RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
C2CD4A-201ENST00000355522 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
C2CD4A-201ENST00000355522 SUPT5HO00267 1087 aaKnown RBP27.8■■■□□ 2.04
C2CD4A-201ENST00000355522 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
C2CD4A-201ENST00000355522 HRCP23327 699 aa27.04■■□□□ 1.92
C2CD4A-201ENST00000355522 PCGF6Q9BYE7 350 aa27.03■■□□□ 1.92
C2CD4A-201ENST00000355522 PPARGC1BQ86YN6 1023 aaKnown RBP26.91■■□□□ 1.9
C2CD4A-201ENST00000355522 EHMT2Q96KQ7 1210 aa26.46■■□□□ 1.83
C2CD4A-201ENST00000355522 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
C2CD4A-201ENST00000355522 LOC105371045A0A1W2PR82 267 aa26.25■■□□□ 1.79
C2CD4A-201ENST00000355522 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.78
C2CD4A-201ENST00000355522 PELP1Q8IZL8 1130 aaKnown RBP26.05■■□□□ 1.76
C2CD4A-201ENST00000355522 FAM9AQ8IZU1 332 aaPredicted RBP26■■□□□ 1.75
C2CD4A-201ENST00000355522 ZCCHC6Q5VYS8 1495 aaKnown RBP25.76■■□□□ 1.71
C2CD4A-201ENST00000355522 TRIM26Q12899 539 aaPredicted RBP25.76■■□□□ 1.71
C2CD4A-201ENST00000355522 SCAF1Q9H7N4 1312 aaKnown RBP25.67■■□□□ 1.7
C2CD4A-201ENST00000355522 TTBK1Q5TCY1 1321 aaPredicted RBP25.51■■□□□ 1.67
C2CD4A-201ENST00000355522 ZEB1P37275 1124 aaPredicted RBP25.5■■□□□ 1.67
C2CD4A-201ENST00000355522 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
C2CD4A-201ENST00000355522 DCAF1Q9Y4B6 1507 aa25.35■■□□□ 1.65
C2CD4A-201ENST00000355522 GTF3C3Q9Y5Q9 886 aa25.12■■□□□ 1.61
C2CD4A-201ENST00000355522 CCER1Q8TC90 406 aaPredicted RBP25.1■■□□□ 1.61
C2CD4A-201ENST00000355522 NEUROD1Q13562 356 aa25.09■■□□□ 1.61
C2CD4A-201ENST00000355522 CCDC180Q9P1Z9 1646 aa25.07■■□□□ 1.6
C2CD4A-201ENST00000355522 ACIN1Q9UKV3 1341 aaKnown RBP25.07■■□□□ 1.6
C2CD4A-201ENST00000355522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.05■■□□□ 1.6
C2CD4A-201ENST00000355522 CENPBP07199 599 aaPredicted RBP25.05■■□□□ 1.6
C2CD4A-201ENST00000355522 YTHDC1Q96MU7 727 aaKnown RBP24.99■■□□□ 1.59
C2CD4A-201ENST00000355522 MYT1Q01538 1121 aa24.98■■□□□ 1.59
C2CD4A-201ENST00000355522 SCRIBQ14160 1630 aa24.89■■□□□ 1.58
C2CD4A-201ENST00000355522 DIEXFQ68CQ4 756 aaKnown RBP24.87■■□□□ 1.57
C2CD4A-201ENST00000355522 ABCC9O60706 1549 aa24.81■■□□□ 1.56
C2CD4A-201ENST00000355522 RANGAP1P46060 587 aaPredicted RBP24.75■■□□□ 1.55
C2CD4A-201ENST00000355522 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
C2CD4A-201ENST00000355522 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
C2CD4A-201ENST00000355522 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
C2CD4A-201ENST00000355522 UBTFP17480 764 aaKnown RBP24.4■■□□□ 1.5
C2CD4A-201ENST00000355522 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
C2CD4A-201ENST00000355522 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
C2CD4A-201ENST00000355522 HNRNPUL2Q1KMD3 747 aaKnown RBP24.22■■□□□ 1.47
C2CD4A-201ENST00000355522 MROH2BQ7Z745 1585 aa24.19■■□□□ 1.46
C2CD4A-201ENST00000355522 MIER1Q8N108 512 aa24.17■■□□□ 1.46
C2CD4A-201ENST00000355522 WIZO95785 1651 aa24.05■■□□□ 1.44
C2CD4A-201ENST00000355522 ABCC8Q09428 1581 aa23.98■■□□□ 1.43
C2CD4A-201ENST00000355522 SOGA1O94964 1423 aa23.9■■□□□ 1.42
C2CD4A-201ENST00000355522 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
C2CD4A-201ENST00000355522 BCANQ96GW7 911 aa23.84■■□□□ 1.41
C2CD4A-201ENST00000355522 RUSC2Q8N2Y8 1516 aa23.81■■□□□ 1.4
C2CD4A-201ENST00000355522 CSRNP3Q8WYN3 585 aa23.81■■□□□ 1.4
C2CD4A-201ENST00000355522 ITGAEP38570 1179 aa23.8■■□□□ 1.4
C2CD4A-201ENST00000355522 APLP2Q06481 763 aa23.75■■□□□ 1.39
C2CD4A-201ENST00000355522 CEP162Q5TB80 1403 aa23.7■■□□□ 1.38
C2CD4A-201ENST00000355522 SUPT16HQ9Y5B9 1047 aaKnown RBP23.68■■□□□ 1.38
C2CD4A-201ENST00000355522 BCL11AQ9H165 835 aa23.64■■□□□ 1.37
C2CD4A-201ENST00000355522 ANP32EQ9BTT0 268 aa23.62■■□□□ 1.37
C2CD4A-201ENST00000355522 TSHZ2Q9NRE2 1034 aa23.53■■□□□ 1.36
C2CD4A-201ENST00000355522 ATP1B4Q9UN42 357 aaPredicted RBP23.53■■□□□ 1.36
C2CD4A-201ENST00000355522 NACADO15069 1562 aa23.52■■□□□ 1.36
C2CD4A-201ENST00000355522 FKBP8Q14318 412 aa23.4■■□□□ 1.34
C2CD4A-201ENST00000355522 BAZ1AQ9NRL2 1556 aaPredicted RBP23.4■■□□□ 1.34
C2CD4A-201ENST00000355522 NEFLP07196 543 aa23.39■■□□□ 1.33
C2CD4A-201ENST00000355522 ERICH6Q7L0X2 663 aa23.34■■□□□ 1.33
C2CD4A-201ENST00000355522 TNIKQ9UKE5 1360 aa23.33■■□□□ 1.33
C2CD4A-201ENST00000355522 P3H3Q8IVL6 736 aa23.3■■□□□ 1.32
C2CD4A-201ENST00000355522 WRNQ14191 1432 aaPredicted RBP eCLIP23.29■■□□□ 1.32
C2CD4A-201ENST00000355522 CLSPNQ9HAW4 1339 aa23.28■■□□□ 1.32
C2CD4A-201ENST00000355522 KCNH8Q96L42 1107 aa23.27■■□□□ 1.32
C2CD4A-201ENST00000355522 CLIP1P30622 1438 aa23.26■■□□□ 1.31
C2CD4A-201ENST00000355522 HIRIP3Q9BW71 556 aaPredicted RBP23.24■■□□□ 1.31
C2CD4A-201ENST00000355522 KANK4Q5T7N3 995 aaPredicted RBP23.24■■□□□ 1.31
C2CD4A-201ENST00000355522 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
C2CD4A-201ENST00000355522 TOP2AP11388 1531 aaKnown RBP23.2■■□□□ 1.3
C2CD4A-201ENST00000355522 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
C2CD4A-201ENST00000355522 GOLGA3Q08378 1498 aa23.17■■□□□ 1.3
C2CD4A-201ENST00000355522 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
C2CD4A-201ENST00000355522 DDX10Q13206 875 aaKnown RBP23.13■■□□□ 1.29
C2CD4A-201ENST00000355522 RAPGEF2Q9Y4G8 1499 aa23.12■■□□□ 1.29
C2CD4A-201ENST00000355522 RBM19Q9Y4C8 960 aaKnown RBP23.1■■□□□ 1.29
C2CD4A-201ENST00000355522 FAM50AQ14320 339 aaKnown RBP23.06■■□□□ 1.28
C2CD4A-201ENST00000355522 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
C2CD4A-201ENST00000355522 IRX6P78412 446 aaPredicted RBP23■■□□□ 1.27
C2CD4A-201ENST00000355522 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
C2CD4A-201ENST00000355522 CNGB1Q14028 1251 aaPredicted RBP22.95■■□□□ 1.26
C2CD4A-201ENST00000355522 CEP164Q9UPV0 1460 aa22.94■■□□□ 1.26
C2CD4A-201ENST00000355522 SIN3AQ96ST3 1273 aa22.93■■□□□ 1.26
C2CD4A-201ENST00000355522 BAZ1BQ9UIG0 1483 aaKnown RBP22.91■■□□□ 1.26
C2CD4A-201ENST00000355522 ARID3CA6NKF2 412 aa22.9■■□□□ 1.26
C2CD4A-201ENST00000355522 VPS8Q8N3P4 1428 aa22.89■■□□□ 1.25
C2CD4A-201ENST00000355522 EEA1Q15075 1411 aa22.87■■□□□ 1.25
C2CD4A-201ENST00000355522 DHX57Q6P158 1386 aaKnown RBP22.86■■□□□ 1.25
C2CD4A-201ENST00000355522 CDK11AQ9UQ88 783 aaPredicted RBP22.85■■□□□ 1.25
C2CD4A-201ENST00000355522 ANP32CO43423 234 aa22.84■■□□□ 1.25
C2CD4A-201ENST00000355522 UNC13AQ9UPW8 1703 aa22.83■■□□□ 1.25
C2CD4A-201ENST00000355522 ATAD2BQ9ULI0 1458 aa22.79■■□□□ 1.24
C2CD4A-201ENST00000355522 NBR1Q14596 966 aa22.73■■□□□ 1.23
C2CD4A-201ENST00000355522 HNRNPUQ00839 825 aaKnown RBP eCLIP22.72■■□□□ 1.23
C2CD4A-201ENST00000355522 MSH5O43196 834 aa22.71■■□□□ 1.23
C2CD4A-201ENST00000355522 KIF21BO75037 1637 aa22.71■■□□□ 1.23
C2CD4A-201ENST00000355522 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.22
C2CD4A-201ENST00000355522 SENP3-EIF4A1A0A087X0R7 540 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms