RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 NISCHQ9Y2I1 1504 aa21.73■■□□□ 1.07
GPN1-202ENST00000407583 ABCC9O60706 1549 aa21.09■□□□□ 0.97
GPN1-202ENST00000407583 DNAJC5BQ9UF47 199 aa20.81■□□□□ 0.92
GPN1-202ENST00000407583 CCDC180Q9P1Z9 1646 aa19.93■□□□□ 0.78
GPN1-202ENST00000407583 DNAJC5Q9H3Z4 198 aa19.84■□□□□ 0.77
GPN1-202ENST00000407583 RB1CC1Q8TDY2 1594 aa19.52■□□□□ 0.71
GPN1-202ENST00000407583 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
GPN1-202ENST00000407583 NACADO15069 1562 aa19.11■□□□□ 0.65
GPN1-202ENST00000407583 CECR2Q9BXF3 1484 aa19.1■□□□□ 0.65
GPN1-202ENST00000407583 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
GPN1-202ENST00000407583 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
GPN1-202ENST00000407583 CC2D2AQ9P2K1 1620 aa18.97■□□□□ 0.63
GPN1-202ENST00000407583 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
GPN1-202ENST00000407583 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
GPN1-202ENST00000407583 EIF4G1Q04637 1599 aaKnown RBP18.66■□□□□ 0.58
GPN1-202ENST00000407583 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
GPN1-202ENST00000407583 CUX2O14529 1486 aa18.59■□□□□ 0.57
GPN1-202ENST00000407583 TRIM41Q8WV44 630 aa18.55■□□□□ 0.56
GPN1-202ENST00000407583 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
GPN1-202ENST00000407583 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
GPN1-202ENST00000407583 SCRIBQ14160 1630 aa18.17■□□□□ 0.5
GPN1-202ENST00000407583 THOC2Q8NI27 1593 aaKnown RBP17.84■□□□□ 0.45
GPN1-202ENST00000407583 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
GPN1-202ENST00000407583 NESP48681 1621 aa17.83■□□□□ 0.44
GPN1-202ENST00000407583 ZCCHC6Q5VYS8 1495 aaKnown RBP17.79■□□□□ 0.44
GPN1-202ENST00000407583 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
GPN1-202ENST00000407583 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
GPN1-202ENST00000407583 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
GPN1-202ENST00000407583 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
GPN1-202ENST00000407583 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
GPN1-202ENST00000407583 KIF21AQ7Z4S6 1674 aa17.5■□□□□ 0.39
GPN1-202ENST00000407583 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
GPN1-202ENST00000407583 RIMBP3CA6NJZ7 1639 aa17.48■□□□□ 0.39
GPN1-202ENST00000407583 RIMBP3BA6NNM3 1639 aa17.48■□□□□ 0.39
GPN1-202ENST00000407583 RIMBP3Q9UFD9 1639 aa17.48■□□□□ 0.39
GPN1-202ENST00000407583 HMGXB3Q12766 1538 aa17.45■□□□□ 0.38
GPN1-202ENST00000407583 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
GPN1-202ENST00000407583 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
GPN1-202ENST00000407583 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
GPN1-202ENST00000407583 MRC2Q9UBG0 1479 aa17.34■□□□□ 0.37
GPN1-202ENST00000407583 WDR62O43379 1518 aa17.33■□□□□ 0.37
GPN1-202ENST00000407583 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
GPN1-202ENST00000407583 BAZ1BQ9UIG0 1483 aaKnown RBP17.26■□□□□ 0.35
GPN1-202ENST00000407583 CYB5RLQ6IPT4 315 aa17.24■□□□□ 0.35
GPN1-202ENST00000407583 ILDR1Q86SU0 546 aaPredicted RBP17.2■□□□□ 0.34
GPN1-202ENST00000407583 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
GPN1-202ENST00000407583 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
GPN1-202ENST00000407583 ARAP1Q96P48 1450 aa17.1■□□□□ 0.33
GPN1-202ENST00000407583 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
GPN1-202ENST00000407583 PEG3Q9GZU2 1588 aa17.01■□□□□ 0.31
GPN1-202ENST00000407583 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
GPN1-202ENST00000407583 URB2Q14146 1524 aaKnown RBP16.89■□□□□ 0.29
GPN1-202ENST00000407583 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
GPN1-202ENST00000407583 RSF1Q96T23 1441 aaPredicted RBP16.82■□□□□ 0.28
GPN1-202ENST00000407583 MROH2BQ7Z745 1585 aa16.76■□□□□ 0.27
GPN1-202ENST00000407583 CHD1O14646 1710 aa16.74■□□□□ 0.27
GPN1-202ENST00000407583 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
GPN1-202ENST00000407583 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
GPN1-202ENST00000407583 CFTRP13569 1480 aa16.68■□□□□ 0.26
GPN1-202ENST00000407583 FBLN2P98095 1184 aa16.64■□□□□ 0.26
GPN1-202ENST00000407583 KDM4FA0A1W2PPD8 638 aa16.58■□□□□ 0.24
GPN1-202ENST00000407583 AQRO60306 1485 aaKnown RBP eCLIP16.56■□□□□ 0.24
GPN1-202ENST00000407583 CLASP1Q7Z460 1538 aa16.56■□□□□ 0.24
GPN1-202ENST00000407583 WIZO95785 1651 aa16.49■□□□□ 0.23
GPN1-202ENST00000407583 TOPBP1Q92547 1522 aa16.48■□□□□ 0.23
GPN1-202ENST00000407583 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
GPN1-202ENST00000407583 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
GPN1-202ENST00000407583 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
GPN1-202ENST00000407583 SNAPC4Q5SXM2 1469 aa16.36■□□□□ 0.21
GPN1-202ENST00000407583 KIF13AQ9H1H9 1805 aa16.35■□□□□ 0.21
GPN1-202ENST00000407583 ERCC6L2Q5T890 1561 aa16.34■□□□□ 0.21
GPN1-202ENST00000407583 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
GPN1-202ENST00000407583 FBXO41Q8TF61 875 aa16.32■□□□□ 0.2
GPN1-202ENST00000407583 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
GPN1-202ENST00000407583 HECW2Q9P2P5 1572 aa16.31■□□□□ 0.2
GPN1-202ENST00000407583 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
GPN1-202ENST00000407583 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
GPN1-202ENST00000407583 ABCC8Q09428 1581 aa16.29■□□□□ 0.2
GPN1-202ENST00000407583 TDRD9Q8NDG6 1382 aaKnown RBP16.28■□□□□ 0.2
GPN1-202ENST00000407583 LMTK3Q96Q04 1460 aa16.27■□□□□ 0.2
GPN1-202ENST00000407583 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
GPN1-202ENST00000407583 RAD54L2Q9Y4B4 1467 aa16.24■□□□□ 0.19
GPN1-202ENST00000407583 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
GPN1-202ENST00000407583 KDM6BO15054 1643 aa16.21■□□□□ 0.19
GPN1-202ENST00000407583 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
GPN1-202ENST00000407583 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
GPN1-202ENST00000407583 ADGRL1O94910 1474 aa16.18■□□□□ 0.18
GPN1-202ENST00000407583 FAM69CQ0P6D2 419 aa16.17■□□□□ 0.18
GPN1-202ENST00000407583 SOCS7O14512 581 aa16.14■□□□□ 0.17
GPN1-202ENST00000407583 ABCC10Q5T3U5 1492 aa16.14■□□□□ 0.17
GPN1-202ENST00000407583 SOGA1O94964 1423 aa16.13■□□□□ 0.17
GPN1-202ENST00000407583 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
GPN1-202ENST00000407583 WDR97A6NE52 1622 aa16.11■□□□□ 0.17
GPN1-202ENST00000407583 ILDR2Q71H61 639 aa16.11■□□□□ 0.17
GPN1-202ENST00000407583 DIP2BQ9P265 1576 aa16.08■□□□□ 0.16
GPN1-202ENST00000407583 CEP170Q5SW79 1584 aa16.07■□□□□ 0.16
GPN1-202ENST00000407583 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
GPN1-202ENST00000407583 MAPKBP1O60336 1514 aa15.99■□□□□ 0.15
GPN1-202ENST00000407583 FGD5Q6ZNL6 1462 aa15.99■□□□□ 0.15
GPN1-202ENST00000407583 PBRM1Q86U86 1689 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms