RNA–Protein interactions for RNA: ENST00000379205.4

C4orf46-201, Transcript of chromosome 4 open reading frame 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4orf46, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-201ENST00000379205 NISCHQ9Y2I1 1504 aa17.76■□□□□ 0.43
C4orf46-201ENST00000379205 SUPT5HO00267 1087 aaKnown RBP16.81■□□□□ 0.28
C4orf46-201ENST00000379205 SHROOM4Q9ULL8 1493 aa16.76■□□□□ 0.27
C4orf46-201ENST00000379205 PCGF6Q9BYE7 350 aa16.59■□□□□ 0.25
C4orf46-201ENST00000379205 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
C4orf46-201ENST00000379205 HRCP23327 699 aa16.49■□□□□ 0.23
C4orf46-201ENST00000379205 DCAF8L2P0C7V8 631 aa16.21■□□□□ 0.19
C4orf46-201ENST00000379205 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
C4orf46-201ENST00000379205 LOC105371045A0A1W2PR82 267 aa16■□□□□ 0.15
C4orf46-201ENST00000379205 EHMT2Q96KQ7 1210 aa15.98■□□□□ 0.15
C4orf46-201ENST00000379205 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.13
C4orf46-201ENST00000379205 PELP1Q8IZL8 1130 aaKnown RBP15.83■□□□□ 0.12
C4orf46-201ENST00000379205 FAM9AQ8IZU1 332 aaPredicted RBP15.71■□□□□ 0.11
C4orf46-201ENST00000379205 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
C4orf46-201ENST00000379205 TRIM26Q12899 539 aaPredicted RBP15.7■□□□□ 0.1
C4orf46-201ENST00000379205 TTBK1Q5TCY1 1321 aaPredicted RBP15.51■□□□□ 0.07
C4orf46-201ENST00000379205 ZEB1P37275 1124 aaPredicted RBP15.5■□□□□ 0.07
C4orf46-201ENST00000379205 GTF3C3Q9Y5Q9 886 aa15.4■□□□□ 0.06
C4orf46-201ENST00000379205 YTHDC1Q96MU7 727 aaKnown RBP15.39■□□□□ 0.05
C4orf46-201ENST00000379205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
C4orf46-201ENST00000379205 CCER1Q8TC90 406 aaPredicted RBP15.37■□□□□ 0.05
C4orf46-201ENST00000379205 NEUROD1Q13562 356 aa15.37■□□□□ 0.05
C4orf46-201ENST00000379205 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
C4orf46-201ENST00000379205 DCAF1Q9Y4B6 1507 aa15.31■□□□□ 0.04
C4orf46-201ENST00000379205 ACIN1Q9UKV3 1341 aaKnown RBP15.31■□□□□ 0.04
C4orf46-201ENST00000379205 CENPBP07199 599 aaPredicted RBP15.29■□□□□ 0.04
C4orf46-201ENST00000379205 CCDC180Q9P1Z9 1646 aa15.28■□□□□ 0.04
C4orf46-201ENST00000379205 DIEXFQ68CQ4 756 aaKnown RBP15.21■□□□□ 0.02
C4orf46-201ENST00000379205 MYT1Q01538 1121 aa15.14■□□□□ 0.01
C4orf46-201ENST00000379205 ZCCHC6Q5VYS8 1495 aaKnown RBP14.99□□□□□ -0.01
C4orf46-201ENST00000379205 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
C4orf46-201ENST00000379205 MIER1Q8N108 512 aa14.8□□□□□ -0.04
C4orf46-201ENST00000379205 RANGAP1P46060 587 aaPredicted RBP14.8□□□□□ -0.04
C4orf46-201ENST00000379205 ZNF316A6NFI3 1004 aaPredicted RBP14.79□□□□□ -0.04
C4orf46-201ENST00000379205 ABCC9O60706 1549 aa14.74□□□□□ -0.05
C4orf46-201ENST00000379205 UBTFP17480 764 aaKnown RBP14.72□□□□□ -0.05
C4orf46-201ENST00000379205 BCANQ96GW7 911 aa14.68□□□□□ -0.06
C4orf46-201ENST00000379205 APLP2Q06481 763 aa14.52□□□□□ -0.09
C4orf46-201ENST00000379205 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
C4orf46-201ENST00000379205 BCL11AQ9H165 835 aa14.48□□□□□ -0.09
C4orf46-201ENST00000379205 SUPT16HQ9Y5B9 1047 aaKnown RBP14.46□□□□□ -0.09
C4orf46-201ENST00000379205 ANP32EQ9BTT0 268 aa14.42□□□□□ -0.1
C4orf46-201ENST00000379205 ITGAEP38570 1179 aa14.41□□□□□ -0.1
C4orf46-201ENST00000379205 RB1CC1Q8TDY2 1594 aa14.39□□□□□ -0.11
C4orf46-201ENST00000379205 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
C4orf46-201ENST00000379205 TSHZ2Q9NRE2 1034 aa14.38□□□□□ -0.11
C4orf46-201ENST00000379205 FKBP8Q14318 412 aa14.35□□□□□ -0.11
C4orf46-201ENST00000379205 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
C4orf46-201ENST00000379205 ERICH6Q7L0X2 663 aa14.31□□□□□ -0.12
C4orf46-201ENST00000379205 NEFLP07196 543 aa14.3□□□□□ -0.12
C4orf46-201ENST00000379205 KCNH8Q96L42 1107 aa14.29□□□□□ -0.12
C4orf46-201ENST00000379205 CEP162Q5TB80 1403 aa14.28□□□□□ -0.12
C4orf46-201ENST00000379205 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
C4orf46-201ENST00000379205 TRIM52Q96A61 297 aa14.21□□□□□ -0.13
C4orf46-201ENST00000379205 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.14
C4orf46-201ENST00000379205 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
C4orf46-201ENST00000379205 DDX10Q13206 875 aaKnown RBP14.18□□□□□ -0.14
C4orf46-201ENST00000379205 SOGA1O94964 1423 aa14.16□□□□□ -0.14
C4orf46-201ENST00000379205 IRX6P78412 446 aaPredicted RBP14.16□□□□□ -0.14
C4orf46-201ENST00000379205 NACADO15069 1562 aa14.15□□□□□ -0.14
C4orf46-201ENST00000379205 RBM19Q9Y4C8 960 aaKnown RBP14.13□□□□□ -0.15
C4orf46-201ENST00000379205 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
C4orf46-201ENST00000379205 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
C4orf46-201ENST00000379205 ATP1B4Q9UN42 357 aaPredicted RBP14.07□□□□□ -0.16
C4orf46-201ENST00000379205 PRKCSHP14314 528 aaPredicted RBP14.06□□□□□ -0.16
C4orf46-201ENST00000379205 CLSPNQ9HAW4 1339 aa14.06□□□□□ -0.16
C4orf46-201ENST00000379205 CNGB1Q14028 1251 aaPredicted RBP14.05□□□□□ -0.16
C4orf46-201ENST00000379205 TNIKQ9UKE5 1360 aa14.05□□□□□ -0.16
C4orf46-201ENST00000379205 RUSC2Q8N2Y8 1516 aa14.05□□□□□ -0.16
C4orf46-201ENST00000379205 MROH2BQ7Z745 1585 aa14.04□□□□□ -0.16
C4orf46-201ENST00000379205 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
C4orf46-201ENST00000379205 NBR1Q14596 966 aa13.98□□□□□ -0.17
C4orf46-201ENST00000379205 CLIP1P30622 1438 aa13.97□□□□□ -0.17
C4orf46-201ENST00000379205 CDK11AQ9UQ88 783 aaPredicted RBP13.97□□□□□ -0.17
C4orf46-201ENST00000379205 WIZO95785 1651 aa13.95□□□□□ -0.18
C4orf46-201ENST00000379205 ANP32CO43423 234 aa13.94□□□□□ -0.18
C4orf46-201ENST00000379205 SIN3AQ96ST3 1273 aa13.94□□□□□ -0.18
C4orf46-201ENST00000379205 FAM50AQ14320 339 aaKnown RBP13.93□□□□□ -0.18
C4orf46-201ENST00000379205 HNRNPUQ00839 825 aaKnown RBP eCLIP13.91□□□□□ -0.18
C4orf46-201ENST00000379205 KANK4Q5T7N3 995 aaPredicted RBP13.91□□□□□ -0.18
C4orf46-201ENST00000379205 MSH5O43196 834 aa13.9□□□□□ -0.18
C4orf46-201ENST00000379205 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
C4orf46-201ENST00000379205 GOLGA3Q08378 1498 aa13.88□□□□□ -0.19
C4orf46-201ENST00000379205 DHX57Q6P158 1386 aaKnown RBP13.88□□□□□ -0.19
C4orf46-201ENST00000379205 DEKP35659 375 aaKnown RBP13.83□□□□□ -0.2
C4orf46-201ENST00000379205 RTN4Q9NQC3 1192 aaKnown RBP13.82□□□□□ -0.2
C4orf46-201ENST00000379205 B4GALNT3Q6L9W6 998 aa13.78□□□□□ -0.2
C4orf46-201ENST00000379205 P3H3Q8IVL6 736 aa13.78□□□□□ -0.2
C4orf46-201ENST00000379205 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
C4orf46-201ENST00000379205 POLR3GLQ9BT43 218 aa13.77□□□□□ -0.21
C4orf46-201ENST00000379205 VPS8Q8N3P4 1428 aa13.77□□□□□ -0.21
C4orf46-201ENST00000379205 FAM9BQ8IZU0 186 aa13.77□□□□□ -0.21
C4orf46-201ENST00000379205 RTL5Q5HYW3 569 aaPredicted RBP13.74□□□□□ -0.21
C4orf46-201ENST00000379205 NPM2Q86SE8 214 aaKnown RBP13.72□□□□□ -0.21
C4orf46-201ENST00000379205 CCDC136Q96JN2 1154 aa13.72□□□□□ -0.21
C4orf46-201ENST00000379205 EEA1Q15075 1411 aa13.72□□□□□ -0.21
C4orf46-201ENST00000379205 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.21
C4orf46-201ENST00000379205 CEP164Q9UPV0 1460 aa13.7□□□□□ -0.22
C4orf46-201ENST00000379205 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
C4orf46-201ENST00000379205 RAB3GAP2Q9H2M9 1393 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms