RNA–Protein interactions for RNA: ENST00000370904.6

IGSF1-205, Transcript of immunoglobulin superfamily member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene IGSF1, Length 5,413 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF1-205ENST00000370904 FRAT1Q92837 279 aaPredicted RBP11.84□□□□□ -0.51
IGSF1-205ENST00000370904 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
IGSF1-205ENST00000370904 EFCAB2Q5VUJ9 269 aa11.83□□□□□ -0.52
IGSF1-205ENST00000370904 U2SURPO15042 1029 aaKnown RBP11.82□□□□□ -0.52
IGSF1-205ENST00000370904 GGT6Q6P531 493 aa11.82□□□□□ -0.52
IGSF1-205ENST00000370904 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
IGSF1-205ENST00000370904 RGS3P49796 1198 aa11.81□□□□□ -0.52
IGSF1-205ENST00000370904 RALBP1Q15311 655 aa11.81□□□□□ -0.52
IGSF1-205ENST00000370904 MORC1Q86VD1 984 aa11.81□□□□□ -0.52
IGSF1-205ENST00000370904 ERICH3Q5RHP9 1530 aa11.8□□□□□ -0.52
IGSF1-205ENST00000370904 SRPK2P78362 688 aaKnown RBP11.8□□□□□ -0.52
IGSF1-205ENST00000370904 SAFB2Q14151 953 aaKnown RBP eCLIP11.8□□□□□ -0.52
IGSF1-205ENST00000370904 CUX1P39880 1505 aa11.78□□□□□ -0.52
IGSF1-205ENST00000370904 LRRC9Q6ZRR7 1453 aa11.78□□□□□ -0.52
IGSF1-205ENST00000370904 MLECQ14165 292 aa11.78□□□□□ -0.52
IGSF1-205ENST00000370904 NOP58Q9Y2X3 529 aaKnown RBP11.77□□□□□ -0.52
IGSF1-205ENST00000370904 PHLDB1Q86UU1 1377 aa11.77□□□□□ -0.53
IGSF1-205ENST00000370904 RSPH4AQ5TD94 716 aa11.77□□□□□ -0.53
IGSF1-205ENST00000370904 FGD6Q6ZV73 1430 aa11.76□□□□□ -0.53
IGSF1-205ENST00000370904 PNNQ9H307 717 aaKnown RBP11.76□□□□□ -0.53
IGSF1-205ENST00000370904 EIF3AQ14152 1382 aaKnown RBP11.76□□□□□ -0.53
IGSF1-205ENST00000370904 TOP2BQ02880 1626 aa11.76□□□□□ -0.53
IGSF1-205ENST00000370904 STK26Q9P289 416 aa11.76□□□□□ -0.53
IGSF1-205ENST00000370904 CFTRP13569 1480 aa11.75□□□□□ -0.53
IGSF1-205ENST00000370904 KIF3BO15066 747 aa11.75□□□□□ -0.53
IGSF1-205ENST00000370904 MYOM3Q5VTT5 1437 aa11.74□□□□□ -0.53
IGSF1-205ENST00000370904 ARAP1Q96P48 1450 aa11.74□□□□□ -0.53
IGSF1-205ENST00000370904 SPAG9O60271 1321 aaKnown RBP11.74□□□□□ -0.53
IGSF1-205ENST00000370904 MS4A1P11836 297 aa11.74□□□□□ -0.53
IGSF1-205ENST00000370904 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
IGSF1-205ENST00000370904 CASC1Q6TDU7 716 aa11.73□□□□□ -0.53
IGSF1-205ENST00000370904 CASKIN1Q8WXD9 1431 aa11.73□□□□□ -0.53
IGSF1-205ENST00000370904 RCAN3Q9UKA8 241 aa11.73□□□□□ -0.53
IGSF1-205ENST00000370904 ERICH6BQ5W0A0 696 aa11.73□□□□□ -0.53
IGSF1-205ENST00000370904 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
IGSF1-205ENST00000370904 AQRO60306 1485 aaKnown RBP eCLIP11.72□□□□□ -0.53
IGSF1-205ENST00000370904 CCDC144AA2RUR9 1427 aa11.72□□□□□ -0.53
IGSF1-205ENST00000370904 PTPRGP23470 1445 aa11.72□□□□□ -0.53
IGSF1-205ENST00000370904 A0A0G2JS52 829 aa11.71□□□□□ -0.53
IGSF1-205ENST00000370904 HDGFP51858 240 aaKnown RBP11.71□□□□□ -0.53
IGSF1-205ENST00000370904 HMGXB3Q12766 1538 aa11.71□□□□□ -0.54
IGSF1-205ENST00000370904 KIF15Q9NS87 1388 aa11.71□□□□□ -0.54
IGSF1-205ENST00000370904 CHMP4BQ9H444 224 aaKnown RBP11.7□□□□□ -0.54
IGSF1-205ENST00000370904 NCOA2Q15596 1464 aa11.7□□□□□ -0.54
IGSF1-205ENST00000370904 FYCO1Q9BQS8 1478 aa11.7□□□□□ -0.54
IGSF1-205ENST00000370904 HDGFL2Q7Z4V5 671 aaPredicted RBP11.7□□□□□ -0.54
IGSF1-205ENST00000370904 RRBP1Q9P2E9 1410 aaKnown RBP11.69□□□□□ -0.54
IGSF1-205ENST00000370904 ST20-MTHFSA0A0A6YYL1 179 aa11.69□□□□□ -0.54
IGSF1-205ENST00000370904 GOLGA6L22H0YM25 854 aa11.69□□□□□ -0.54
IGSF1-205ENST00000370904 LMOD2Q6P5Q4 547 aa11.68□□□□□ -0.54
IGSF1-205ENST00000370904 UACAQ9BZF9 1416 aa11.68□□□□□ -0.54
IGSF1-205ENST00000370904 SOX12O15370 315 aa11.68□□□□□ -0.54
IGSF1-205ENST00000370904 USP47Q96K76 1375 aa11.68□□□□□ -0.54
IGSF1-205ENST00000370904 PRXQ9BXM0 1461 aa11.68□□□□□ -0.54
IGSF1-205ENST00000370904 HAP1P54257 671 aaPredicted RBP11.68□□□□□ -0.54
IGSF1-205ENST00000370904 NUTM2DQ5VT03 806 aaPredicted RBP11.67□□□□□ -0.54
IGSF1-205ENST00000370904 NLRP13Q86W25 1043 aa11.67□□□□□ -0.54
IGSF1-205ENST00000370904 MYBBP1AQ9BQG0 1328 aaKnown RBP11.67□□□□□ -0.54
IGSF1-205ENST00000370904 NESP48681 1621 aa11.67□□□□□ -0.54
IGSF1-205ENST00000370904 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
IGSF1-205ENST00000370904 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
IGSF1-205ENST00000370904 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.54
IGSF1-205ENST00000370904 TSHZ2Q9NRE2 1034 aa11.66□□□□□ -0.54
IGSF1-205ENST00000370904 CC2D2AQ9P2K1 1620 aa11.66□□□□□ -0.54
IGSF1-205ENST00000370904 NCLP19338 710 aaKnown RBP11.66□□□□□ -0.54
IGSF1-205ENST00000370904 WASHC2CQ9Y4E1 1318 aa11.66□□□□□ -0.54
IGSF1-205ENST00000370904 CCDC146Q8IYE0 955 aa11.65□□□□□ -0.54
IGSF1-205ENST00000370904 EFCAB5A4FU69 1503 aa11.65□□□□□ -0.54
IGSF1-205ENST00000370904 PRKRIP1Q9H875 184 aaPredicted RBP11.65□□□□□ -0.54
IGSF1-205ENST00000370904 PANK3Q9H999 370 aa11.64□□□□□ -0.55
IGSF1-205ENST00000370904 GRIN2BQ13224 1484 aa11.64□□□□□ -0.55
IGSF1-205ENST00000370904 PRKCSHP14314 528 aaPredicted RBP11.63□□□□□ -0.55
IGSF1-205ENST00000370904 TOPBP1Q92547 1522 aa11.62□□□□□ -0.55
IGSF1-205ENST00000370904 HSP90AB1P08238 724 aaKnown RBP11.62□□□□□ -0.55
IGSF1-205ENST00000370904 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
IGSF1-205ENST00000370904 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
IGSF1-205ENST00000370904 TRIM44Q96DX7 344 aaPredicted RBP11.61□□□□□ -0.55
IGSF1-205ENST00000370904 PDE3BQ13370 1112 aa11.61□□□□□ -0.55
IGSF1-205ENST00000370904 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
IGSF1-205ENST00000370904 EHBP1L1Q8N3D4 1523 aa11.61□□□□□ -0.55
IGSF1-205ENST00000370904 TCERG1O14776 1098 aaKnown RBP11.61□□□□□ -0.55
IGSF1-205ENST00000370904 TRAK1Q9UPV9 953 aa11.61□□□□□ -0.55
IGSF1-205ENST00000370904 POLA1P09884 1462 aaPredicted RBP11.6□□□□□ -0.55
IGSF1-205ENST00000370904 OS9Q13438 667 aaPredicted RBP11.6□□□□□ -0.55
IGSF1-205ENST00000370904 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
IGSF1-205ENST00000370904 IPO8O15397 1037 aaKnown RBP11.6□□□□□ -0.55
IGSF1-205ENST00000370904 ITPRIPQ8IWB1 547 aa11.6□□□□□ -0.55
IGSF1-205ENST00000370904 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
IGSF1-205ENST00000370904 MRC2Q9UBG0 1479 aa11.59□□□□□ -0.55
IGSF1-205ENST00000370904 TERF2IPQ9NYB0 399 aa11.59□□□□□ -0.55
IGSF1-205ENST00000370904 ZBED9Q6R2W3 1325 aa11.59□□□□□ -0.55
IGSF1-205ENST00000370904 TPRNQ4KMQ1 711 aa11.59□□□□□ -0.55
IGSF1-205ENST00000370904 HSCBQ8IWL3 235 aa11.59□□□□□ -0.55
IGSF1-205ENST00000370904 DNMBPQ6XZF7 1577 aa11.59□□□□□ -0.55
IGSF1-205ENST00000370904 CCDC7Q96M83 1385 aa11.58□□□□□ -0.56
IGSF1-205ENST00000370904 CALD1Q05682 793 aaKnown RBP11.58□□□□□ -0.56
IGSF1-205ENST00000370904 RWDD1Q9H446 243 aaPredicted RBP11.58□□□□□ -0.56
IGSF1-205ENST00000370904 SPRYD3Q8NCJ5 442 aa11.57□□□□□ -0.56
IGSF1-205ENST00000370904 CNTLNQ9NXG0 1405 aa11.57□□□□□ -0.56
IGSF1-205ENST00000370904 ANKRD50Q9ULJ7 1429 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms