RNA–Protein interactions for RNA: ENST00000350437.8

DDX11-202, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,724 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-202ENST00000350437 DDRGK1Q96HY6 314 aa13.1□□□□□ -0.31
DDX11-202ENST00000350437 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
DDX11-202ENST00000350437 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
DDX11-202ENST00000350437 BIVM-ERCC5R4GMW8 1640 aa13.08□□□□□ -0.32
DDX11-202ENST00000350437 CNTLNQ9NXG0 1405 aa13.06□□□□□ -0.32
DDX11-202ENST00000350437 HSP90AA2PQ14568 343 aaPredicted RBP13.05□□□□□ -0.32
DDX11-202ENST00000350437 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
DDX11-202ENST00000350437 AAMPQ13685 434 aa13.04□□□□□ -0.32
DDX11-202ENST00000350437 RRAGDQ9NQL2 400 aaPredicted RBP13.04□□□□□ -0.32
DDX11-202ENST00000350437 FGD5Q6ZNL6 1462 aa13.04□□□□□ -0.32
DDX11-202ENST00000350437 PLPPR3Q6T4P5 718 aa13.04□□□□□ -0.32
DDX11-202ENST00000350437 TOPBP1Q92547 1522 aa13.04□□□□□ -0.32
DDX11-202ENST00000350437 URB2Q14146 1524 aaKnown RBP13.04□□□□□ -0.32
DDX11-202ENST00000350437 PLIN1O60240 522 aa13.03□□□□□ -0.32
DDX11-202ENST00000350437 TMC1Q8TDI8 760 aa13.03□□□□□ -0.32
DDX11-202ENST00000350437 RRP1P56182 461 aaKnown RBP13.02□□□□□ -0.32
DDX11-202ENST00000350437 FOXD1Q16676 465 aa13.02□□□□□ -0.33
DDX11-202ENST00000350437 FHAD1B1AJZ9 1412 aa13.02□□□□□ -0.33
DDX11-202ENST00000350437 DNMBPQ6XZF7 1577 aa13.01□□□□□ -0.33
DDX11-202ENST00000350437 KIF21AQ7Z4S6 1674 aa13.01□□□□□ -0.33
DDX11-202ENST00000350437 ZNF326Q5BKZ1 582 aaKnown RBP13.01□□□□□ -0.33
DDX11-202ENST00000350437 CHIC2Q9UKJ5 165 aa13.01□□□□□ -0.33
DDX11-202ENST00000350437 HSP90AA1P07900 732 aaKnown RBP13□□□□□ -0.33
DDX11-202ENST00000350437 POGKQ9P215 609 aa13□□□□□ -0.33
DDX11-202ENST00000350437 ARHGAP35Q9NRY4 1499 aa13□□□□□ -0.33
DDX11-202ENST00000350437 CCDC7Q96M83 1385 aa13□□□□□ -0.33
DDX11-202ENST00000350437 PNNQ9H307 717 aaKnown RBP13□□□□□ -0.33
DDX11-202ENST00000350437 RRP7BPQ9NSQ0 103 aa13□□□□□ -0.33
DDX11-202ENST00000350437 RCAN3Q9UKA8 241 aa12.99□□□□□ -0.33
DDX11-202ENST00000350437 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
DDX11-202ENST00000350437 POLA1P09884 1462 aaPredicted RBP12.99□□□□□ -0.33
DDX11-202ENST00000350437 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
DDX11-202ENST00000350437 MS4A1P11836 297 aa12.98□□□□□ -0.33
DDX11-202ENST00000350437 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
DDX11-202ENST00000350437 RGS3P49796 1198 aa12.97□□□□□ -0.33
DDX11-202ENST00000350437 RNF123Q5XPI4 1314 aa12.97□□□□□ -0.33
DDX11-202ENST00000350437 KIF27Q86VH2 1401 aa12.97□□□□□ -0.33
DDX11-202ENST00000350437 KIF7Q2M1P5 1343 aa12.97□□□□□ -0.33
DDX11-202ENST00000350437 TULP1O00294 542 aaPredicted RBP12.96□□□□□ -0.33
DDX11-202ENST00000350437 SLKQ9H2G2 1235 aaPredicted RBP12.96□□□□□ -0.33
DDX11-202ENST00000350437 MRC2Q9UBG0 1479 aa12.96□□□□□ -0.34
DDX11-202ENST00000350437 CCDC18Q5T9S5 1454 aa12.95□□□□□ -0.34
DDX11-202ENST00000350437 PRXQ9BXM0 1461 aa12.95□□□□□ -0.34
DDX11-202ENST00000350437 GZF1Q9H116 711 aaPredicted RBP12.95□□□□□ -0.34
DDX11-202ENST00000350437 LRRC9Q6ZRR7 1453 aa12.94□□□□□ -0.34
DDX11-202ENST00000350437 ZNF777Q9ULD5 760 aaPredicted RBP12.93□□□□□ -0.34
DDX11-202ENST00000350437 CRBNQ96SW2 442 aa12.93□□□□□ -0.34
DDX11-202ENST00000350437 PAXIP1Q6ZW49 1069 aaPredicted RBP12.92□□□□□ -0.34
DDX11-202ENST00000350437 HOMEZQ8IX15 550 aa12.92□□□□□ -0.34
DDX11-202ENST00000350437 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
DDX11-202ENST00000350437 TDRD9Q8NDG6 1382 aaKnown RBP12.9□□□□□ -0.34
DDX11-202ENST00000350437 DHX37Q8IY37 1157 aaKnown RBP12.9□□□□□ -0.34
DDX11-202ENST00000350437 AQRO60306 1485 aaKnown RBP eCLIP12.89□□□□□ -0.353e-7■■■■■ 36.3
DDX11-202ENST00000350437 IGF1RP08069 1367 aa12.89□□□□□ -0.35
DDX11-202ENST00000350437 TIAM1Q13009 1591 aa12.89□□□□□ -0.35
DDX11-202ENST00000350437 UACAQ9BZF9 1416 aa12.89□□□□□ -0.35
DDX11-202ENST00000350437 NBPF8Q3BBV2 869 aa12.89□□□□□ -0.35
DDX11-202ENST00000350437 ABCA10Q8WWZ4 1543 aa12.89□□□□□ -0.35
DDX11-202ENST00000350437 PNISRQ8TF01 805 aaKnown RBP12.88□□□□□ -0.35
DDX11-202ENST00000350437 RRP9O43818 475 aaKnown RBP12.88□□□□□ -0.35
DDX11-202ENST00000350437 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
DDX11-202ENST00000350437 NCOA2Q15596 1464 aa12.88□□□□□ -0.35
DDX11-202ENST00000350437 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
DDX11-202ENST00000350437 PANK2Q9BZ23 570 aa12.87□□□□□ -0.35
DDX11-202ENST00000350437 ERICH3Q5RHP9 1530 aa12.87□□□□□ -0.35
DDX11-202ENST00000350437 NCOA1Q15788 1441 aa12.87□□□□□ -0.35
DDX11-202ENST00000350437 L1TD1Q5T7N2 865 aaKnown RBP12.86□□□□□ -0.35
DDX11-202ENST00000350437 ARID3AQ99856 593 aa12.86□□□□□ -0.35
DDX11-202ENST00000350437 WDR62O43379 1518 aa12.85□□□□□ -0.35
DDX11-202ENST00000350437 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
DDX11-202ENST00000350437 C20orf194Q5TEA3 1177 aa12.85□□□□□ -0.35
DDX11-202ENST00000350437 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.36
DDX11-202ENST00000350437 PTPRKQ15262 1439 aa12.83□□□□□ -0.36
DDX11-202ENST00000350437 CARMIL1Q5VZK9 1371 aa12.83□□□□□ -0.36
DDX11-202ENST00000350437 CHMP4AQ9BY43 222 aa12.83□□□□□ -0.36
DDX11-202ENST00000350437 GOLGA6L3A6NEY3 463 aa12.82□□□□□ -0.36
DDX11-202ENST00000350437 THOC2Q8NI27 1593 aaKnown RBP12.82□□□□□ -0.36
DDX11-202ENST00000350437 MTUS2Q5JR59 1369 aa12.81□□□□□ -0.36
DDX11-202ENST00000350437 BRD2P25440 801 aaKnown RBP12.81□□□□□ -0.36
DDX11-202ENST00000350437 XRCC6P12956 609 aaKnown RBP eCLIP12.8□□□□□ -0.36
DDX11-202ENST00000350437 GAPVD1Q14C86 1478 aa12.8□□□□□ -0.36
DDX11-202ENST00000350437 C8orf34Q49A92 452 aa12.8□□□□□ -0.36
DDX11-202ENST00000350437 FMN1Q68DA7 1419 aa12.8□□□□□ -0.36
DDX11-202ENST00000350437 MPHOSPH9Q99550 1183 aa12.8□□□□□ -0.36
DDX11-202ENST00000350437 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
DDX11-202ENST00000350437 MAP3K1Q13233 1512 aa12.79□□□□□ -0.36
DDX11-202ENST00000350437 IFT140Q96RY7 1462 aa12.78□□□□□ -0.36
DDX11-202ENST00000350437 KDM5BQ9UGL1 1544 aa12.78□□□□□ -0.36
DDX11-202ENST00000350437 ZNF608Q9ULD9 1512 aaPredicted RBP12.78□□□□□ -0.36
DDX11-202ENST00000350437 FHOD3Q2V2M9 1422 aa12.78□□□□□ -0.36
DDX11-202ENST00000350437 FGD6Q6ZV73 1430 aa12.78□□□□□ -0.36
DDX11-202ENST00000350437 HFM1A2PYH4 1435 aa12.78□□□□□ -0.36
DDX11-202ENST00000350437 CLCN1P35523 988 aa12.77□□□□□ -0.36
DDX11-202ENST00000350437 NAIPQ13075 1403 aa12.77□□□□□ -0.36
DDX11-202ENST00000350437 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
DDX11-202ENST00000350437 DHX29Q7Z478 1369 aaKnown RBP12.76□□□□□ -0.37
DDX11-202ENST00000350437 KTN1Q86UP2 1357 aaKnown RBP12.76□□□□□ -0.37
DDX11-202ENST00000350437 BECN1Q14457 450 aa12.75□□□□□ -0.37
DDX11-202ENST00000350437 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
DDX11-202ENST00000350437 ABCA5Q8WWZ7 1642 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms