RNA–Protein interactions for RNA: ENST00000379205.4

C4orf46-201, Transcript of chromosome 4 open reading frame 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4orf46, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-201ENST00000379205 UACAQ9BZF9 1416 aa13.03□□□□□ -0.32
C4orf46-201ENST00000379205 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
C4orf46-201ENST00000379205 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.32
C4orf46-201ENST00000379205 CRBNQ96SW2 442 aa13.02□□□□□ -0.32
C4orf46-201ENST00000379205 USP35Q9P2H5 1018 aa13.02□□□□□ -0.32
C4orf46-201ENST00000379205 NCAPD3P42695 1498 aa13.02□□□□□ -0.33
C4orf46-201ENST00000379205 SLKQ9H2G2 1235 aaPredicted RBP13.02□□□□□ -0.33
C4orf46-201ENST00000379205 FMN1Q68DA7 1419 aa13.01□□□□□ -0.33
C4orf46-201ENST00000379205 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
C4orf46-201ENST00000379205 PTPRKQ15262 1439 aa13.01□□□□□ -0.33
C4orf46-201ENST00000379205 FGD6Q6ZV73 1430 aa13□□□□□ -0.33
C4orf46-201ENST00000379205 TOP2BQ02880 1626 aa12.99□□□□□ -0.33
C4orf46-201ENST00000379205 NAP1L5Q96NT1 182 aaPredicted RBP12.99□□□□□ -0.33
C4orf46-201ENST00000379205 PNISRQ8TF01 805 aaKnown RBP12.99□□□□□ -0.33
C4orf46-201ENST00000379205 GZF1Q9H116 711 aaPredicted RBP12.98□□□□□ -0.33
C4orf46-201ENST00000379205 SMG6Q86US8 1419 aaKnown RBP12.98□□□□□ -0.33
C4orf46-201ENST00000379205 RGL3Q3MIN7 710 aa12.97□□□□□ -0.33
C4orf46-201ENST00000379205 UBE2Q2Q8WVN8 375 aa12.96□□□□□ -0.34
C4orf46-201ENST00000379205 CUX1P39880 1505 aa12.96□□□□□ -0.34
C4orf46-201ENST00000379205 NAIPQ13075 1403 aa12.95□□□□□ -0.34
C4orf46-201ENST00000379205 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
C4orf46-201ENST00000379205 C20orf194Q5TEA3 1177 aa12.94□□□□□ -0.34
C4orf46-201ENST00000379205 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
C4orf46-201ENST00000379205 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
C4orf46-201ENST00000379205 CANXP27824 592 aaKnown RBP12.92□□□□□ -0.34
C4orf46-201ENST00000379205 ZNF644Q9H582 1327 aaPredicted RBP12.92□□□□□ -0.34
C4orf46-201ENST00000379205 HFM1A2PYH4 1435 aa12.91□□□□□ -0.34
C4orf46-201ENST00000379205 DCAF11Q8TEB1 546 aa12.91□□□□□ -0.34
C4orf46-201ENST00000379205 PKD2Q13563 968 aa12.91□□□□□ -0.34
C4orf46-201ENST00000379205 USP47Q96K76 1375 aa12.9□□□□□ -0.34
C4orf46-201ENST00000379205 MS4A1P11836 297 aa12.89□□□□□ -0.35
C4orf46-201ENST00000379205 POGKQ9P215 609 aa12.89□□□□□ -0.35
C4orf46-201ENST00000379205 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
C4orf46-201ENST00000379205 WASHC2CQ9Y4E1 1318 aa12.88□□□□□ -0.35
C4orf46-201ENST00000379205 PCF11O94913 1555 aaKnown RBP12.88□□□□□ -0.35
C4orf46-201ENST00000379205 CFTRP13569 1480 aa12.88□□□□□ -0.35
C4orf46-201ENST00000379205 GLIPR1L2Q4G1C9 344 aa12.87□□□□□ -0.35
C4orf46-201ENST00000379205 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
C4orf46-201ENST00000379205 WDR43Q15061 677 aaKnown RBP eCLIP12.85□□□□□ -0.35
C4orf46-201ENST00000379205 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
C4orf46-201ENST00000379205 PKNOX2Q96KN3 472 aa12.84□□□□□ -0.35
C4orf46-201ENST00000379205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.35
C4orf46-201ENST00000379205 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
C4orf46-201ENST00000379205 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
C4orf46-201ENST00000379205 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
C4orf46-201ENST00000379205 MYOM3Q5VTT5 1437 aa12.83□□□□□ -0.36
C4orf46-201ENST00000379205 NESP48681 1621 aa12.83□□□□□ -0.36
C4orf46-201ENST00000379205 CCDC146Q8IYE0 955 aa12.83□□□□□ -0.36
C4orf46-201ENST00000379205 NLRP13Q86W25 1043 aa12.83□□□□□ -0.36
C4orf46-201ENST00000379205 RNF123Q5XPI4 1314 aa12.83□□□□□ -0.36
C4orf46-201ENST00000379205 TDRD9Q8NDG6 1382 aaKnown RBP12.82□□□□□ -0.36
C4orf46-201ENST00000379205 PNNQ9H307 717 aaKnown RBP12.82□□□□□ -0.36
C4orf46-201ENST00000379205 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
C4orf46-201ENST00000379205 PTPN23Q9H3S7 1636 aa12.81□□□□□ -0.36
C4orf46-201ENST00000379205 ARID3AQ99856 593 aa12.81□□□□□ -0.36
C4orf46-201ENST00000379205 RAD54L2Q9Y4B4 1467 aa12.81□□□□□ -0.36
C4orf46-201ENST00000379205 RALBP1Q15311 655 aa12.8□□□□□ -0.36
C4orf46-201ENST00000379205 CASKIN1Q8WXD9 1431 aa12.8□□□□□ -0.36
C4orf46-201ENST00000379205 FGD5Q6ZNL6 1462 aa12.8□□□□□ -0.36
C4orf46-201ENST00000379205 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
C4orf46-201ENST00000379205 KIF15Q9NS87 1388 aa12.8□□□□□ -0.36
C4orf46-201ENST00000379205 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.79□□□□□ -0.36
C4orf46-201ENST00000379205 MAP3K1Q13233 1512 aa12.79□□□□□ -0.36
C4orf46-201ENST00000379205 BECN1Q14457 450 aa12.79□□□□□ -0.36
C4orf46-201ENST00000379205 FAM43AQ8N2R8 423 aa12.78□□□□□ -0.36
C4orf46-201ENST00000379205 CFDP1Q9UEE9 299 aaPredicted RBP12.78□□□□□ -0.36
C4orf46-201ENST00000379205 KTN1Q86UP2 1357 aaKnown RBP12.78□□□□□ -0.36
C4orf46-201ENST00000379205 HSP90AA2PQ14568 343 aaPredicted RBP12.78□□□□□ -0.36
C4orf46-201ENST00000379205 DHX29Q7Z478 1369 aaKnown RBP12.78□□□□□ -0.36
C4orf46-201ENST00000379205 UPF2Q9HAU5 1272 aaKnown RBP12.78□□□□□ -0.36
C4orf46-201ENST00000379205 RRAGDQ9NQL2 400 aaPredicted RBP12.78□□□□□ -0.36
C4orf46-201ENST00000379205 CENPQQ7L2Z9 268 aaPredicted RBP12.77□□□□□ -0.36
C4orf46-201ENST00000379205 ADAMTS8Q9UP79 889 aa12.77□□□□□ -0.36
C4orf46-201ENST00000379205 HSP90AA1P07900 732 aaKnown RBP12.76□□□□□ -0.37
C4orf46-201ENST00000379205 PDE3BQ13370 1112 aa12.76□□□□□ -0.37
C4orf46-201ENST00000379205 PANK3Q9H999 370 aa12.76□□□□□ -0.37
C4orf46-201ENST00000379205 BIVM-ERCC5R4GMW8 1640 aa12.75□□□□□ -0.37
C4orf46-201ENST00000379205 FYCO1Q9BQS8 1478 aa12.75□□□□□ -0.37
C4orf46-201ENST00000379205 ANKRD30BQ9BXX2 1392 aa12.75□□□□□ -0.37
C4orf46-201ENST00000379205 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
C4orf46-201ENST00000379205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.74□□□□□ -0.37
C4orf46-201ENST00000379205 FBLN2P98095 1184 aa12.74□□□□□ -0.37
C4orf46-201ENST00000379205 PANK2Q9BZ23 570 aa12.74□□□□□ -0.37
C4orf46-201ENST00000379205 GOLGA6L3A6NEY3 463 aa12.74□□□□□ -0.37
C4orf46-201ENST00000379205 BCAR3O75815 825 aa12.74□□□□□ -0.37
C4orf46-201ENST00000379205 COG6Q9Y2V7 657 aa12.74□□□□□ -0.37
C4orf46-201ENST00000379205 TNNT2P45379 298 aaPredicted RBP12.73□□□□□ -0.37
C4orf46-201ENST00000379205 C8orf34Q49A92 452 aa12.73□□□□□ -0.37
C4orf46-201ENST00000379205 BCL2L13Q9BXK5 485 aa12.73□□□□□ -0.37
C4orf46-201ENST00000379205 ROCK2O75116 1388 aaKnown RBP12.73□□□□□ -0.37
C4orf46-201ENST00000379205 SEC24BO95487 1268 aa12.73□□□□□ -0.37
C4orf46-201ENST00000379205 NBPF1Q3BBV0 1214 aa12.73□□□□□ -0.37
C4orf46-201ENST00000379205 ZMYND15Q9H091 742 aa12.73□□□□□ -0.37
C4orf46-201ENST00000379205 CADPSQ9ULU8 1353 aa12.73□□□□□ -0.37
C4orf46-201ENST00000379205 L1TD1Q5T7N2 865 aaKnown RBP12.72□□□□□ -0.37
C4orf46-201ENST00000379205 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
C4orf46-201ENST00000379205 TRIM44Q96DX7 344 aaPredicted RBP12.72□□□□□ -0.37
C4orf46-201ENST00000379205 BRD4O60885 1362 aaPredicted RBP12.71□□□□□ -0.37
C4orf46-201ENST00000379205 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
C4orf46-201ENST00000379205 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms