RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 UHRF1BP1LA0JNW5 1464 aa9.31□□□□□ -0.92
TM9SF4-202ENST00000398022 KIAA0586Q9BVV6 1533 aa9.3□□□□□ -0.92
TM9SF4-202ENST00000398022 KDM6BO15054 1643 aa9.3□□□□□ -0.92
TM9SF4-202ENST00000398022 RBM10P98175 930 aaKnown RBP9.3□□□□□ -0.92
TM9SF4-202ENST00000398022 CCDC9Q9Y3X0 531 aaKnown RBP9.3□□□□□ -0.92
TM9SF4-202ENST00000398022 CHMP7Q8WUX9 453 aaPredicted RBP9.29□□□□□ -0.92
TM9SF4-202ENST00000398022 IGF1RP08069 1367 aa9.27□□□□□ -0.92
TM9SF4-202ENST00000398022 UGGT2Q9NYU1 1516 aa9.27□□□□□ -0.92
TM9SF4-202ENST00000398022 MYT1LQ9UL68 1186 aa9.27□□□□□ -0.92
TM9SF4-202ENST00000398022 COL17A1Q9UMD9 1497 aaPredicted RBP9.27□□□□□ -0.93
TM9SF4-202ENST00000398022 KIAA0556O60303 1618 aa9.27□□□□□ -0.93
TM9SF4-202ENST00000398022 KDM2AQ9Y2K7 1162 aa9.27□□□□□ -0.93
TM9SF4-202ENST00000398022 SIGLEC1Q9BZZ2 1709 aa9.27□□□□□ -0.93
TM9SF4-202ENST00000398022 KDM5BQ9UGL1 1544 aa9.26□□□□□ -0.93
TM9SF4-202ENST00000398022 NEUROD1Q13562 356 aa9.26□□□□□ -0.93
TM9SF4-202ENST00000398022 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.26□□□□□ -0.93
TM9SF4-202ENST00000398022 PUS7Q96PZ0 661 aaKnown RBP9.26□□□□□ -0.93
TM9SF4-202ENST00000398022 IQGAP2Q13576 1575 aa9.26□□□□□ -0.93
TM9SF4-202ENST00000398022 FBLN2P98095 1184 aa9.25□□□□□ -0.93
TM9SF4-202ENST00000398022 PHF23Q9BUL5 403 aaPredicted RBP9.25□□□□□ -0.93
TM9SF4-202ENST00000398022 CFAP44Q96MT7 982 aa9.25□□□□□ -0.93
TM9SF4-202ENST00000398022 GOLGA3Q08378 1498 aa9.25□□□□□ -0.93
TM9SF4-202ENST00000398022 ZNF316A6NFI3 1004 aaPredicted RBP9.24□□□□□ -0.93
TM9SF4-202ENST00000398022 ABCA8O94911 1581 aa9.23□□□□□ -0.93
TM9SF4-202ENST00000398022 KDM4FA0A1W2PPD8 638 aa9.23□□□□□ -0.93
TM9SF4-202ENST00000398022 CFAP43Q8NDM7 1665 aa9.23□□□□□ -0.93
TM9SF4-202ENST00000398022 IRX6P78412 446 aaPredicted RBP9.22□□□□□ -0.93
TM9SF4-202ENST00000398022 FRMPD1Q5SYB0 1578 aa9.22□□□□□ -0.93
TM9SF4-202ENST00000398022 DEKP35659 375 aaKnown RBP9.21□□□□□ -0.93
TM9SF4-202ENST00000398022 EPRSP07814 1512 aaKnown RBP9.21□□□□□ -0.94
TM9SF4-202ENST00000398022 TRHP20396 242 aaPredicted RBP9.21□□□□□ -0.94
TM9SF4-202ENST00000398022 ADAMTSL3P82987 1691 aa9.19□□□□□ -0.94
TM9SF4-202ENST00000398022 SAMD9Q5K651 1589 aa9.18□□□□□ -0.94
TM9SF4-202ENST00000398022 ZMYND15Q9H091 742 aa9.18□□□□□ -0.94
TM9SF4-202ENST00000398022 TICAM2Q86XR7 235 aa9.17□□□□□ -0.94
TM9SF4-202ENST00000398022 JPH4Q96JJ6 628 aa9.17□□□□□ -0.94
TM9SF4-202ENST00000398022 HECW2Q9P2P5 1572 aa9.17□□□□□ -0.94
TM9SF4-202ENST00000398022 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.16□□□□□ -0.94
TM9SF4-202ENST00000398022 HNRNPUL2Q1KMD3 747 aaKnown RBP9.15□□□□□ -0.94
TM9SF4-202ENST00000398022 ABCA9Q8IUA7 1624 aa9.15□□□□□ -0.94
TM9SF4-202ENST00000398022 ASXL2Q76L83 1435 aa9.15□□□□□ -0.94
TM9SF4-202ENST00000398022 CLIP1P30622 1438 aa9.15□□□□□ -0.95
TM9SF4-202ENST00000398022 KIF21BO75037 1637 aa9.15□□□□□ -0.95
TM9SF4-202ENST00000398022 ADGRL1O94910 1474 aa9.14□□□□□ -0.95
TM9SF4-202ENST00000398022 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
TM9SF4-202ENST00000398022 MAGI3Q5TCQ9 1506 aa9.13□□□□□ -0.95
TM9SF4-202ENST00000398022 LRRIQ1Q96JM4 1722 aa9.13□□□□□ -0.95
TM9SF4-202ENST00000398022 CLSTN1O94985 981 aa9.12□□□□□ -0.95
TM9SF4-202ENST00000398022 NCLP19338 710 aaKnown RBP9.12□□□□□ -0.95
TM9SF4-202ENST00000398022 YTHDC1Q96MU7 727 aaKnown RBP9.12□□□□□ -0.95
TM9SF4-202ENST00000398022 BRPF3Q9ULD4 1205 aa9.11□□□□□ -0.95
TM9SF4-202ENST00000398022 PLB1Q6P1J6 1458 aa9.11□□□□□ -0.95
TM9SF4-202ENST00000398022 KIF27Q86VH2 1401 aa9.11□□□□□ -0.95
TM9SF4-202ENST00000398022 VPS8Q8N3P4 1428 aa9.11□□□□□ -0.95
TM9SF4-202ENST00000398022 BCORL1Q5H9F3 1711 aa9.1□□□□□ -0.95
TM9SF4-202ENST00000398022 PRXQ9BXM0 1461 aa9.1□□□□□ -0.95
TM9SF4-202ENST00000398022 UACAQ9BZF9 1416 aa9.09□□□□□ -0.95
TM9SF4-202ENST00000398022 ZNF592Q92610 1267 aa9.09□□□□□ -0.95
TM9SF4-202ENST00000398022 NAP1L2Q9ULW6 460 aaPredicted RBP9.09□□□□□ -0.95
TM9SF4-202ENST00000398022 ARAP3Q8WWN8 1544 aa9.09□□□□□ -0.95
TM9SF4-202ENST00000398022 WDR7Q9Y4E6 1490 aa9.08□□□□□ -0.96
TM9SF4-202ENST00000398022 ZFP91Q96JP5 570 aaPredicted RBP9.07□□□□□ -0.96
TM9SF4-202ENST00000398022 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.07□□□□□ -0.96
TM9SF4-202ENST00000398022 CARMIL1Q5VZK9 1371 aa9.06□□□□□ -0.96
TM9SF4-202ENST00000398022 RAPGEF2Q9Y4G8 1499 aa9.06□□□□□ -0.96
TM9SF4-202ENST00000398022 MIER1Q8N108 512 aa9.05□□□□□ -0.96
TM9SF4-202ENST00000398022 TEX2Q8IWB9 1127 aa9.05□□□□□ -0.96
TM9SF4-202ENST00000398022 PSMD1Q99460 953 aa9.05□□□□□ -0.96
TM9SF4-202ENST00000398022 FAM69CQ0P6D2 419 aa9.04□□□□□ -0.96
TM9SF4-202ENST00000398022 ARID3AQ99856 593 aa9.04□□□□□ -0.96
TM9SF4-202ENST00000398022 PTPRGP23470 1445 aa9.04□□□□□ -0.96
TM9SF4-202ENST00000398022 ZBTB7CA1YPR0 619 aa9.03□□□□□ -0.96
TM9SF4-202ENST00000398022 CNPY4Q8N129 248 aa9.03□□□□□ -0.96
TM9SF4-202ENST00000398022 IPO4Q8TEX9 1081 aaKnown RBP9.03□□□□□ -0.96
TM9SF4-202ENST00000398022 ZMYM4Q5VZL5 1548 aa9.02□□□□□ -0.97
TM9SF4-202ENST00000398022 RAPGEF6Q8TEU7 1601 aa9.02□□□□□ -0.97
TM9SF4-202ENST00000398022 TEX14Q8IWB6 1497 aa9.01□□□□□ -0.97
TM9SF4-202ENST00000398022 PRDM10Q9NQV6 1147 aa9□□□□□ -0.97
TM9SF4-202ENST00000398022 ARHGEF40Q8TER5 1519 aa9□□□□□ -0.97
TM9SF4-202ENST00000398022 NPM1P06748 294 aaKnown RBP eCLIP9□□□□□ -0.97
TM9SF4-202ENST00000398022 CHRM1P11229 460 aaPredicted RBP9□□□□□ -0.97
TM9SF4-202ENST00000398022 MADDQ8WXG6 1647 aa9□□□□□ -0.97
TM9SF4-202ENST00000398022 TMED8Q6PL24 325 aaPredicted RBP9□□□□□ -0.97
TM9SF4-202ENST00000398022 STRCQ7RTU9 1775 aa8.99□□□□□ -0.97
TM9SF4-202ENST00000398022 TTC37Q6PGP7 1564 aa8.99□□□□□ -0.97
TM9SF4-202ENST00000398022 FKBP8Q14318 412 aa8.99□□□□□ -0.97
TM9SF4-202ENST00000398022 ATP10BO94823 1461 aa8.98□□□□□ -0.97
TM9SF4-202ENST00000398022 LMTK3Q96Q04 1460 aa8.97□□□□□ -0.97
TM9SF4-202ENST00000398022 CARMIL2Q6F5E8 1435 aa8.97□□□□□ -0.97
TM9SF4-202ENST00000398022 PLCD4Q9BRC7 762 aa8.97□□□□□ -0.97
TM9SF4-202ENST00000398022 NUP153P49790 1475 aaKnown RBP8.96□□□□□ -0.97
TM9SF4-202ENST00000398022 CERS3Q8IU89 383 aa8.96□□□□□ -0.98
TM9SF4-202ENST00000398022 SECISBP2LQ93073 1101 aaKnown RBP8.95□□□□□ -0.98
TM9SF4-202ENST00000398022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.95□□□□□ -0.98
TM9SF4-202ENST00000398022 ZBTB22O15209 634 aa8.94□□□□□ -0.98
TM9SF4-202ENST00000398022 DHX57Q6P158 1386 aaKnown RBP8.94□□□□□ -0.98
TM9SF4-202ENST00000398022 PTMSP20962 102 aa8.93□□□□□ -0.98
TM9SF4-202ENST00000398022 CHMP4BQ9H444 224 aaKnown RBP8.93□□□□□ -0.98
TM9SF4-202ENST00000398022 RIMS1Q86UR5 1692 aaKnown RBP8.93□□□□□ -0.98
TM9SF4-202ENST00000398022 NECTIN2Q92692 538 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms