RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
C2CD4A-201ENST00000355522 CASKIN1Q8WXD9 1431 aa21.62■■□□□ 1.05
C2CD4A-201ENST00000355522 EXOC6Q8TAG9 804 aa21.61■■□□□ 1.05
C2CD4A-201ENST00000355522 FMN1Q68DA7 1419 aa21.61■■□□□ 1.05
C2CD4A-201ENST00000355522 CNTLNQ9NXG0 1405 aa21.6■■□□□ 1.05
C2CD4A-201ENST00000355522 ARXQ96QS3 562 aa21.6■■□□□ 1.05
C2CD4A-201ENST00000355522 PDE4AP27815 886 aa21.6■■□□□ 1.05
C2CD4A-201ENST00000355522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.6■■□□□ 1.05
C2CD4A-201ENST00000355522 PPM1GO15355 546 aaPredicted RBP21.59■■□□□ 1.05
C2CD4A-201ENST00000355522 SKAP1Q86WV1 359 aa21.58■■□□□ 1.05
C2CD4A-201ENST00000355522 UACAQ9BZF9 1416 aa21.57■■□□□ 1.04
C2CD4A-201ENST00000355522 CCDC7Q96M83 1385 aa21.56■■□□□ 1.04
C2CD4A-201ENST00000355522 MYOM3Q5VTT5 1437 aa21.55■■□□□ 1.04
C2CD4A-201ENST00000355522 CFDP1Q9UEE9 299 aaPredicted RBP21.55■■□□□ 1.04
C2CD4A-201ENST00000355522 CDK13Q14004 1512 aaKnown RBP21.54■■□□□ 1.04
C2CD4A-201ENST00000355522 KIF7Q2M1P5 1343 aa21.53■■□□□ 1.04
C2CD4A-201ENST00000355522 PKD2Q13563 968 aa21.53■■□□□ 1.04
C2CD4A-201ENST00000355522 GAPVD1Q14C86 1478 aa21.53■■□□□ 1.04
C2CD4A-201ENST00000355522 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
C2CD4A-201ENST00000355522 FYCO1Q9BQS8 1478 aa21.51■■□□□ 1.03
C2CD4A-201ENST00000355522 PLIN1O60240 522 aa21.5■■□□□ 1.03
C2CD4A-201ENST00000355522 HFM1A2PYH4 1435 aa21.5■■□□□ 1.03
C2CD4A-201ENST00000355522 TCERG1O14776 1098 aaKnown RBP21.49■■□□□ 1.03
C2CD4A-201ENST00000355522 GSE1Q14687 1217 aa21.47■■□□□ 1.03
C2CD4A-201ENST00000355522 URB2Q14146 1524 aaKnown RBP21.47■■□□□ 1.03
C2CD4A-201ENST00000355522 RCAN3Q9UKA8 241 aa21.46■■□□□ 1.03
C2CD4A-201ENST00000355522 CHMP7Q8WUX9 453 aaPredicted RBP21.46■■□□□ 1.03
C2CD4A-201ENST00000355522 DCAF11Q8TEB1 546 aa21.45■■□□□ 1.02
C2CD4A-201ENST00000355522 CARD11Q9BXL7 1154 aa21.44■■□□□ 1.02
C2CD4A-201ENST00000355522 USP35Q9P2H5 1018 aa21.44■■□□□ 1.02
C2CD4A-201ENST00000355522 DDRGK1Q96HY6 314 aa21.43■■□□□ 1.02
C2CD4A-201ENST00000355522 RRP1P56182 461 aaKnown RBP21.43■■□□□ 1.02
C2CD4A-201ENST00000355522 FRAT1Q92837 279 aaPredicted RBP21.42■■□□□ 1.02
C2CD4A-201ENST00000355522 ABCA10Q8WWZ4 1543 aa21.42■■□□□ 1.02
C2CD4A-201ENST00000355522 KDM6BO15054 1643 aa21.42■■□□□ 1.02
C2CD4A-201ENST00000355522 PTPN23Q9H3S7 1636 aa21.42■■□□□ 1.02
C2CD4A-201ENST00000355522 NFKBIBQ15653 356 aa21.41■■□□□ 1.02
C2CD4A-201ENST00000355522 SMG6Q86US8 1419 aaKnown RBP21.41■■□□□ 1.02
C2CD4A-201ENST00000355522 HNRNPMP52272 730 aaKnown RBP eCLIP21.4■■□□□ 1.02
C2CD4A-201ENST00000355522 CC2D1BQ5T0F9 858 aaKnown RBP21.4■■□□□ 1.02
C2CD4A-201ENST00000355522 RGS3P49796 1198 aa21.4■■□□□ 1.02
C2CD4A-201ENST00000355522 MAGI3Q5TCQ9 1506 aa21.4■■□□□ 1.02
C2CD4A-201ENST00000355522 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.01
C2CD4A-201ENST00000355522 ST20-MTHFSA0A0A6YYL1 179 aa21.38■■□□□ 1.01
C2CD4A-201ENST00000355522 BACH2Q9BYV9 841 aa21.38■■□□□ 1.01
C2CD4A-201ENST00000355522 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
C2CD4A-201ENST00000355522 MAP3K1Q13233 1512 aa21.36■■□□□ 1.01
C2CD4A-201ENST00000355522 CDCA7LQ96GN5 454 aa21.32■■□□□ 1
C2CD4A-201ENST00000355522 CFAP43Q8NDM7 1665 aa21.32■■□□□ 1
C2CD4A-201ENST00000355522 PRG4Q92954 1404 aaPredicted RBP21.32■■□□□ 1
C2CD4A-201ENST00000355522 PNISRQ8TF01 805 aaKnown RBP21.3■■□□□ 1
C2CD4A-201ENST00000355522 CRBNQ96SW2 442 aa21.3■■□□□ 1
C2CD4A-201ENST00000355522 NCOA1Q15788 1441 aa21.29■■□□□ 1
C2CD4A-201ENST00000355522 PRDM2Q13029 1718 aa21.29■■□□□ 1
C2CD4A-201ENST00000355522 FRAT2O75474 233 aaPredicted RBP21.28■■□□□ 1
C2CD4A-201ENST00000355522 NUP155O75694 1391 aa21.28■■□□□ 1
C2CD4A-201ENST00000355522 UBE2Q2Q8WVN8 375 aa21.27■■□□□ 1
C2CD4A-201ENST00000355522 DENND4BO75064 1496 aaPredicted RBP21.27■■□□□ 1
C2CD4A-201ENST00000355522 THOC2Q8NI27 1593 aaKnown RBP21.27■■□□□ 1
C2CD4A-201ENST00000355522 USP47Q96K76 1375 aa21.26■□□□□ 0.99
C2CD4A-201ENST00000355522 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
C2CD4A-201ENST00000355522 TSPY4P0CV99 314 aa21.26■□□□□ 0.99
C2CD4A-201ENST00000355522 TSPY10P0CW01 314 aa21.26■□□□□ 0.99
C2CD4A-201ENST00000355522 EFCAB5A4FU69 1503 aa21.25■□□□□ 0.99
C2CD4A-201ENST00000355522 EPRSP07814 1512 aaKnown RBP21.25■□□□□ 0.99
C2CD4A-201ENST00000355522 ZNF608Q9ULD9 1512 aaPredicted RBP21.25■□□□□ 0.99
C2CD4A-201ENST00000355522 NBPF1Q3BBV0 1214 aa21.24■□□□□ 0.99
C2CD4A-201ENST00000355522 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
C2CD4A-201ENST00000355522 MS4A1P11836 297 aa21.23■□□□□ 0.99
C2CD4A-201ENST00000355522 ANKRD30BQ9BXX2 1392 aa21.22■□□□□ 0.99
C2CD4A-201ENST00000355522 SLKQ9H2G2 1235 aaPredicted RBP21.22■□□□□ 0.99
C2CD4A-201ENST00000355522 SUPT6HQ7KZ85 1726 aaKnown RBP21.2■□□□□ 0.98
C2CD4A-201ENST00000355522 WASHC2CQ9Y4E1 1318 aa21.2■□□□□ 0.98
C2CD4A-201ENST00000355522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.19■□□□□ 0.98
C2CD4A-201ENST00000355522 LRRIQ1Q96JM4 1722 aa21.19■□□□□ 0.98
C2CD4A-201ENST00000355522 NAP1L5Q96NT1 182 aaPredicted RBP21.19■□□□□ 0.98
C2CD4A-201ENST00000355522 ABCC5O15440 1437 aa21.18■□□□□ 0.98
C2CD4A-201ENST00000355522 DAPK1P53355 1430 aa21.16■□□□□ 0.98
C2CD4A-201ENST00000355522 RNF123Q5XPI4 1314 aa21.16■□□□□ 0.98
C2CD4A-201ENST00000355522 JPH4Q96JJ6 628 aa21.16■□□□□ 0.98
C2CD4A-201ENST00000355522 KDM5BQ9UGL1 1544 aa21.16■□□□□ 0.98
C2CD4A-201ENST00000355522 CTTNBP2Q8WZ74 1663 aa21.15■□□□□ 0.98
C2CD4A-201ENST00000355522 SPRYD3Q8NCJ5 442 aa21.15■□□□□ 0.98
C2CD4A-201ENST00000355522 PLB1Q6P1J6 1458 aa21.15■□□□□ 0.98
C2CD4A-201ENST00000355522 ARID4BQ4LE39 1312 aaPredicted RBP21.15■□□□□ 0.98
C2CD4A-201ENST00000355522 EHBP1L1Q8N3D4 1523 aa21.15■□□□□ 0.98
C2CD4A-201ENST00000355522 UGGT2Q9NYU1 1516 aa21.14■□□□□ 0.97
C2CD4A-201ENST00000355522 C20orf194Q5TEA3 1177 aa21.13■□□□□ 0.97
C2CD4A-201ENST00000355522 MYBBP1AQ9BQG0 1328 aaKnown RBP21.12■□□□□ 0.97
C2CD4A-201ENST00000355522 RSPH6AQ9H0K4 717 aa21.12■□□□□ 0.97
C2CD4A-201ENST00000355522 GZF1Q9H116 711 aaPredicted RBP21.11■□□□□ 0.97
C2CD4A-201ENST00000355522 GLIPR1L2Q4G1C9 344 aa21.1■□□□□ 0.97
C2CD4A-201ENST00000355522 LAMC3Q9Y6N6 1575 aa21.09■□□□□ 0.97
C2CD4A-201ENST00000355522 CUL7Q14999 1698 aa21.09■□□□□ 0.97
C2CD4A-201ENST00000355522 CANXP27824 592 aaKnown RBP21.09■□□□□ 0.97
C2CD4A-201ENST00000355522 FAM161AQ3B820 660 aa21.08■□□□□ 0.96
C2CD4A-201ENST00000355522 ROCK2O75116 1388 aaKnown RBP21.08■□□□□ 0.96
C2CD4A-201ENST00000355522 TNNT2P45379 298 aaPredicted RBP21.07■□□□□ 0.96
C2CD4A-201ENST00000355522 KIF15Q9NS87 1388 aa21.07■□□□□ 0.96
C2CD4A-201ENST00000355522 VSIG10Q8N0Z9 540 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms