0.09
GPN1-202ENST00000407583 DIP2CQ9Y2E4 1556 aa14.47□□□□□ -0.09
GPN1-202ENST00000407583 FAM9AQ8IZU1 332 aaPredicted RBP14.47□□□□□ -0.09
GPN1-202ENST00000407583 AGLP35573 1532 aa14.46□□□□□ -0.09
GPN1-202ENST00000407583 ZNF142P52746 1687 aaPredicted RBP14.46□□□□□ -0.1
GPN1-202ENST00000407583 REREQ9P2R6 1566 aa14.45□□□□□ -0.1
GPN1-202ENST00000407583 MYO3AQ8NEV4 1616 aa14.45□□□□□ -0.1
GPN1-202ENST00000407583 CNTLNQ9NXG0 1405 aa14.44□□□□□ -0.1
GPN1-202ENST00000407583 CEP170BQ9Y4F5 1589 aaPredicted RBP14.44□□□□□ -0.1
GPN1-202ENST00000407583 PLEKHD1A6NEE1 506 aa14.43□□□□□ -0.1
GPN1-202ENST00000407583 SUPT6HQ7KZ85 1726 aaKnown RBP14.41□□□□□ -0.1
GPN1-202ENST00000407583 ABCA6Q8N139 1617 aa14.41□□□□□ -0.1
GPN1-202ENST00000407583 KDM5CP41229 1560 aa14.41□□□□□ -0.1
GPN1-202ENST00000407583 ZNF518AQ6AHZ1 1483 aa14.41□□□□□ -0.1
GPN1-202ENST00000407583 PLCH2O75038 1416 aa14.41□□□□□ -0.1
GPN1-202ENST00000407583 AFAP1Q8N556 730 aa14.4□□□□□ -0.1
GPN1-202ENST00000407583 MYT1LQ9UL68 1186 aa14.39□□□□□ -0.11
GPN1-202ENST00000407583 VWDEQ8N2E2 1590 aa14.39□□□□□ -0.11
GPN1-202ENST00000407583 NEURL4Q96JN8 1562 aa14.39□□□□□ -0.11
GPN1-202ENST00000407583 ZMYM3Q14202 1370 aa14.39□□□□□ -0.11
GPN1-202ENST00000407583 MROH2AA6NES4 1674 aa14.37□□□□□ -0.11
GPN1-202ENST00000407583 RNF17Q9BXT8 1623 aaKnown RBP14.35□□□□□ -0.11
GPN1-202ENST00000407583 SAMD9Q5K651 1589 aa14.33□□□□□ -0.12
GPN1-202ENST00000407583 EFCAB2Q5VUJ9 269 aa14.33□□□□□ -0.12
GPN1-202ENST00000407583 LRRC7Q96NW7 1537 aa14.32□□□□□ -0.12
GPN1-202ENST00000407583 POLR1AO95602 1720 aaPredicted RBP14.32□□□□□ -0.12
GPN1-202ENST00000407583 DNMT1P26358 1616 aaKnown RBP14.31□□□□□ -0.12
GPN1-202ENST00000407583 MLH3Q9UHC1 1453 aa14.31□□□□□ -0.12
GPN1-202ENST00000407583 A2ML1A8K2U0 1454 aa14.29□□□□□ -0.12
GPN1-202ENST00000407583 TRIM52Q96A61 297 aa14.29□□□□□ -0.12
GPN1-202ENST00000407583 STRCP1A6NGW2 1772 aa14.27□□□□□ -0.13
GPN1-202ENST00000407583 CLTCQ00610 1675 aaKnown RBP14.26□□□□□ -0.13
GPN1-202ENST00000407583 MYO5CQ9NQX4 1742 aa14.26□□□□□ -0.13
GPN1-202ENST00000407583 HRCP23327 699 aa14.25□□□□□ -0.13
GPN1-202ENST00000407583 SYNMO15061 1565 aa14.25□□□□□ -0.13
GPN1-202ENST00000407583 CDK13Q14004 1512 aaKnown RBP14.24□□□□□ -0.13
GPN1-202ENST00000407583 PRXQ9BXM0 1461 aa14.24□□□□□ -0.13
GPN1-202ENST00000407583 ARHGAP5Q13017 1502 aa14.23□□□□□ -0.13
GPN1-202ENST00000407583 NPHP4O75161 1426 aaPredicted RBP14.22□□□□□ -0.13
GPN1-202ENST00000407583 KIDINS220Q9ULH0 1771 aa14.21□□□□□ -0.14
GPN1-202ENST00000407583 FAM135BQ49AJ0 1406 aa14.2□□□□□ -0.14
GPN1-202ENST00000407583 ANKLE2Q86XL3 938 aa14.2□□□□□ -0.14
GPN1-202ENST00000407583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.2□□□□□ -0.14
GPN1-202ENST00000407583 MED14O60244 1454 aa14.2□□□□□ -0.14
GPN1-202ENST00000407583 KIF14Q15058 1648 aa14.17□□□□□ -0.14
GPN1-202ENST00000407583 SETBP1Q9Y6X0 1596 aa14.17□□□□□ -0.14
GPN1-202ENST00000407583 ABCC1P33527 1531 aa14.16□□□□□ -0.14
GPN1-202ENST00000407583 IQGAP1P46940 1657 aa14.16□□□□□ -0.14
GPN1-202ENST00000407583 DEPDC5O75140 1603 aa14.15□□□□□ -0.14
GPN1-202ENST00000407583 ITSN2Q9NZM3 1697 aa14.14□□□□□ -0.15
GPN1-202ENST00000407583 RANGAP1P46060 587 aaPredicted RBP14.13□□□□□ -0.15
GPN1-202ENST00000407583 ROBO1Q9Y6N7 1651 aa14.13□□□□□ -0.15
GPN1-202ENST00000407583 LRP6O75581 1613 aa14.13□□□□□ -0.15
GPN1-202ENST00000407583 ZNF772Q68DY9 489 aaPredicted RBP14.12□□□□□ -0.15
GPN1-202ENST00000407583 TNRQ92752 1358 aa14.12□□□□□ -0.15
GPN1-202ENST00000407583 RXRBP28702 533 aa14.11□□□□□ -0.15
GPN1-202ENST00000407583 GGT6Q6P531 493 aa14.11□□□□□ -0.15
GPN1-202ENST00000407583 XIRP1Q702N8 1843 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms